Definition Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 chromosome, complete genome.
Accession NC_012125
Length 4,833,080
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 37 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 917495..917512  attL    AGGCAACAAAAAACCCAC  N/A  Click
2 complement(917587..918513)  PHAGE_Erwini_ENT90: phage integrase family protein; SPC_0869; phage(gi431810942)  8e-86  Click
3 complement(918531..918653)  hypothetical protein; SPC_0870  N/A  Click
4 complement(918744..920525)  PHAGE_Entero_2: hypothetical protein STM2723.1.Fels2; SPC_0871; phage(gi169936050)  1e-67  Click
5 complement(920537..920893)  PHAGE_Entero_PsP3: CI; SPC_0872; phage(gi41057393)  1e-09  Click
6 921486..921989  PHAGE_Salmon_RE_2010: regulatory protein; SPC_0873; phage(gi418489686)  6e-39  Click
7 921999..922226  hypothetical protein; SPC_0874  N/A  Click
8 complement(922350..922583)  hypothetical protein; SPC_0875  N/A  Click
9 922689..923042  hypothetical protein; SPC_0876  N/A  Click
10 923110..923340  hypothetical protein; SPC_0877  N/A  Click
11 923358..924191  PHAGE_Entero_2: DNA adenine methylase-like protein; SPC_0878; phage(gi169936055)  7e-67  Click
12 924188..926209  PHAGE_Erwini_ENT90: replication protein A; SPC_0879; phage(gi431810936)  1e-127  Click
13 926343..926540  PHAGE_Salmon_RE_2010: hypothetical protein; SPC_0880; phage(gi418489693)  3e-06  Click
14 complement(926514..926783)  PHAGE_Vibrio_kappa: hypothetical zinc-finger protein; SPC_0881; phage(gi165970253)  2e-20  Click
15 complement(926834..927895)  PHAGE_Haemop_HP2: orf15; SPC_0882; phage(gi17981829)  1e-81  Click
16 complement(927892..929667)  PHAGE_Haemop_HP2: terminase; SPC_0883; phage(gi17981830)  1e-179  Click
17 complement(929675..929788)  hypothetical protein; SPC_0884  N/A  Click
18 929828..930631  PHAGE_Haemop_HP2: scaffold; SPC_0885; phage(gi17981831)  4e-36  Click
19 930693..931715  PHAGE_Aeromo_phiO18P: putative major capsid protein; SPC_0886; phage(gi148727153)  6e-93  Click
20 931719..932420  PHAGE_Aeromo_phiO18P: putative terminase small subunit; SPC_0887; phage(gi148727154)  1e-54  Click
21 932481..932969  PHAGE_Haemop_HP2: packaging protein; SPC_0888; phage(gi17981834)  4e-25  Click
22 932966..933472  PHAGE_Haemop_HP2: orf21; SPC_0889; phage(gi17981835)  1e-11  Click
23 934173..935300  PHAGE_Haemop_HP2: tail sheath; SPC_0891; phage(gi17981837)  6e-107  Click
24 935297..935752  PHAGE_Haemop_HP2: tail tube; SPC_0892; phage(gi17981838)  4e-42  Click
25 935762..936055  PHAGE_Burkho_KS9: holin gp22; SPC_0893; phage(gi255033753)  1e-17  Click
26 936052..936393  PHAGE_Pseudo_PaP2: hypothetical protein PaP2_gp17; SPC_0894; phage(gi48697087)  7e-26  Click
27 936393..936725  PHAGE_Erwini_phiEa104: hypothetical protein; SPC_0895; phage(gi327198401)  7e-10  Click
28 936872..937129  PHAGE_Haemop_HP2: orf26; SPC_0896; phage(gi17981842)  4e-15  Click
29 937317..939287  PHAGE_Haemop_HP2: orf27; SPC_0897; phage(gi17981843)  3e-78  Click
30 939284..939613  PHAGE_Haemop_HP2: orf28; SPC_0898; phage(gi17981844)  1e-27  Click
31 939610..940794  PHAGE_Haemop_HP2: orf29; SPC_0899; phage(gi17981845)  7e-115  Click
32 940787..941374  PHAGE_Haemop_HP2: orf30; SPC_0900; phage(gi17981846)  2e-46  Click
33 941384..943399  PHAGE_Haemop_HP2: tail fibers; SPC_0901; phage(gi17981847)  7e-70  Click
34 943362..943541  PHAGE_Entero_Mu: tail fiber; SPC_0902; phage(gi9633540)  8e-14  Click
35 943554..944108  PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; SPC_0903; phage(gi23505469)  5e-51  Click
36 944098..944823  PHAGE_Haemop_HP2: orf33; SPC_0904; phage(gi17981849)  8e-13  Click
37 944795..945340  PHAGE_Haemop_HP2: orf34; SPC_0905; phage(gi17981850)  1e-28  Click
38 945340..947043  PHAGE_Haemop_HP2: orf35; SPC_0906; phage(gi17981851)  3e-125  Click
39 948217..948234  attR    AGGCAACAAAAAACCCAC  N/A  Click
