| Definition | Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete genome. |
|---|---|
| Accession | NC_012751 |
| Length | 2,110,331 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 988285..988506 | PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; HDEF_0998; phage(gi169257287) | 3e-06 | Click |
| 2 | complement(989003..989407) | ISHde1, transposase orfB; HDEF_1000 | N/A | Click |
| 3 | complement(989448..989825) | ISHde1, transposase orfA; HDEF_1001 | N/A | Click |
| 4 | 990267..990632 | PHAGE_Bacter_2: lambda-like group I holin; HDEF_1003; phage(gi212499715) | 9e-05 | Click |
| 5 | 990872..991954 | PHAGE_Klebsi_phiKO2: putative DNA adenine methylase; HDEF_1005; phage(gi46402138) | 7e-113 | Click |
| 6 | 992025..992213 | PHAGE_Bacter_2: phage 21-like group II holin; HDEF_1006; phage(gi212499716) | 4e-09 | Click |
| 7 | 992210..992707 | PHAGE_Bacter_2: lysozyme; HDEF_1007; phage(gi212499717) | 2e-54 | Click |
| 8 | complement(992826..993689) | hypothetical protein; HDEF_1008 | N/A | Click |
| 9 | 993779..993952 | hypothetical protein; HDEF_1009 | N/A | Click |
| 10 | 993985..994455 | PHAGE_Salmon_vB_SosS_Oslo: endopeptidase; HDEF_1010; phage(gi399528835) | 4e-25 | Click |
| 11 | 994436..994780 | PHAGE_Entero_phiP27: hypothetical protein P27p34; HDEF_1011; phage(gi18249898) | 1e-40 | Click |
| 12 | 994617..994841 | hypothetical protein; HDEF_1012 | N/A | Click |
| 13 | complement(994782..995105) | addiction module antitoxin; HDEF_1013 | N/A | Click |
| 14 | complement(995109..995435) | PHAGE_Burkho_2: gp7, putative addiction module killer protein; HDEF_1014; phage(gi134288691) | 3e-15 | Click |
| 15 | 995635..996267 | PHAGE_Entero_mEp235: terminase small subunit; HDEF_1015; phage(gi428781811) | 4e-34 | Click |
| 16 | complement(996298..996579) | PROPHAGE_Shewan_MR-1: ISSod6, transposase; HDEF_1016; phage(gi24374783) | 5e-05 | Click |
| 17 | complement(996720..997085) | PROPHAGE_Shewan_MR-1: ISSod6, transposase; HDEF_1017; phage(gi24374783) | 1e-13 | Click |
Region 2, total : 22 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1322484..1323347) | PHAGE_Entero_SfV: capsid; HDEF_1439; phage(gi19548995) | 2e-109 | Click |
| 2 | complement(1323358..1323957) | PHAGE_Entero_SfV: capsid protease; HDEF_1440; phage(gi19548994) | 5e-82 | Click |
| 3 | complement(1323950..1325188) | PHAGE_Entero_SfV: portal protein; HDEF_1441; phage(gi19548993) | 0.0 | Click |
| 4 | complement(1325178..1325339) | hypothetical protein; HDEF_1442 | N/A | Click |
| 5 | 1325398..1325775 | ISHde1, transposase orfA; HDEF_1443 | N/A | Click |
| 6 | 1325816..1326220 | ISHde1, transposase orfB; HDEF_1444 | N/A | Click |
| 7 | complement(1326240..1327997) | PHAGE_Entero_SfV: large terminase subunit; HDEF_1445; phage(gi19548992) | 3e-95 | Click |
| 8 | complement(1327997..1328473) | PHAGE_Entero_SfV: small terminase subunit; HDEF_1446; phage(gi19548991) | 1e-07 | Click |
| 9 | 1328688..1328945 | addiction module antitoxin; HDEF_1447 | N/A | Click |
| 10 | 1328932..1329213 | addiction module toxin; HDEF_1448 | N/A | Click |
| 11 | 1329256..1329705 | hypothetical protein; HDEF_1449 | N/A | Click |
| 12 | complement(1329503..1329916) | hypothetical protein; HDEF_1450 | N/A | Click |
| 13 | complement(1329917..1330285) | PHAGE_Entero_SfV: hypothetical protein SfVp53; HDEF_1451; phage(gi19549040) | 2e-37 | Click |
| 14 | complement(1330266..1330595) | hypothetical protein; HDEF_1452 | N/A | Click |
