Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 692659..692670  attL    AGCTATGCGCGG  N/A  Click
2 complement(692948..693997)  PHAGE_Mannhe_phiMHaA1: integrase; GBP346_A0729; phage(gi109289985)  2e-26  Click
3 complement(694141..694219)  tRNA  N/A  Click
4 complement(694256..694393)  hypothetical protein; GBP346_A0732  N/A  Click
5 complement(694460..696118)  PHAGE_Burkho_phi1026b: gp59; GBP346_A0733; phage(gi38707949)  3e-46  Click
6 complement(696341..697897)  PHAGE_Ectoca_1: EsV-1-65; GBP346_A0734; phage(gi13242537)  9e-12  Click
7 complement(697921..698742)  PHAGE_Ectoca_1: EsV-1-65; GBP346_A0735; phage(gi13242537)  5e-06  Click
8 698868..699938  PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; GBP346_A0736; phage(gi16130606)  2e-131  Click
9 699938..700921  PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; GBP346_A0737; phage(gi169257204)  6e-05  Click
10 701586..701597  attR    AGCTATGCGCGG  N/A  Click
Region 2, total : 34 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2625992..2626417  PHAGE_Burkho_phiE125: hypothetical protein phiE125p29; GBP346_A2686; phage(gi17975190)  2e-18  Click
2 2626414..2626920  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp02; GBP346_A2687; phage(gi145708076)  8e-20  Click
3 2626937..2627386  hypothetical protein; GBP346_A2688  N/A  Click
4 2627205..2627873  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp03; GBP346_A2689; phage(gi145708077)  5e-15  Click
5 2627885..2628595  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp04; GBP346_A2690; phage(gi145708078)  8e-40  Click
6 complement(2628636..2629424)  PHAGE_Burkho_phiE125: DNA adenine methylase; GBP346_A2691; phage(gi17975188)  6e-151  Click
7 complement(2629568..2630113)  PHAGE_Burkho_phiE125: hypothetical protein phiE125p26; GBP346_A2692; phage(gi17975187)  4e-93  Click
8 complement(2630113..2630610)  PHAGE_Burkho_2: gp25, phage lysozyme; GBP346_A2693; phage(gi134288680)  5e-69  Click
9 complement(2630603..2630797)  hypothetical protein; GBP346_A2694  N/A  Click
10 2631025..2631474  hypothetical protein; GBP346_A2695  N/A  Click
11 complement(2631606..2632658)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; GBP346_A2696; phage(gi428782753)  3e-43  Click
12 complement(2632668..2632883)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; GBP346_A2697; phage(gi428782752)  3e-07  Click
13 complement(2632849..2633730)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; GBP346_A2698; phage(gi428782751)  3e-14  Click
14 complement(2633739..2636153)  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; GBP346_A2699; phage(gi418489066)  5e-22  Click
15 complement(2636171..2636287)  hypothetical protein; GBP346_A2700  N/A  Click
16 complement(2636241..2636543)  hypothetical protein; GBP346_A2701  N/A  Click
17 complement(2636613..2637116)  PHAGE_Vibrio_vB_VpaM_MAR: tail tube protein; GBP346_A2702; phage(gi428782747)  9e-32  Click
18 complement(2637127..2638296)  PHAGE_Vibrio_vB_VpaM_MAR: tail sheath protein; GBP346_A2703; phage(gi428782746)  7e-82  Click
19 complement(2638362..2638814)  PHAGE_Entero_SfV: tail fibre assembly protein; GBP346_A2704; phage(gi19549010)  2e-14  Click
20 complement(2638830..2640293)  PROPHAGE_Salmon_Ty2: variable tail fiber protein; GBP346_A2705; phage(gi29143754)  3e-16  Click
21 complement(2640281..2640856)  PHAGE_Burkho_phiE255: gp25, tail fiber; GBP346_A2706; phage(gi134288819)  3e-33  Click
22 complement(2640849..2641742)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; GBP346_A2707; phage(gi109289956)  1e-46  Click
23 complement(2641739..2642083)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; GBP346_A2708; phage(gi428782737)  1e-14  Click
24 complement(2642080..2642286)  hypothetical protein; GBP346_A2709  N/A  Click
25 complement(2642351..2643031)  PHAGE_Burkho_phi52237: phage baseplate assembly protein; GBP346_A2710; phage(gi72537705)  3e-33  Click
26 complement(2643034..2643567)  hypothetical protein; GBP346_A2711  N/A  Click
27 complement(2643557..2644087)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; GBP346_A2712; phage(gi428782733)  4e-20  Click
28 complement(2644089..2644379)  hypothetical protein; GBP346_A2713  N/A  Click
29 complement(2644383..2645477)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; GBP346_A2714; phage(gi428782731)  6e-35  Click
30 complement(2645443..2645787)  hypothetical protein; GBP346_A2715  N/A  Click
31 complement(2645814..2646914)  PHAGE_Entero_mEp213: head maturation protease; GBP346_A2716; phage(gi428782594)  5e-38  Click
32 complement(2646911..2648404)  PHAGE_Vibrio_vB_VpaM_MAR: portal protein; GBP346_A2717; phage(gi428782728)  3e-80  Click
33 complement(2648401..2648607)  hypothetical protein; GBP346_A2718  N/A  Click
34 complement(2648618..2650729)  PHAGE_Vibrio_vB_VpaM_MAR: terminase large subunit; GBP346_A2719; phage(gi428782726)  3e-42  Click
Region 3, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3684549..3684560  attL    GCGCGGCCGCGA  N/A  Click
2 3685243..3685557  PHAGE_Burkho_2: gp7, putative addiction module killer protein; GBP346_A3824; phage(gi134288691)  4e-54  Click
3 3685554..3685916  PHAGE_Burkho_2: gp6, putative addiction module antidote protein; GBP346_A3825; phage(gi134288715)  4e-60  Click
4 complement(3685960..3687015)  PHAGE_Burkho_2: gp5, phage portal protein, pbsx family; GBP346_A3826; phage(gi134288732)  0.0  Click
5 3686970..3686981  attR    GCGCGGCCGCGA  N/A  Click
6 complement(3687012..3687509)  PHAGE_Burkho_2: gp4, phage terminase, ATPase subunit; GBP346_A3827; phage(gi134288710)  3e-57  Click
7 3687319..3687558  PHAGE_Xylell_Xfas53: integrase; GBP346_A3828; phage(gi273810420)  2e-08  Click
8 complement(3687635..3687710)  tRNA  N/A  Click
9 complement(3687731..3688240)  PROPHAGE_Escher_Sakai: ClpXP protease specificity-enhancing factor; GBP346_A3830; phage(gi15833355)  2e-23  Click