Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 577843..580743  PHAGE_Cowpox_virus: CPXV220 protein; WRi_005390; phage(gi20178579)  6e-12  Click
2 580942..580953  attL    TGCTTTTTTTGA  N/A  Click
3 complement(581150..582643)  PHAGE_Geobac_E2: putative recombinase; WRi_005400; phage(gi148747753)  5e-41  Click
4 complement(582831..583663)  PROPHAGE_Xantho_33913: IS1480 transposase; WRi_005420; phage(gi21231089)  3e-22  Click
5 complement(584009..584467)  PHAGE_Fowlpo_virus: Ankyrin repeat gene family protein; WRi_005440; phage(gi9634688)  3e-12  Click
6 complement(584493..585227)  PHAGE_Fowlpo_virus: Ankyrin repeat gene family protein; WRi_005450; phage(gi9634832)  2e-16  Click
7 complement(585395..586555)  hypothetical protein; WRi_005460  N/A  Click
8 complement(586555..587346)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; WRi_005470; phage(gi109289956)  7e-32  Click
9 complement(587349..587684)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; WRi_005480; phage(gi428782737)  1e-27  Click
10 complement(587687..587941)  PHAGE_Yersin_phiR1_37: hypothetical protein; WRi_005490; phage(gi358356625)  3e-07  Click
11 complement(587949..588413)  PHAGE_Burkho_2: gp39, phage baseplate assembly protein; WRi_005500; phage(gi134288696)  3e-23  Click
12 complement(588400..588876)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_005510; phage(gi428782734)  2e-09  Click
13 complement(588873..589394)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_005520; phage(gi428782733)  7e-22  Click
14 complement(589396..589701)  hypothetical protein; WRi_005530  N/A  Click
15 complement(589799..590803)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_005540; phage(gi428782731)  5e-87  Click
16 complement(590841..591212)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_005550; phage(gi428782730)  2e-05  Click
17 complement(591287..592348)  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; WRi_005560; phage(gi17975166)  4e-51  Click
18 complement(592345..593763)  PHAGE_Vibrio_vB_VpaM_MAR: portal protein; WRi_005570; phage(gi428782728)  2e-102  Click
19 complement(593866..594147)  PHAGE_Mycoba_Fruitloop: gp41; WRi_005580; phage(gi206599921)  3e-07  Click
20 complement(594138..594398)  hypothetical protein; WRi_005590  N/A  Click
21 complement(594439..594672)  hypothetical protein; WRi_005600  N/A  Click
22 complement(594676..596499)  PHAGE_Vibrio_vB_VpaM_MAR: terminase large subunit; WRi_005610; phage(gi428782726)  2e-71  Click
23 complement(596496..597977)  PHAGE_Parame_AR158: hypothetical protein AR158_C015L; WRi_005620; phage(gi157953206)  2e-22  Click
24 complement(597981..598460)  hypothetical protein; WRi_005630  N/A  Click
25 complement(598474..599700)  PHAGE_Strept_1: transferase; WRi_005640; phage(gi39653711)  6e-75  Click
26 complement(599814..600269)  PHAGE_Tetras_SI1: hypothetical protein; WRi_005650; phage(gi472342269)  5e-06  Click
27 604148..604159  attR    TGCTTTTTTTGA  N/A  Click
Region 2, total : 35 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 736054..736065  attL    TTTAGTAATAGA  N/A  Click
2 complement(750749..753349)  PHAGE_Canary_virus: CNPV223 ankyrin repeat protein; WRi_006870; phage(gi40556161)  3e-54  Click
3 complement(754223..755143)  patatin family protein; WRi_006880  N/A  Click
4 complement(755153..755371)  hypothetical protein; WRi_006890  N/A  Click
5 755496..756032  PHAGE_Canary_virus: CNPV294 ankyrin repeat protein; WRi_006900; phage(gi40556232)  1e-13  Click
6 complement(755998..756978)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; WRi_006910; phage(gi428782753)  2e-69  Click