Region 2, total : 60 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1061094..1061105  attL    GTCGCCACGGCA  N/A  Click
2 complement(1061420..1062712)  PHAGE_Gifsy_2: bacteriophage integrase; SPC_1007; phage(gi169257268)  0.0  Click
3 complement(1062757..1063005)  PHAGE_Gifsy_2: bacteriophage excisionase; SPC_1008; phage(gi169257269)  1e-43  Click
4 complement(1063046..1063252)  PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SPC_1009; phage(gi169257270)  2e-33  Click
5 complement(1063328..1064437)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_1010; phage(gi169257271)  0.0  Click
6 complement(1064448..1067375)  PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SPC_1011; phage(gi169257272)  0.0  Click
7 complement(1067502..1067852)  PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SPC_1012; phage(gi169257273)  1e-35  Click
8 1068443..1068649  PHAGE_Entero_HK225: hypothetical protein; SPC_1013; phage(gi428782417)  3e-19  Click
9 complement(1068682..1069614)  PHAGE_Entero_mEpX1: hypothetical protein; SPC_1014; phage(gi428781913)  4e-91  Click
10 complement(1069611..1069946)  PHAGE_Entero_mEpX1: hypothetical protein; SPC_1015; phage(gi428781914)  4e-37  Click
11 complement(1070235..1070618)  PHAGE_Entero_mEp237: prophage repressor; SPC_1016; phage(gi435439304)  5e-60  Click
12 1071134..1071283  PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SPC_1017; phage(gi169257278)  2e-21  Click
13 1071375..1072202  PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SPC_1018; phage(gi169257279)  1e-39  Click
14 1072289..1072894  PHAGE_Escher_HK639: replication protein 14; SPC_1019; phage(gi356870655)  1e-56  Click
15 1072908..1073705  PHAGE_Entero_P22: EaA; SPC_1020; phage(gi9635497)  5e-30  Click
16 1073804..1074070  PHAGE_Salmon_SPN3UB: hypothetical protein; SPC_1021; phage(gi423262434)  1e-46  Click
17 1074226..1074459  PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SPC_1022; phage(gi169257284)  2e-38  Click
18 1074708..1074824  PHAGE_Entero_mEp237: hypothetical protein; SPC_1023; phage(gi435439314)  2e-15  Click
19 1074859..1075461  PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SPC_1024; phage(gi169257286)  6e-109  Click
20 1075461..1075667  PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; SPC_1025; phage(gi169257287)  1e-35  Click
21 1075670..1076281  PHAGE_Gifsy_2: NinG; SPC_1026; phage(gi169257288)  1e-113  Click
22 1076414..1077211  PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; SPC_1027; phage(gi169257290)  1e-153  Click
23 complement(1077757..1078206)  PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; SPC_1028; phage(gi169257293)  2e-83  Click
24 complement(1078567..1079253)  PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SPC_1029; phage(gi169257294)  2e-133  Click
25 1079610..1079858  PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SPC_1030; phage(gi169257295)  5e-41  Click
26 1079830..1080294  PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SPC_1031; phage(gi169257296)  3e-83  Click
27 1080291..1080761  PHAGE_Salmon_SPN3UB: endopeptidase Rz; SPC_1032; phage(gi423262445)  2e-63  Click
28 1080979..1081503  PHAGE_Escher_HK639: rha protein; SPC_1033; phage(gi356870673)  1e-92  Click
29 1081566..1082186  PHAGE_Escher_HK639: terminase small subunit; SPC_1034; phage(gi356870601)  4e-88  Click
30 1082197..1083819  PHAGE_Burkho_BcepB1A: gp33 TerL; SPC_1035; phage(gi48697520)  2e-155  Click
31 1083852..1085288  PHAGE_Vibrio_CP_T1: putative portal protein; SPC_1036; phage(gi418489212)  3e-42  Click
32 1085302..1085910  PHAGE_Xantho_vB_XveM_DIBBI: head morphogenesis protein; SPC_1037; phage(gi389060406)  9e-15  Click
33 1085925..1087157  PHAGE_Edward_MSW_3: putative head protein; SPC_1038; phage(gi448261038)  6e-19  Click
34 1087183..1087659  bacteriophage protein; SPC_1039  N/A  Click
