Definition Streptococcus pneumoniae JJA, complete genome.
Accession NC_012466
Length 2,120,234
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 20366..20377  attL    TTTTGTGTTATA  N/A  Click
2 complement(21303..21509)  PROPHAGE_Staphy_N315: transposase; SPJ_0023; phage(gi15927655)  5e-05  Click
3 complement(21652..21795)  transposase; SPJ_0025  N/A  Click
4 complement(21843..22049)  transposase; SPJ_0026  N/A  Click
5 22366..22602  hypothetical protein; SPJ_0027  N/A  Click
6 22791..24119  PHAGE_Megavi_lba: adenylosuccinate synthetase; SPJ_0028; phage(gi448826112)  3e-72  Click
7 24320..24787  PHAGE_Microm_MpV1: hypothetical protein; SPJ_0029; phage(gi313768407)  2e-07  Click
8 complement(24996..25712)  PHAGE_Strept_MM1: integrase; SPJ_0030; phage(gi15088744)  2e-42  Click
9 complement(25784..26137)  PHAGE_Strept_MM1: integrase; SPJ_0031; phage(gi15088744)  1e-34  Click
10 complement(26192..27262)  prophage Lp2 protein 6; SPJ_0032  N/A  Click
11 complement(27279..27659)  PHAGE_Strept_MM1: hypothetical protein MM1p03; SPJ_0033; phage(gi15088746)  1e-26  Click
12 complement(27672..27935)  PHAGE_Mycoba_Fruitloop: gp41; SPJ_0034; phage(gi206599921)  3e-07  Click
13 complement(27935..28168)  hypothetical protein; SPJ_0035  N/A  Click
14 complement(28168..28536)  PHAGE_Strept_MM1: repressor protein; SPJ_0036; phage(gi15088747)  2e-28  Click
15 28834..28965  hypothetical protein; SPJ_0037  N/A  Click
16 29108..29299  PHAGE_Strept_MM1: hypothetical protein MM1p05; SPJ_0038; phage(gi15088748)  7e-26  Click
17 29322..29525  hypothetical protein; SPJ_0039  N/A  Click
18 29540..29683  PHAGE_Strept_1: hypothetical protein EJ-1p14; SPJ_0041; phage(gi39653688)  3e-22  Click
19 complement(29680..29847)  PHAGE_Entero_P22: hypothetical protein P22gp16; SPJ_0040; phage(gi9635553)  2e-06  Click
20 29918..30232  PHAGE_Strept_MM1: N-acetylmuramoyl-L-alanine amidase; SPJ_0042; phage(gi15088793)  5e-59  Click
21 30322..30471  hypothetical protein; SPJ_0044  N/A  Click
22 complement(30452..30631)  PHAGE_Strept_PH10: hypothetical protein PH10_gp52; SPJ_0043; phage(gi238821369)  4e-25  Click
23 31227..31670  PHAGE_Clostr_st: putative dUTPase; SPJ_0045; phage(gi80159764)  3e-31  Click
24 31630..32187  phosphoglycerate mutase family protein; SPJ_0046  N/A  Click
25 32300..33562  PHAGE_Bacill_W.Ph.: gp46; SPJ_0047; phage(gi371671106)  1e-06  Click
26 33635..34132  carbonate dehydratase; SPJ_0048  N/A  Click
27 34157..34816  hypothetical protein; SPJ_0049  N/A  Click
28 34809..34940  hypothetical protein; SPJ_0050  N/A  Click
29 35085..36053  PHAGE_Salmon_7_11: putative ribose-phosphate pyrophosphokinase; SPJ_0051; phage(gi345461227)  1e-19  Click
30 complement(36175..36468)  PROPHAGE_Staphy_N315: transposase; SPJ_0052; phage(gi15927655)  6e-06  Click
31 40938..40949  attR    TTTTGTGTTATA  N/A  Click
Region 2, total : 71 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1737927..1739282)  PHAGE_Acanth_mimivirus: putative RNA methyltransferase; SPJ_1834; phage(gi311977789)  1e-22  Click
2 1739320..1740096  recombination regulator RecX; SPJ_1835  N/A  Click
3 1740144..1740156  attL    AGTAAATGATAAA  N/A  Click
4 1740185..1740718  hypothetical protein; SPJ_1836  N/A  Click
5 complement(1741076..1741282)  hypothetical protein; SPJ_1837  N/A  Click
6 1741442..1742224  PROPHAGE_Staphy_N315: transposase; SPJ_1838; phage(gi15927655)  5e-27  Click
7 1742221..1742748  PROPHAGE_Staphy_N315: transposase; SPJ_1839; phage(gi15927655)  7e-15  Click