7 complement(756980..757186)  PHAGE_Salmon_RE_2010: tail component protein; WRi_006920; phage(gi418489702)  1e-11  Click
8 complement(757164..757580)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; WRi_006930; phage(gi428782751)  2e-16  Click
9 complement(757584..759764)  PHAGE_Vibrio_VP882: phage-related tail protein; WRi_006940; phage(gi126010872)  4e-70  Click
10 complement(759761..759880)  hypothetical protein; WRi_006950  N/A  Click
11 complement(759877..760128)  PHAGE_Burkho_BcepMu: gp41; WRi_006960; phage(gi48696951)  2e-05  Click
12 complement(760145..760645)  PHAGE_Vibrio_vB_VpaM_MAR: tail tube protein; WRi_006970; phage(gi428782747)  2e-43  Click
13 complement(760667..761818)  PHAGE_Vibrio_vB_VpaM_MAR: tail sheath protein; WRi_006980; phage(gi428782746)  2e-117  Click
14 complement(761811..762371)  hypothetical protein; WRi_006990  N/A  Click
15 complement(762386..763852)  PHAGE_Yoka_poxvirus: truncated A-type inclusion protein; WRi_007000; phage(gi345107317)  8e-05  Click
16 complement(763849..764043)  hypothetical protein; WRi_007010  N/A  Click
17 complement(764049..765236)  PHAGE_Staphy_vB_SauM_Romulus: tail protein; WRi_007020; phage(gi472437810)  2e-31  Click
18 complement(766390..767222)  PROPHAGE_Xantho_33913: IS1480 transposase; WRi_007040; phage(gi21231089)  3e-22  Click
19 complement(768102..768788)  PHAGE_Bacill_SPO1: gp16.1; WRi_007060; phage(gi209972921)  9e-06  Click
20 complement(768809..770026)  hypothetical protein; WRi_007070  N/A  Click
21 complement(770033..770830)  PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; WRi_007080; phage(gi29143752)  1e-42  Click
22 complement(770840..771175)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; WRi_007090; phage(gi428782737)  1e-30  Click
23 complement(771181..771435)  PHAGE_Campyl_NCTC12673: Probable gp5.4 conserved hypothetical protein; WRi_007100; phage(gi332672343)  5e-09  Click
24 complement(771444..771899)  PHAGE_Salmon_RE_2010: baseplate assembly protein V; WRi_007110; phage(gi418489709)  4e-20  Click
25 complement(771886..772359)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_007120; phage(gi428782734)  3e-07  Click
26 complement(772340..772837)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_007130; phage(gi428782733)  2e-11  Click
27 complement(772830..773150)  hypothetical protein; WRi_007140  N/A  Click
28 complement(773234..774238)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_007150; phage(gi428782731)  4e-86  Click
29 complement(774264..774635)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_007160; phage(gi428782730)  3e-06  Click
30 complement(774703..775740)  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; WRi_007170; phage(gi17975166)  4e-50  Click
31 complement(775737..777158)  PHAGE_Vibrio_vB_VpaM_MAR: portal protein; WRi_007180; phage(gi428782728)  5e-100  Click
32 complement(777158..778216)  phage uncharacterized protein; WRi_007190  N/A  Click
33 complement(778216..778452)  hypothetical protein; WRi_007200  N/A  Click
34 complement(778442..780283)  PHAGE_Vibrio_vB_VpaM_MAR: terminase large subunit; WRi_007210; phage(gi428782726)  3e-72  Click
35 782943..784439  PHAGE_Fowlpo_virus: Ankyrin repeat gene family protein; WRi_007240; phage(gi9634694)  1e-07  Click
36 784286..784297  attR    TTTAGTAATAGA  N/A  Click
37 complement(784436..785356)  PHAGE_Achole_L2: integrase; WRi_007250; phage(gi9626516)  3e-12  Click
Region 3, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1084302..1087202  PHAGE_Cowpox_virus: CPXV220 protein; WRi_010050; phage(gi20178579)  6e-12  Click
2 1087401..1087412  attL    TGCTTTTTTTGA  N/A  Click
3 complement(1087609..1089102)  PHAGE_Geobac_E2: putative recombinase; WRi_010060; phage(gi148747753)  5e-41  Click
