Definition Rhodococcus erythropolis PR4, complete genome.
Accession NC_012490
Length 6,516,310
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 30 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2445447..2445665  PHAGE_Mycoba_Rosebush: gp43; RER_22450; phage(gi29566236)  1e-07  Click
2 complement(2445731..2446978)  PHAGE_Strept_2: hypothetical protein SpyM3_0921; RER_22460; phage(gi28876205)  7e-06  Click
3 complement(2447222..2448280)  hypothetical protein; RER_22470  N/A  Click
4 complement(2448277..2450244)  PHAGE_Coryne_BFK20: gp21, tail fiber protein; RER_22480; phage(gi157168394)  9e-20  Click
5 complement(2450248..2450583)  PHAGE_Rhodoc_REQ3: hypothetical protein; RER_22490; phage(gi372450026)  5e-21  Click
6 complement(2450580..2450987)  PHAGE_Rhodoc_REQ3: hypothetical protein; RER_22500; phage(gi372450025)  1e-37  Click
7 complement(2451012..2451239)  PHAGE_Lactoc_r1t: Holin; RER_22510; phage(gi23455767)  3e-14  Click
8 complement(2451366..2452154)  PHAGE_Gordon_GTE2: putative lysin; RER_22520; phage(gi338826875)  4e-38  Click
9 complement(2452165..2453031)  hypothetical protein; RER_22530  N/A  Click
10 complement(2453031..2453474)  PHAGE_Gordon_GTE2: hypothetical protein; RER_22540; phage(gi338826874)  6e-07  Click
11 complement(2453476..2455158)  PHAGE_Rhodoc_RGL3: minor tail protein; RER_22550; phage(gi372449748)  4e-117  Click
12 complement(2455155..2456048)  PHAGE_Rhodoc_RGL3: minor tail protein; RER_22560; phage(gi372449747)  6e-25  Click
13 complement(2456033..2460877)  PHAGE_Mycoba_CrimD: gp21; RER_22570; phage(gi304360873)  9e-67  Click
14 complement(2460954..2461238)  hypothetical protein; RER_22580  N/A  Click
15 complement(2461382..2461849)  hypothetical protein; RER_22590  N/A  Click
16 complement(2461908..2462771)  PHAGE_Gordon_GTE2: main tail protein; RER_22600; phage(gi338826868)  4e-42  Click
17 complement(2462836..2463246)  PHAGE_Strept_VWB: ORF6; RER_22610; phage(gi41057258)  1e-05  Click
18 complement(2463243..2463485)  PHAGE_Gordon_GTE2: hypothetical protein; RER_22620; phage(gi338826866)  4e-05  Click
19 complement(2463457..2463687)  hypothetical protein; RER_22630  N/A  Click
20 complement(2463684..2464028)  hypothetical protein; RER_22640  N/A  Click
21 complement(2464028..2464414)  PHAGE_Mycoba_Halo: gp9; RER_22650; phage(gi109392296)  4e-20  Click
22 complement(2464424..2464729)  hypothetical protein; RER_22660  N/A  Click
23 complement(2464729..2465682)  PHAGE_Pseudo_tf: major head protein; RER_22670; phage(gi388604632)  8e-18  Click
24 complement(2465725..2466600)  PHAGE_Strept_SV1: hypothetical protein; RER_22680; phage(gi410491726)  1e-13  Click
25 complement(2466621..2466923)  hypothetical protein; RER_22690  N/A  Click
26 complement(2466983..2467234)  hypothetical protein; RER_22700  N/A  Click
27 complement(2467242..2467409)  hypothetical protein; RER_22710  N/A  Click
28 complement(2467462..2467755)  hypothetical protein; RER_22720  N/A  Click
29 complement(2467765..2469006)  PHAGE_Mycoba_Ramsey: gp5; RER_22730; phage(gi206600186)  2e-48  Click
30 complement(2468990..2470489)  PHAGE_Mycoba_BPs: portal protein; RER_22740; phage(gi189043090)  2e-82  Click
Region 2, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4351039..4351052  attL    GCGTCGTCGCCGAG  N/A  Click
2 4356423..4357193  PHAGE_Mycoba_Ardmore: gp60; RER_39710; phage(gi291084918)  1e-05  Click
3 4357190..4357504  hypothetical protein; RER_39720  N/A  Click
4 4358114..4358317  hypothetical protein; RER_39730  N/A  Click
5 4358322..4358609  hypothetical protein; RER_39740  N/A  Click
6 4358856..4359473  PHAGE_Mycoba_Brujita: gp6; RER_39750; phage(gi206599550)  1e-33  Click
7 4359489..4360910  PHAGE_Mycoba_Brujita: gp7; RER_39760; phage(gi206599551)  1e-68  Click
8 4361044..4361346  PHAGE_Strept_3: hypothetical protein SpyM3_1123; RER_39770; phage(gi28876293)  3e-07  Click
9 complement(4362147..4363667)  PHAGE_Strept_R4: recombinase, serine integrase type; RER_39780; phage(gi414090037)  1e-28  Click
10 4363683..4364603  PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; RER_39790; phage(gi326781942)  1e-07  Click
11 4373917..4373930  attR    GCGTCGTCGCCGAG  N/A  Click
Region 3, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4936069..4936093  attL    CAGGTTCGAATCCTGCCGAGGGCAC  N/A  Click
2 4938274..4938672  PHAGE_Chryso_nucleopolyhedrovirus: hoar peptide; RER_45030; phage(gi68304140)  9e-05  Click
3 4938794..4939660  PHAGE_Temper_1: major capsid protein; RER_45040; phage(gi16271809)  1e-12  Click
4 4940370..4940801  PHAGE_Mycoba_Llij: gp99; RER_45050; phage(gi109392285)  8e-11  Click
5 4941058..4941447  PHAGE_Mycoba_Omega: gp10; RER_45060; phage(gi29566747)  7e-05  Click
6 complement(4943099..4943923)  hypothetical protein; RER_45070  N/A  Click
7 complement(4943988..4944227)  PHAGE_Mycoba_D29: hypothetical protein D29p34; RER_45080; phage(gi9630420)  6e-10  Click
8 complement(4944344..4945468)  PHAGE_Mycoba_D29: gp33; RER_45090; phage(gi9630419)  8e-46  Click
9 4945592..4945616  attR    CAGGTTCGAATCCTGCCGAGGGCAC  N/A  Click