35 1087671..1088612  PHAGE_Vibrio_CP_T1: putative major capsid protein; SPC_1040; phage(gi418489228)  3e-19  Click
36 1088654..1089022  bacteriophage protein; SPC_1041  N/A  Click
37 1088988..1089395  PHAGE_Pseudo_KPP12: putative structural protein; SPC_1042; phage(gi431811107)  7e-08  Click
38 1089392..1089946  PHAGE_Psychr_pOW20_A: hypothetical protein; SPC_1043; phage(gi472339833)  3e-10  Click
39 1090017..1090322  bacteriophage protein; SPC_1044  N/A  Click
40 1090297..1090860  bacteriophage protein; SPC_1045  N/A  Click
41 1090864..1092009  PHAGE_Aggreg_S1249: hypothetical protein; SPC_1046; phage(gi273809558)  7e-40  Click
42 1092022..1092465  PHAGE_Entero_WV8: hypothetical protein WV8_gp071; SPC_1047; phage(gi238801803)  4e-06  Click
43 1092469..1092921  bacteriophage protein; SPC_1048  N/A  Click
44 1093099..1094733  PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber/lysozyme protein; SPC_1049; phage(gi422937553)  2e-13  Click
45 1094733..1095383  PHAGE_Aggreg_S1249: hypothetical protein; SPC_1050; phage(gi273809554)  3e-07  Click
46 1095387..1095689  PHAGE_Psychr_pOW20_A: hypothetical protein; SPC_1051; phage(gi472339842)  3e-05  Click
47 1095692..1096723  PHAGE_Psychr_pOW20_A: hypothetical protein; SPC_1052; phage(gi472339843)  3e-22  Click
48 1096720..1097055  hypothetical protein; SPC_1053  N/A  Click
49 complement(1097062..1097268)  regulatory protein; SPC_1054  N/A  Click
50 1097540..1097698  hypothetical protein; SPC_1055  N/A  Click
51 1097688..1098335  PHAGE_Salmon_SPN3UB: hypothetical protein; SPC_1056; phage(gi423262398)  8e-35  Click
52 1098400..1099185  PHAGE_Vibrio_ICP1: putative antirepressor protein; SPC_1057; phage(gi325171055)  5e-17  Click
53 1099249..1100004  PHAGE_Aggreg_S1249: putative baseplate protein; SPC_1058; phage(gi273809550)  8e-33  Click
54 1100140..1100493  PHAGE_Vibrio_CP_T1: hypothetical protein; SPC_1059; phage(gi418489248)  7e-13  Click
55 1100506..1101693  PHAGE_Iodoba_phiPLPE: gp61 putative baseplate protein; SPC_1060; phage(gi197085675)  1e-40  Click
56 1101690..1102370  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p49; SPC_1061; phage(gi31544052)  2e-12  Click
57 1102352..1103782  PHAGE_Entero_2: P2 gpH-like protein; SPC_1062; phage(gi169936027)  0.0  Click
58 1103789..1104205  PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; SPC_1063; phage(gi23505469)  8e-24  Click
59 complement(1104619..1104771)  hypothetical protein; SPC_1064  N/A  Click
60 complement(1105022..1106488)  PHAGE_Gifsy_1: leucine-rich repeat protein; SPC_1065; phage(gi169257209)  0.0  Click
61 1106917..1108716  PHAGE_Cafete_BV_PW1: putative eIF-2gamma; SPC_1066; phage(gi310831469)  1e-04  Click
62 1109848..1109859  attR    GTCGCCACGGCA  N/A  Click
Region 3, total : 46 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1327042..1327053  attL    TAATCGTTTATT  N/A  Click
2 complement(1337107..1337901)  PHAGE_Salmon_epsilon34: EaD-like protein; SPC_1266; phage(gi221328645)  2e-56  Click
3 complement(1337898..1338299)  hypothetical protein; SPC_1267  N/A  Click
4 complement(1338296..1338529)  hypothetical protein; SPC_1268  N/A  Click
5 complement(1338675..1339076)  PHAGE_Entero_ES18: gp43; SPC_1269; phage(gi62362256)  4e-21  Click
6 1339643..1339759  hypothetical protein; SPC_1270  N/A  Click
7 complement(1339951..1340076)  PHAGE_Salmon_SPN9CC: anti-RecBCD protein 2; SPC_1271; phage(gi389060498)  5e-17  Click
8 complement(1340262..1340810)  PHAGE_Salmon_epsilon34: putative exodeoxyribonuclease VIII; SPC_1272; phage(gi221328652)  2e-100  Click
9 complement(1341073..1341300)  PHAGE_Salmon_epsilon34: SSB; Single-strand binding protein; SPC_1273; phage(gi221328653)  4e-32  Click
10 complement(1341325..1342032)  PHAGE_Entero_IME10: ORF252; SPC_1274; phage(gi422934293)  2e-132  Click