4 complement(1089290..1090122)  PROPHAGE_Xantho_33913: IS1480 transposase; WRi_010080; phage(gi21231089)  3e-22  Click
5 complement(1090468..1090926)  PHAGE_Fowlpo_virus: Ankyrin repeat gene family protein; WRi_010100; phage(gi9634688)  3e-12  Click
6 complement(1090952..1091686)  PHAGE_Fowlpo_virus: Ankyrin repeat gene family protein; WRi_010110; phage(gi9634832)  2e-16  Click
7 complement(1091854..1093014)  hypothetical protein; WRi_010120  N/A  Click
8 complement(1093014..1093805)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; WRi_010130; phage(gi109289956)  7e-32  Click
9 complement(1093808..1094143)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; WRi_010140; phage(gi428782737)  1e-27  Click
10 complement(1094146..1094400)  PHAGE_Yersin_phiR1_37: hypothetical protein; WRi_010150; phage(gi358356625)  3e-07  Click
11 complement(1094408..1094872)  PHAGE_Burkho_2: gp39, phage baseplate assembly protein; WRi_010160; phage(gi134288696)  3e-23  Click
12 complement(1094859..1095335)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_010170; phage(gi428782734)  2e-09  Click
13 complement(1095332..1095853)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_010180; phage(gi428782733)  7e-22  Click
14 complement(1095855..1096160)  hypothetical protein; WRi_010190  N/A  Click
15 complement(1096258..1097262)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_010200; phage(gi428782731)  5e-87  Click
16 complement(1097300..1097671)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; WRi_010210; phage(gi428782730)  2e-05  Click
17 complement(1097746..1098807)  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; WRi_010220; phage(gi17975166)  4e-51  Click
18 complement(1098804..1100222)  PHAGE_Vibrio_vB_VpaM_MAR: portal protein; WRi_010230; phage(gi428782728)  2e-102  Click
19 complement(1100325..1100606)  PHAGE_Mycoba_Fruitloop: gp41; WRi_010240; phage(gi206599921)  3e-07  Click
20 complement(1100597..1100857)  hypothetical protein; WRi_010250  N/A  Click
21 complement(1100898..1101131)  hypothetical protein; WRi_010260  N/A  Click
22 complement(1101135..1102958)  PHAGE_Vibrio_vB_VpaM_MAR: terminase large subunit; WRi_010270; phage(gi428782726)  2e-71  Click
23 complement(1102955..1104436)  PHAGE_Parame_AR158: hypothetical protein AR158_C015L; WRi_010280; phage(gi157953206)  2e-22  Click
24 complement(1104440..1104919)  hypothetical protein; WRi_010290  N/A  Click
25 complement(1104933..1106159)  PHAGE_Strept_1: transferase; WRi_010300; phage(gi39653711)  6e-75  Click
26 complement(1106273..1106728)  PHAGE_Tetras_SI1: hypothetical protein; WRi_010310; phage(gi472342269)  5e-06  Click
27 1110607..1110618  attR    TGCTTTTTTTGA  N/A  Click
Region 4, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1337269..1337280  attL    GTTTAAAACACA  N/A  Click
2 complement(1337329..1339050)  PHAGE_Lister_A118: putative integrase; WRi_012450; phage(gi16798814)  2e-25  Click
3 complement(1339455..1340267)  PHAGE_Canary_virus: CNPV223 ankyrin repeat protein; WRi_012460; phage(gi40556161)  5e-27  Click
4 complement(1340435..1341595)  hypothetical protein; WRi_012470  N/A  Click
5 complement(1341595..1342404)  PHAGE_Yersin_413C: gpJ; WRi_012480; phage(gi30065720)  3e-34  Click
6 complement(1342407..1342742)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; WRi_012490; phage(gi428782737)  4e-30  Click
7 complement(1344060..1344892)  PROPHAGE_Xantho_33913: IS1480 transposase; WRi_012520; phage(gi21231089)  3e-22  Click
8 complement(1345028..1345492)  PHAGE_Yersin_413C: gpV; WRi_012540; phage(gi30065718)  3e-21  Click
9 1351692..1351703  attR    GTTTAAAACACA  N/A  Click