| 15 | complement(1330612..1330920) | PHAGE_Entero_ST104: ORF8; HDEF_1453; phage(gi46358656) | 5e-06 | Click |
| 16 | complement(1330917..1331246) | hypothetical protein; HDEF_1454 | N/A | Click |
| 17 | complement(1331233..1331730) | PHAGE_Sodali_phiSG1: putative phage endopeptidase; HDEF_1455; phage(gi89886017) | 6e-25 | Click |
| 18 | complement(1331730..1332440) | PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; HDEF_1456; phage(gi399528836) | 1e-58 | Click |
| 19 | complement(1332792..1332998) | hypothetical protein; HDEF_1457 | N/A | Click |
| 20 | complement(1333020..1333547) | PHAGE_Escher_P13374: antirepressor; HDEF_1458; phage(gi410491647) | 9e-73 | Click |
| 21 | complement(1333722..1334219) | PHAGE_Bacter_2: lysozyme; HDEF_1459; phage(gi212499717) | 7e-53 | Click |
| 22 | complement(1334212..1334403) | PHAGE_Bacter_2: phage 21-like group II holin; HDEF_1460; phage(gi212499716) | 2e-09 | Click |
Region 3, total : 28 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1426317..1426487) | PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; HDEF_1565; phage(gi16129505) | 3e-08 | Click |
| 2 | 1426452..1426616 | hypothetical protein; HDEF_1564 | N/A | Click |
| 3 | complement(1426682..1427092) | PROPHAGE_Xylell_Temecula1: phage-related tail protein; HDEF_1566; phage(gi28198980) | 2e-08 | Click |
| 4 | complement(1427109..1427219) | hypothetical protein; HDEF_1567 | N/A | Click |
| 5 | complement(1427528..1428004) | putative glycosy hydrolase family protein; HDEF_1568 | N/A | Click |
| 6 | 1428064..1428276 | hypothetical protein; HDEF_1569 | N/A | Click |
| 7 | 1428335..1428634 | PHAGE_Entero_Sf6: gene 56 protein; HDEF_1570; phage(gi41057344) | 2e-14 | Click |
| 8 | 1428644..1428763 | hypothetical protein; HDEF_1571 | N/A | Click |
| 9 | 1429030..1429653 | PHAGE_Edward_MSW_3: hypothetical protein; HDEF_1572; phage(gi448261087) | 2e-14 | Click |
| 10 | 1429149..1429161 | attL ACTGCGTCTACCA | N/A | Click |
| 11 | complement(1429674..1430006) | hypothetical protein; HDEF_1573 | N/A | Click |
| 12 | complement(1430041..1430268) | PHAGE_Entero_mEpX1: putative replication protein DnaC; HDEF_1574; phage(gi428781919) | 1e-06 | Click |
| 13 | 1430629..1431237 | PHAGE_Entero_ST104: CI; HDEF_1575; phage(gi46358671) | 1e-14 | Click |
| 14 | 1431667..1431780 | hypothetical protein; HDEF_1576 | N/A | Click |
| 15 | complement(1431886..1432347) | PHAGE_Acyrth_1: hypothetical protein APSE-1_47; HDEF_1577; phage(gi9633594) | 3e-43 | Click |
| 16 | complement(1432417..1432569) | hypothetical protein; HDEF_1578 | N/A | Click |
| 17 | 1432581..1432679 | hypothetical protein; HDEF_1579 | N/A | Click |
| 18 | 1432676..1433047 | PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p08; HDEF_1580; phage(gi31544005) | 1e-14 | Click |
| 19 | 1433089..1433199 | hypothetical protein; HDEF_1581 | N/A | Click |
| 20 | 1433199..1433462 | PHAGE_Entero_mEp235: integrase; HDEF_1582; phage(gi428781836) | 8e-17 | Click |
| 21 | complement(1434449..1434766) | PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; HDEF_1584; phage(gi31544013) | 2e-13 | Click |
| 22 | complement(1434884..1435654) | PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; HDEF_1585; phage(gi31544021) | 1e-31 | Click |
| 23 | complement(1435758..1435850) | hypothetical protein; HDEF_1586 | N/A | Click |
| 24 | complement(1435932..1436723) | PHAGE_Vibrio_ICP1: putative antirepressor protein; HDEF_1587; phage(gi325171055) | 5e-19 | Click |