11 complement(1342162..1342383)  PHAGE_Salmon_vB_SosS_Oslo: Kil protein; SPC_1275; phage(gi399528802)  8e-33  Click
12 complement(1342331..1342504)  PHAGE_Salmon_vB_SemP_Emek: C3 protein; SPC_1276; phage(gi399498834)  2e-24  Click
13 complement(1342574..1342801)  PHAGE_Salmon_ST160: Gp17; SPC_1277; phage(gi318065919)  7e-42  Click
14 complement(1343040..1343240)  PHAGE_Entero_c_1: hypothetical protein; SPC_1278; phage(gi428781779)  1e-06  Click
15 complement(1344027..1344365)  PHAGE_Salmon_ST160: Gp24; SPC_1279; phage(gi318065922)  2e-56  Click
16 complement(1344392..1344473)  tRNA  N/A  Click
17 1344899..1345015  hypothetical protein; SPC_1280  N/A  Click
18 1345464..1345679  PHAGE_Entero_HK633: prophage antirepressor; SPC_1281; phage(gi428782568)  2e-22  Click
19 1345881..1346078  PHAGE_Salmon_vB_SosS_Oslo: CII protein; SPC_1282; phage(gi399528815)  7e-30  Click
20 1346100..1346243  hypothetical protein; SPC_1283  N/A  Click
21 1347049..1348929  PHAGE_Salmon_epsilon34: DNA replication protein; SPC_1284; phage(gi221328670)  0.0  Click
22 1349080..1349208  PHAGE_Salmon_epsilon34: hypothetical protein epsilon34_gp53; SPC_1285; phage(gi221328671)  5e-20  Click
23 complement(1349226..1349366)  hypothetical protein; SPC_1286  N/A  Click
24 1350523..1350651  PHAGE_Salmon_vB_SemP_Emek: NinF; SPC_1287; phage(gi399498849)  1e-16  Click
25 1350907..1351302  PHAGE_Entero_ST64T: Rus; SPC_1288; phage(gi24371573)  6e-71  Click
26 1351329..1351502  PHAGE_Salmon_vB_SosS_Oslo: NinH protein; SPC_1289; phage(gi399528830)  1e-28  Click
27 1351483..1351662  PHAGE_Salmon_vB_SosS_Oslo: NinZ protein; SPC_1290; phage(gi399528831)  9e-27  Click
28 1351986..1352177  PHAGE_Escher_HK75: antitermination protein Q; SPC_1291; phage(gi356870728)  1e-30  Click
29 1352240..1352314  tRNA  N/A  Click
30 1352320..1352395  tRNA  N/A  Click
31 1352644..1352961  PHAGE_Entero_IME10: holin; SPC_1292; phage(gi422934276)  2e-54  Click
32 1352948..1353421  PHAGE_Escher_HK75: lysozyme; SPC_1293; phage(gi356870730)  1e-87  Click
33 1353418..1353885  PHAGE_Salmon_SE1: Gp15; SPC_1294; phage(gi219681237)  1e-76  Click
34 1354272..1354784  PHAGE_Salmon_SPN9CC: hypothetical protein; SPC_1295; phage(gi389060533)  2e-94  Click
35 1355227..1355469  PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SPC_1296; phage(gi399498861)  6e-39  Click
36 1355912..1357390  PHAGE_Entero_HK620: terminase large subunit; SPC_1297; phage(gi13559866)  7e-168  Click
37 1357392..1359590  PHAGE_Bacter_2: portal protein; SPC_1298; phage(gi212499722)  0.0  Click
38 1359681..1360574  PHAGE_Entero_Sf6: gene 4 protein; SPC_1299; phage(gi41057282)  9e-29  Click
39 1360593..1361846  PHAGE_Entero_P22: coat protein; SPC_1300; phage(gi9635538)  1e-34  Click
40 1361900..1362076  hypothetical protein; SPC_1301  N/A  Click
41 1362528..1363946  PHAGE_Entero_IME10: DNA stabilization protein; SPC_1302; phage(gi422934285)  0.0  Click
42 1363950..1364588  PHAGE_Entero_P22: head completion protein; SPC_1303; phage(gi51236728)  8e-78  Click
43 1364588..1365043  PHAGE_Salmon_epsilon34: Virion assembly protein; SPC_1304; phage(gi221328628)  2e-86  Click
44 1365046..1365741  PHAGE_Entero_IME10: DNA transfer protein; SPC_1305; phage(gi422934288)  2e-116  Click
45 1365751..1367046  PHAGE_Entero_IME10: gp20; SPC_1306; phage(gi422934289)  2e-140  Click
46 1367046..1369043  PHAGE_Entero_Sf6: gene 13 protein; SPC_1307; phage(gi41057291)  0.0  Click
47 complement(1369496..1369744)  PHAGE_Salmon_SPN9CC: regulatory protein; SPC_1308; phage(gi389060549)  5e-41  Click
48 1369880..1371631  PHAGE_Salmon_vB_SemP_Emek: tailspike protein; SPC_1309; phage(gi399498815)  5e-60  Click
49 complement(1371695..1372948)  PHAGE_Escher_TL_2011b: hypothetical protein; SPC_1310; phage(gi418487678)  8e-16  Click
50 1372817..1372828  attR    TAATCGTTTATT  N/A  Click
51 complement(1372984..1373103)  PHAGE_Entero_IME10: integrase; SPC_1311; phage(gi422934296)  1e-10  Click