8 complement(1742847..1744469)  PHAGE_Halocy_JM_2012: chaperonin GroEL; SPJ_1840; phage(gi389060206)  1e-66  Click
9 complement(1744485..1744769)  PHAGE_Bacill_36: GroES; SPJ_1841; phage(gi156564025)  3e-07  Click
10 complement(1744925..1745302)  PHAGE_Strept_SMP: single-strand binding protein; SPJ_1842; phage(gi119953767)  3e-27  Click
11 complement(1745329..1745571)  PHAGE_Strept_PH15: hypothetical protein phiPH15_gp60; SPJ_1843; phage(gi190151475)  7e-22  Click
12 complement(1745803..1746759)  PHAGE_Strept_MM1: N-acetylmuramoyl-L-alanine amidase; SPJ_1844; phage(gi15088793)  0.0  Click
13 complement(1746765..1747094)  PHAGE_Strept_MM1: putative holin 2; SPJ_1845; phage(gi15088792)  9e-43  Click
14 complement(1747098..1747397)  PHAGE_Bacill_Finn: hypothetical protein; SPJ_1846; phage(gi460042205)  1e-05  Click
15 complement(1747407..1747757)  PHAGE_Strept_SMP: hypothetical protein; SPJ_1847; phage(gi119953750)  2e-43  Click
16 complement(1747760..1747963)  PHAGE_Strept_SMP: hypothetical protein; SPJ_1848; phage(gi119953749)  6e-07  Click
17 complement(1747944..1748060)  PHAGE_Strept_PH10: hypothetical protein PH10_gp46; SPJ_1849; phage(gi238821363)  1e-09  Click
18 complement(1748057..1754383)  PHAGE_Strept_PH10: hypothetical protein PH10_gp46; SPJ_1850; phage(gi238821363)  2e-96  Click
19 complement(1754388..1754738)  PHAGE_Brocho_BL3: gp18; SPJ_1851; phage(gi327409410)  2e-29  Click
20 complement(1754747..1758400)  PHAGE_Lactoc_712: tail tape measure; SPJ_1852; phage(gi115315588)  8e-36  Click
21 complement(1758387..1758737)  hypothetical protein; SPJ_1853  N/A  Click
22 complement(1758776..1759156)  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0320; SPJ_1854; phage(gi41179250)  7e-10  Click
23 complement(1759161..1759574)  PHAGE_Lactob_Lj965: putative major tail protein; SPJ_1855; phage(gi41179249)  5e-10  Click
24 complement(1759577..1759945)  PHAGE_Bacill_phIS3501: phage protein; SPJ_1856; phage(gi422934335)  2e-09  Click
25 complement(1759942..1760268)  PHAGE_Brocho_BL3: gp12; SPJ_1857; phage(gi327409402)  5e-14  Click
26 complement(1760432..1760734)  hypothetical protein; SPJ_1858  N/A  Click
27 complement(1760751..1761062)  PHAGE_Brocho_BL3: gp10; SPJ_1859; phage(gi327409400)  6e-05  Click
28 complement(1761064..1761252)  hypothetical protein; SPJ_1860  N/A  Click
29 complement(1761242..1761424)  transcription termination factor; SPJ_1861  N/A  Click
30 complement(1761436..1762281)  PHAGE_Strept_5093: major head protein; SPJ_1862; phage(gi238801899)  1e-106  Click
31 complement(1762287..1762871)  PHAGE_Strept_6: hypothetical protein SpyM3_1430; SPJ_1863; phage(gi28876460)  6e-28  Click
32 complement(1763088..1763339)  PHAGE_Strept_SMP: hypothetical protein; SPJ_1864; phage(gi119953783)  5e-38  Click
33 complement(1763341..1763586)  PHAGE_Bacill_SPP1: hypothetical protein SPP1p009; SPJ_1865; phage(gi22855054)  9e-19  Click
34 complement(1763629..1764042)  PHAGE_Salmon_PVP_SE1: hypothetical protein; SPJ_1866; phage(gi363539742)  1e-26  Click
35 complement(1764039..1764248)  hypothetical protein; SPJ_1867  N/A  Click
36 complement(1764250..1765833)  PHAGE_Clostr_phiC2: putative head morphogenesis protein; SPJ_1868; phage(gi134287339)  4e-43  Click
37 complement(1765796..1767097)  PHAGE_Entero_phiFL3A: portal protein; SPJ_1869; phage(gi281416257)  3e-59  Click
38 complement(1767277..1768575)  PHAGE_Strept_SMP: terminase large subunit; SPJ_1870; phage(gi119953777)  4e-151  Click