| 25 | complement(1436911..1437288) | hypothetical protein; HDEF_1588 | N/A | Click |
| 26 | complement(1437531..1438046) | PHAGE_Prochl_P_HM2: hypothetical protein; HDEF_1589; phage(gi326783198) | 1e-06 | Click |
| 27 | complement(1438074..1438208) | hypothetical protein; HDEF_1590 | N/A | Click |
| 28 | complement(1438202..1438729) | PHAGE_Xantho_CP2: hypothetical protein; HDEF_1591; phage(gi448245207) | 3e-19 | Click |
| 29 | 1439490..1442108 | PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; HDEF_1592; phage(gi423261981) | 1e-26 | Click |
| 30 | 1443634..1443646 | attR ACTGCGTCTACCA | N/A | Click |
Region 4, total : 56 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1498612..1498623 | attL TATAAAAAATTA | N/A | Click |
| 2 | complement(1498879..1500024) | PHAGE_Bacter_2: integrase; integrase;; phage HDEF_1648(gi212499734) | 0.0 | Click |
| 3 | complement(1499880..1500260) | PHAGE_Bacter_2: excisionase; HDEF_1649; phage(gi212499735) | 4e-68 | Click |
| 4 | complement(1500475..1501857) | PHAGE_Bacter_2: DEAD box helicase; DEAD; phage box helicase; HDEF_1650(gi212499736) | 0.0 | Click |
| 5 | complement(1501877..1502623) | PHAGE_Bacter_2: DNA binding protein Roi; DNA; phage binding protein Roi; HDEF_1651(gi212499737) | 6e-141 | Click |
| 6 | complement(1502689..1503462) | PHAGE_Bacter_2: hypothetical protein APSE233; hypothetical; phage / Antirepressor; HDEF_1652(gi212499738) | 1e-149 | Click |
| 7 | complement(1503767..1504570) | PHAGE_Bacter_2: conserved hypothetical protein G; hypothetical; phage protein; HDEF_1653(gi212499739) | 8e-151 | Click |
| 8 | complement(1504982..1505266) | PHAGE_Bacter_2: hypothetical protein APSE235; hypothetical; phage protein; HDEF_1654(gi212499740) | 4e-49 | Click |
| 9 | complement(1505501..1508482) | PHAGE_Bacter_2: DNA polymerase; DNA; phage polymerase; HDEF_1655(gi212499741) | 0.0 | Click |
| 10 | complement(1508495..1508842) | PHAGE_Bacter_2: hypothetical protein I; hypothetical; phage protein; HDEF_1656(gi212499742) | 1e-59 | Click |
| 11 | 1508918..1509283 | PHAGE_Acyrth_1: hypothetical protein APSE-1_47; hypothetical;; phage HDEF_1657(gi9633594) | 7e-43 | Click |
| 12 | 1509291..1509365 | tRNA | N/A | Click |
| 13 | 1509471..1509482 | attL GCATAACCCTGT | N/A | Click |
| 14 | complement(1509643..1510197) | PHAGE_Bacter_2: hypothetical protein APSE240; hypothetical;; phage HDEF_1660(gi212499744) | 8e-105 | Click |
| 15 | complement(1510213..1511532) | PHAGE_Bacter_2: hypothetical protein APSE241; hypothetical;; phage HDEF_1661(gi212499745) | 0.0 | Click |
| 16 | complement(1511504..1512421) | PHAGE_Bacter_2: hypothetical protein APSE242; hypothetical;; phage HDEF_1662(gi212499746) | 6e-172 | Click |
| 17 | complement(1512986..1513768) | PHAGE_Bacter_2: cI; cI;; phage HDEF_1663(gi212499706) | 1e-132 | Click |
| 18 | 1513780..1514064 | PHAGE_Bacter_2: cro; HDEF_1664; phage(gi212499707) | 4e-47 | Click |
| 19 | 1514068..1516305 | PHAGE_Bacter_2: predicted P-loop ATPase; predicted; phage P-loop ATPase; HDEF_1665(gi212499708) | 0.0 | Click |
| 20 | 1516409..1516630 | PHAGE_Bacter_2: hypothetical protein APSE204; HDEF_1666; phage(gi212499709) | 1e-37 | Click |
| 21 | 1516757..1517203 | PHAGE_Bacter_2: Q protein; Q; phage protein; HDEF_1667(gi212499710) | 2e-81 | Click |
| 22 | 1517574..1517738 | PHAGE_Bacter_2: hypothetical protein B; HDEF_1668; phage(gi212499712) | 5e-11 | Click |
| 23 | 1517900..1518304 | PHAGE_Bacter_2: hypothetical protein A; HDEF_1669; phage(gi212499711) | 2e-75 | Click |