Region 4, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1897596..1897607  attL    AAAAGAAAAAAC  N/A  Click
2 complement(1899697..1900395)  PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; SPC_1838; phage(gi414087193)  2e-15  Click
3 complement(1900419..1901075)  hypothetical protein; SPC_1839  N/A  Click
4 complement(1901183..1901413)  PHAGE_Pectob_ZF40: putative DNA polymerase; SPC_1840; phage(gi422936677)  6e-17  Click
5 1901545..1901925  hypothetical protein; SPC_1841  N/A  Click
6 1901977..1902801  cation transporter; SPC_1842  N/A  Click
7 1902818..1903171  PHAGE_Entero_PsP3: gp28; SPC_1843; phage(gi41057381)  4e-08  Click
8 1903478..1903538  attL    TTCTGTATTCCGGTCTTTTTGGTTATATCACATCCAAATCCAGTTTAACATTTCTTTTACA  N/A  Click
9 complement(1903545..1904273)  PHAGE_Entero_HK106: integrase; SPC_1844; phage(gi428783305)  4e-43  Click
10 1904317..1904511  hypothetical protein; SPC_1845  N/A  Click
11 1904591..1904773  PHAGE_Entero_HK106: tail fiber assembly protein; SPC_1846; phage(gi428783304)  3e-05  Click
12 1904861..1905436  PHAGE_Pseudo_Lu11: putative tail assembly protein; SPC_1847; phage(gi388684690)  6e-16  Click
13 complement(1905685..1905882)  hypothetical protein; SPC_1848  N/A  Click
14 complement(1906307..1907077)  hypothetical protein; SPC_1849  N/A  Click
15 complement(1907725..1908525)  hypothetical protein; SPC_1850  N/A  Click
16 1909392..1909452  attR    TTCTGTATTCCGGTCTTTTTGGTTATATCACATCCAAATCCAGTTTAACATTTCTTTTACA  N/A  Click
17 complement(1909459..1909728)  PHAGE_Entero_HK106: integrase; SPC_1851; phage(gi428783305)  2e-13  Click
18 1924120..1924131  attR    AAAAGAAAAAAC  N/A  Click
Region 5, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1903321..1903332  attL    TTTAGCCTGCAT  N/A  Click
2 1918009..1918176  PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; SPC_1863; phage(gi399528790)  2e-08  Click
3 complement(1918611..1918940)  PHAGE_Entero_HK630: integrase; SPC_1864; phage(gi428782814)  1e-12  Click
4 1919103..1919435  PROPHAGE_Escher_CFT073: transposase; SPC_1865; phage(gi26246249)  7e-38  Click
5 1919440..1919955  PROPHAGE_Escher_CFT073: transposase; SPC_1866; phage(gi26246249)  3e-77  Click
6 1919955..1920101  PROPHAGE_Escher_CFT073: transposase; SPC_1867; phage(gi26246249)  3e-18  Click
7 complement(1920438..1920578)  cytoplasmic protein; SPC_1868  N/A  Click
8 complement(1920744..1921013)  PHAGE_Bacter_2: hypothetical protein APSE233; SPC_1869; phage(gi212499738)  6e-09  Click
9 1921060..1921254  hypothetical protein; SPC_1870  N/A  Click
10 1921383..1921802  acetyltransferase; SPC_1871  N/A  Click
11 complement(1922175..1922651)  hypothetical protein; SPC_1872  N/A  Click
12 complement(1922979..1923374)  PHAGE_Entero_HK630: hypothetical protein; SPC_1873; phage(gi428782855)  4e-19  Click
13 1924214..1924225  attR    TTTAGCCTGCAT  N/A  Click
Region 6, total : 53 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2731554..2731745  PHAGE_Entero_mEp390: DinI-like family protein; SPC_2693; phage(gi428782688)  6e-25  Click
2 2732015..2732701  hypothetical protein; SPC_2694  N/A  Click
3 2732686..2732985  hypothetical protein; SPC_2695  N/A  Click
4 2733054..2733680  PHAGE_Pseudo_F116: hypothetical protein F116p67; SPC_2696; phage(gi56692976)  7e-31  Click
5 complement(2733812..2734060)  PHAGE_Stx2_c_1717: transposase; SPC_2697; phage(gi209447153)  3e-26  Click
6 complement(2734328..2735206)  PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; SPC_2698; phage(gi169257322)  2e-173  Click
7 2735168..2735181  attL    TGAGCAAAAAAATT  N/A  Click
8 complement(2735771..2736352)  PHAGE_Gifsy_2: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; SPC_2699; phage(gi169257321)  3e-111  Click
9 complement(2736352..2738559)  PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; SPC_2700; phage(gi169257320)  0.0  Click