39 complement(1768553..1769053)  PHAGE_Strept_P9: terminase small subunit; SPJ_1871; phage(gi157311160)  3e-47  Click
40 complement(1769298..1769381)  tRNA  N/A  Click
41 complement(1769461..1769865)  PHAGE_Strept_3: hypothetical protein SpyM3_1124; SPJ_1873; phage(gi28876294)  3e-24  Click
42 complement(1770306..1770743)  PHAGE_Strept_MM1: hypothetical protein MM1p26; SPJ_1874; phage(gi15088767)  2e-40  Click
43 complement(1770755..1771177)  PHAGE_Strept_TP_J34: hypothetical protein; SPJ_1875; phage(gi444475899)  1e-51  Click
44 complement(1771431..1771592)  hypothetical protein; SPJ_1876  N/A  Click
45 complement(1771592..1772284)  PHAGE_Strept_O1205: hypothetical protein O1205p19; SPJ_1877; phage(gi23455867)  2e-21  Click
46 complement(1772286..1772603)  PHAGE_Strept_MM1: hypothetical protein MM1p22; SPJ_1878; phage(gi15088763)  7e-58  Click
47 complement(1772826..1773257)  PHAGE_Strept_M102: hypothetical protein M102_gp36; SPJ_1879; phage(gi242345607)  7e-34  Click
48 complement(1773254..1773652)  PHAGE_Strept_SMP: hypothetical protein; SPJ_1880; phage(gi119953763)  2e-08  Click
49 complement(1773665..1774081)  PHAGE_Strept_SMP: single-strand binding protein; SPJ_1881; phage(gi119953767)  3e-33  Click
50 complement(1774078..1774194)  hypothetical protein; SPJ_1882  N/A  Click
51 complement(1774504..1774992)  hypothetical protein; SPJ_1883  N/A  Click
52 complement(1774995..1776059)  PHAGE_Strept_M102: hypothetical protein M102_gp28; SPJ_1884; phage(gi242345599)  4e-58  Click
53 complement(1776069..1776887)  PHAGE_Strept_M102: hypothetical protein M102_gp27; SPJ_1885; phage(gi242345598)  1e-44  Click
54 complement(1776924..1777040)  PHAGE_Strept_1: hypothetical protein EJ-1p19; SPJ_1886; phage(gi39653693)  2e-09  Click
55 complement(1777157..1777417)  hypothetical protein; SPJ_1887  N/A  Click
56 complement(1777430..1777684)  hypothetical protein; SPJ_1888  N/A  Click
57 complement(1777685..1777906)  hypothetical protein; SPJ_1889  N/A  Click
58 complement(1777906..1778043)  hypothetical protein; SPJ_1890  N/A  Click
59 complement(1778061..1778858)  hypothetical protein; SPJ_1891  N/A  Click
60 complement(1778925..1779068)  hypothetical protein; SPJ_1892  N/A  Click
61 1779185..1779409  hypothetical protein; SPJ_1894  N/A  Click
62 complement(1779406..1779588)  hypothetical protein; SPJ_1893  N/A  Click
63 complement(1779773..1780051)  PHAGE_Strept_MM1: hypothetical protein MM1p06; SPJ_1895; phage(gi15088749)  9e-32  Click
64 complement(1780218..1780454)  phage protein; SPJ_1896  N/A  Click
65 1780528..1780734  hypothetical protein; SPJ_1897  N/A  Click
66 1781135..1781584  phage protein; SPJ_1899  N/A  Click
67 complement(1781575..1781706)  hypothetical protein; SPJ_1898  N/A  Click
68 complement(1781817..1782092)  PHAGE_Strept_1: hypothetical protein EJ-1p05; SPJ_1900; phage(gi39653679)  5e-46  Click
69 1782253..1783005  PHAGE_Strept_SMP: putative repressor; SPJ_1901; phage(gi119953755)  4e-39  Click
70 1783087..1783099  attR    AGTAAATGATAAA  N/A  Click
71 complement(1783143..1783313)  hypothetical protein; SPJ_1902  N/A  Click
72 1783389..1784816  PHAGE_Lister_A118: putative integrase; SPJ_1903; phage(gi16798814)  2e-65  Click
73 complement(1784952..1785713)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; SPJ_1904; phage(gi116326757)  6e-06  Click
74 complement(1785755..1786381)  putative tRNA binding domain protein; SPJ_1905  N/A  Click
75 complement(1786397..1786714)  PHAGE_Acanth_mimivirus: thioredoxin-like protein; SPJ_1906; phage(gi311977943)  7e-05  Click