| 24 | 1518686..1519063 | PHAGE_Bacter_2: hypothetical protein B; hypothetical; phage protein; HDEF_1670(gi212499712) | 1e-69 | Click |
| 25 | 1519315..1520304 | PHAGE_Bacter_2: cytolethal distending toxin subunit B; cytolethal; phage distending toxin subunit B; HDEF_1671(gi212499713) | 0.0 | Click |
| 26 | 1520562..1521326 | PHAGE_Bacter_2: hypothetical protein D; hypothetical; phage protein; HDEF_1672(gi212499714) | 2e-154 | Click |
| 27 | 1521673..1521684 | attL ATTTACCCTGCT | N/A | Click |
| 28 | 1521834..1522112 | PHAGE_Bacter_2: lambda-like group I holin; Lambda-like; phage group I holin; HDEF_1673(gi212499715) | 1e-48 | Click |
| 29 | 1522309..1522536 | PHAGE_Bacter_2: phage 21-like group II holin; HDEF_1674; phage(gi212499716) | 9e-40 | Click |
| 30 | 1522499..1522963 | PHAGE_Bacter_2: lysozyme; lysozyme;; phage HDEF_1675(gi212499717) | 2e-85 | Click |
| 31 | 1522968..1523354 | PHAGE_Bacter_2: hypothetical protein APSE213; hypothetical; phage protein; HDEF_1676(gi212499718) | 2e-67 | Click |
| 32 | 1523173..1523502 | PHAGE_Bacter_2: hypothetical protein APSE214; hypothetical; phage protein; HDEF_1677(gi212499719) | 5e-60 | Click |
| 33 | 1523576..1523992 | PHAGE_Bacter_2: hypothetical protein APSE215; hypothetical; phage protein; HDEF_1678(gi212499720) | 7e-73 | Click |
| 34 | 1524009..1525418 | PHAGE_Bacter_2: terminase; terminase;; phage HDEF_1679(gi212499721) | 0.0 | Click |
| 35 | 1525418..1527580 | PHAGE_Bacter_2: portal protein; portal; phage protein; HDEF_1680(gi212499722) | 0.0 | Click |
| 36 | 1527631..1528527 | PHAGE_Bacter_2: scaffold protein gp8; scaffold; phage protein, gp8; HDEF_1681(gi212499723) | 3e-170 | Click |
| 37 | 1528538..1529809 | PHAGE_Bacter_2: head protein; conserved; phage APSE major head protein; HDEF_1682(gi212499724) | 0.0 | Click |
| 38 | 1530029..1530511 | PHAGE_Bacter_2: DNA stabilization gp4; DNA; phage stabilization, gp4; HDEF_1683(gi212499725) | 2e-87 | Click |
| 39 | 1530483..1531898 | PHAGE_Bacter_2: DNA stabilization gp10; DNA; phage stabilization, gp10; HDEF_1684(gi212499726) | 0.0 | Click |
| 40 | 1531898..1532428 | PHAGE_Bacter_2: DNA stabilization gp26; DNA; phage stabilization, gp26; HDEF_1685(gi212499727) | 8e-93 | Click |
| 41 | 1532428..1532895 | PHAGE_Bacter_2: hypothetical protein APSE223; hypothetical; phage protein; HDEF_1686(gi212499728) | 3e-88 | Click |
| 42 | 1532873..1533502 | PHAGE_Bacter_2: injection gp7; transfer; phage protein gp7; HDEF_1687(gi212499729) | 1e-117 | Click |
| 43 | 1533515..1534903 | PHAGE_Bacter_2: injection gp20; transfer; phage protein gp20; HDEF_1688(gi212499730) | 0.0 | Click |
| 44 | 1534903..1536780 | PHAGE_Bacter_2: injection gp16; transfer; phage protein gp16; HDEF_1689(gi212499731) | 0.0 | Click |
| 45 | 1536809..1537837 | PHAGE_Bacter_2: tail spike gp9; tail; phage spike proptein gp9; HDEF_1690(gi212499732) | 0.0 | Click |
| 46 | 1537839..1538291 | PHAGE_Bacter_2: tail fiber; tail; phage fiber asembly protein; HDEF_1691(gi212499733) | 1e-86 | Click |
| 47 | complement(1538746..1539891) | PHAGE_Bacter_2: integrase; integrase;; phage HDEF_1693(gi212499734) | 7e-133 | Click |
| 48 | complement(1540111..1540584) | PHAGE_Strept_6: putative helicase; HDEF_1694; phage(gi28876470) | 8e-43 | Click |
| 49 | 1541856..1541999 | hypothetical protein; HDEF_1696 | N/A | Click |
| 50 | 1541987..1542256 | hypothetical protein; HDEF_1697 | N/A | Click |