10 complement(2738613..2738849)  PHAGE_Gifsy_2: hypothetical protein STM1049.2n.Gifsy2; SPC_2701; phage(gi169257319)  4e-39  Click
11 complement(2742315..2742857)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; SPC_2703; phage(gi169257316)  4e-97  Click
12 complement(2742917..2743528)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; SPC_2704; phage(gi169257315)  6e-126  Click
13 complement(2743664..2744359)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SPC_2705; phage(gi169257314)  1e-135  Click
14 2744677..2744982  PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SPC_2706; phage(gi169257313)  2e-56  Click
15 complement(2745099..2745596)  PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; SPC_2707; phage(gi169257312)  3e-93  Click
16 complement(2745695..2746027)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; SPC_2708; phage(gi169257311)  4e-60  Click
17 complement(2746024..2749110)  PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SPC_2709; phage(gi169257310)  0.0  Click
18 complement(2749091..2749354)  PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; SPC_2710; phage(gi169257309)  4e-43  Click
19 complement(2749417..2749815)  PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; SPC_2711; phage(gi169257308)  8e-70  Click
20 complement(2749861..2750610)  PHAGE_Gifsy_2: bacteriophage major tail protein; Lambda gpV homolog; SPC_2712; phage(gi169257307)  2e-141  Click
21 complement(2750622..2751023)  PHAGE_Gifsy_2: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SPC_2713; phage(gi169257306)  3e-71  Click
22 complement(2751020..2751586)  PHAGE_Gifsy_2: bacteriophage morphogenesis protein; Lambda gpZ homolog; SPC_2714; phage(gi169257305)  6e-103  Click
23 complement(2751567..2751833)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2715; phage(gi169257304)  2e-45  Click
24 complement(2751859..2752167)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2716; phage(gi169257303)  7e-51  Click
25 complement(2752273..2754327)  PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; SPC_2717; phage(gi169257302)  0.0  Click
26 complement(2754278..2755825)  PHAGE_Gifsy_2: bacteriophage portal protein; SPC_2718; phage(gi169257301)  0.0  Click
27 complement(2755822..2756028)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2719; phage(gi169257300)  1e-31  Click
28 complement(2756025..2758058)  PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, large subunit; SPC_2720; phage(gi169257299)  0.0  Click
29 complement(2758120..2758716)  PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; SPC_2721; phage(gi169257298)  5e-95  Click
30 complement(2758954..2759361)  PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SPC_2722; phage(gi169257297)  3e-64  Click
31 complement(2759358..2759822)  PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SPC_2723; phage(gi169257296)  3e-83  Click
32 complement(2759794..2760042)  PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SPC_2724; phage(gi169257295)  5e-41  Click
33 2760399..2761085  PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SPC_2725; phage(gi169257294)  2e-133  Click
34 complement(2761206..2761847)  PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SPC_2726; phage(gi169257244)  2e-95  Click
35 complement(2762020..2762631)  PHAGE_Gifsy_2: NinG; SPC_2727; phage(gi169257288)  3e-115  Click
36 complement(2762634..2762840)  PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; SPC_2728; phage(gi169257287)  1e-35  Click
37 complement(2762840..2763442)  PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SPC_2729; phage(gi169257286)  2e-110  Click
38 complement(2763777..2764016)  PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SPC_2730; phage(gi169257284)  2e-38  Click
39 complement(2764171..2764437)  PHAGE_Salmon_SPN3UB: hypothetical protein; SPC_2731; phage(gi423262434)  6e-47  Click
40 complement(2764531..2764812)  PHAGE_Entero_ES18: gp37; SPC_2732; phage(gi62362250)  2e-17  Click
41 complement(2764823..2764957)  hypothetical protein; SPC_2733  N/A  Click
42 complement(2765083..2765346)  PHAGE_Salmon_epsilon34: EaD-like protein; SPC_2734; phage(gi221328645)  3e-21  Click
43 complement(2765434..2765697)  PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; SPC_2735; phage(gi399528795)  3e-42  Click
44 complement(2765694..2766011)  PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; SPC_2736; phage(gi169257281)  1e-46  Click
45 complement(2766052..2766801)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; SPC_2737; phage(gi169257280)  9e-141  Click
46 complement(2766804..2767787)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SPC_2738; phage(gi169257279)  0.0  Click
47 complement(2767872..2768246)  PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SPC_2739; phage(gi169257278)  8e-54  Click
48 2768578..2768982  PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; SPC_2740; phage(gi169257276)  5e-15  Click
49 2769573..2769923  PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SPC_2741; phage(gi169257273)  1e-35  Click
50 2770050..2772977  PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SPC_2742; phage(gi169257272)  0.0  Click
51 2772988..2774097  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2743; phage(gi169257271)  0.0  Click
52 2774173..2774379  PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SPC_2744; phage(gi169257270)  2e-33  Click
53 2774420..2774704  PHAGE_Gifsy_1: hypothetical protein STM2635.Gifsy1; SPC_2745; phage(gi169257265)  8e-52  Click
54 2774421..2774434  attR    TGAGCAAAAAAATT  N/A  Click
55 complement(2774682..2775911)  PHAGE_Gifsy_1: bacteriophage integrase protein; SPC_2746; phage(gi169257266)  0.0  Click
Region 7, total : 44 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2735168..2735181  attL    TGAGCAAAAAAATT  N/A  Click
2 complement(2742315..2742857)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; SPC_2703; phage(gi169257316)  4e-97  Click
3 complement(2742917..2743528)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; SPC_2704; phage(gi169257315)  6e-126  Click
4 complement(2743664..2744359)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SPC_2705; phage(gi169257314)  1e-135  Click
5 2744677..2744982  PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SPC_2706; phage(gi169257313)  2e-56  Click
6 complement(2745099..2745596)  PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; SPC_2707; phage(gi169257312)  3e-93  Click
7 complement(2745695..2746027)  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; SPC_2708; phage(gi169257311)  4e-60  Click
8 complement(2746024..2749110)  PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SPC_2709; phage(gi169257310)  0.0  Click
9 complement(2749091..2749354)  PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; SPC_2710; phage(gi169257309)  4e-43  Click
10 complement(2749417..2749815)  PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; SPC_2711; phage(gi169257308)  8e-70  Click
11 complement(2749861..2750610)  PHAGE_Gifsy_2: bacteriophage major tail protein; Lambda gpV homolog; SPC_2712; phage(gi169257307)  2e-141  Click
12 complement(2750622..2751023)  PHAGE_Gifsy_2: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SPC_2713; phage(gi169257306)  3e-71  Click
13 complement(2751020..2751586)  PHAGE_Gifsy_2: bacteriophage morphogenesis protein; Lambda gpZ homolog; SPC_2714; phage(gi169257305)  6e-103  Click
14 complement(2751567..2751833)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2715; phage(gi169257304)  2e-45  Click
15 complement(2751859..2752167)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2716; phage(gi169257303)  7e-51  Click