| 51 | 1542365..1542511 | hypothetical protein; HDEF_1698 | N/A | Click |
| 52 | 1542832..1543176 | hypothetical protein; HDEF_1699 | N/A | Click |
| 53 | 1543367..1543852 | PHAGE_Pectob_phiTE: endolysin; HDEF_1700; phage(gi448244889) | 4e-36 | Click |
| 54 | 1543831..1544256 | hypothetical protein; HDEF_1701 | N/A | Click |
| 55 | 1544418..1544696 | PHAGE_Burkho_AH2: hypothetical protein; HDEF_1702; phage(gi399529082) | 3e-06 | Click |
| 56 | 1544693..1545226 | PHAGE_Escher_HK639: terminase small subunit; HDEF_1703; phage(gi356870601) | 4e-08 | Click |
| 57 | 1545210..1546649 | PHAGE_Aeromo_vB_AsaM_56: putative TerL large-subunit terminase; HDEF_1704; phage(gi422937532) | 2e-64 | Click |
| 58 | complement(1547123..1547527) | ISHde1, transposase orfB; HDEF_1706 | N/A | Click |
| 59 | 1547566..1547577 | attR ATTTACCCTGCT | N/A | Click |
| 60 | complement(1547568..1547945) | ISHde1, transposase orfA; HDEF_1707 | N/A | Click |
| 61 | 1549401..1549664 | PHAGE_Entero_HK630: integrase; HDEF_1710; phage(gi428782814) | 3e-17 | Click |
| 62 | 1559532..1559543 | attR GCATAACCCTGT | N/A | Click |
| 63 | 1562593..1562604 | attR TATAAAAAATTA | N/A | Click |
Region 5, total : 20 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1996160..1997080) | PHAGE_Erwini_ENT90: phage tail collar domain protein; HDEF_2201; phage(gi431810938) | 2e-26 | Click |
| 2 | complement(1997135..1997539) | ISHde1, transposase orfB; HDEF_2202 | N/A | Click |
| 3 | complement(1997580..1997957) | ISHde1, transposase orfA; HDEF_2203 | N/A | Click |
| 4 | complement(1998008..1998517) | PHAGE_Entero_P2: gpI; HDEF_2204; phage(gi9630345) | 4e-21 | Click |
| 5 | complement(1998519..1999400) | PHAGE_Entero_P2: gpJ; HDEF_2205; phage(gi9630344) | 3e-65 | Click |
| 6 | complement(1999397..1999732) | PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; HDEF_2206; phage(gi428782737) | 5e-29 | Click |
| 7 | complement(1999729..2000307) | PHAGE_Entero_P2: gpV; HDEF_2207; phage(gi9630342) | 4e-19 | Click |
| 8 | complement(2000304..2000807) | hypothetical protein; HDEF_2208 | N/A | Click |
| 9 | complement(2000835..2001284) | PHAGE_Escher_D108: virion morphogenesis protein; HDEF_2209; phage(gi281199674) | 8e-07 | Click |
| 10 | complement(2001284..2001712) | PHAGE_Rhodob_RcapMu: conserved phage protein; HDEF_2210; phage(gi356870882) | 3e-14 | Click |
| 11 | complement(2001719..2002003) | hypothetical protein; HDEF_2211 | N/A | Click |
| 12 | complement(2002005..2002787) | PHAGE_Rhodov_RS1: I protein; HDEF_2212; phage(gi472342914) | 6e-23 | Click |
| 13 | complement(2002914..2003213) | PHAGE_Burkho_2: gp6, putative addiction module antidote protein; HDEF_2213; phage(gi134288715) | 2e-14 | Click |
| 14 | complement(2003210..2003506) | PHAGE_Burkho_2: gp7, putative addiction module killer protein; HDEF_2214; phage(gi134288691) | 6e-17 | Click |
| 15 | complement(2003548..2003679) | hypothetical protein; HDEF_2215 | N/A | Click |
| 16 | complement(2003661..2004305) | PHAGE_Entero_Mu: virion morphogenesis late F orf; HDEF_2216; phage(gi9633521) | 6e-38 | Click |
| 17 | complement(2004305..2004751) | hypothetical protein; HDEF_2217 | N/A | Click |
| 18 | 2005353..2005448 | hypothetical protein; HDEF_2218 | N/A | Click |
| 19 | 2005583..2006317 | PHAGE_Microm_12T: hypothetical protein; HDEF_2219; phage(gi472342811) | 8e-06 | Click |
| 20 | complement(2006568..2007956) | PHAGE_Burkho_phi1026b: gp59; HDEF_2220; phage(gi38707949) | 7e-07 | Click |