16 complement(2752273..2754327)  PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; SPC_2717; phage(gi169257302)  0.0  Click
17 complement(2754278..2755825)  PHAGE_Gifsy_2: bacteriophage portal protein; SPC_2718; phage(gi169257301)  0.0  Click
18 complement(2755822..2756028)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2719; phage(gi169257300)  1e-31  Click
19 complement(2756025..2758058)  PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, large subunit; SPC_2720; phage(gi169257299)  0.0  Click
20 complement(2758120..2758716)  PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; SPC_2721; phage(gi169257298)  5e-95  Click
21 complement(2758954..2759361)  PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SPC_2722; phage(gi169257297)  3e-64  Click
22 complement(2759358..2759822)  PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SPC_2723; phage(gi169257296)  3e-83  Click
23 complement(2759794..2760042)  PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SPC_2724; phage(gi169257295)  5e-41  Click
24 2760399..2761085  PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SPC_2725; phage(gi169257294)  2e-133  Click
25 complement(2761206..2761847)  PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SPC_2726; phage(gi169257244)  2e-95  Click
26 complement(2762020..2762631)  PHAGE_Gifsy_2: NinG; SPC_2727; phage(gi169257288)  3e-115  Click
27 complement(2762634..2762840)  PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; SPC_2728; phage(gi169257287)  1e-35  Click
28 complement(2762840..2763442)  PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SPC_2729; phage(gi169257286)  2e-110  Click
29 complement(2763777..2764016)  PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SPC_2730; phage(gi169257284)  2e-38  Click
30 complement(2764171..2764437)  PHAGE_Salmon_SPN3UB: hypothetical protein; SPC_2731; phage(gi423262434)  6e-47  Click
31 complement(2764531..2764812)  PHAGE_Entero_ES18: gp37; SPC_2732; phage(gi62362250)  2e-17  Click
32 complement(2764823..2764957)  hypothetical protein; SPC_2733  N/A  Click
33 complement(2765083..2765346)  PHAGE_Salmon_epsilon34: EaD-like protein; SPC_2734; phage(gi221328645)  3e-21  Click
34 complement(2765434..2765697)  PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; SPC_2735; phage(gi399528795)  3e-42  Click
35 complement(2765694..2766011)  PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; SPC_2736; phage(gi169257281)  1e-46  Click
36 complement(2766052..2766801)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; SPC_2737; phage(gi169257280)  9e-141  Click
37 complement(2766804..2767787)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SPC_2738; phage(gi169257279)  0.0  Click
38 complement(2767872..2768246)  PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SPC_2739; phage(gi169257278)  8e-54  Click
39 2768578..2768982  PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; SPC_2740; phage(gi169257276)  5e-15  Click
40 2769573..2769923  PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SPC_2741; phage(gi169257273)  1e-35  Click
41 2770050..2772977  PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SPC_2742; phage(gi169257272)  0.0  Click
42 2772988..2774097  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SPC_2743; phage(gi169257271)  0.0  Click
43 2774173..2774379  PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SPC_2744; phage(gi169257270)  2e-33  Click
44 2774420..2774704  PHAGE_Gifsy_1: hypothetical protein STM2635.Gifsy1; SPC_2745; phage(gi169257265)  8e-52  Click
45 2774421..2774434  attR    TGAGCAAAAAAATT  N/A  Click
46 complement(2774682..2775911)  PHAGE_Gifsy_1: bacteriophage integrase protein; SPC_2746; phage(gi169257266)  0.0  Click
Region 8, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(4348029..4348757)  PHAGE_Entero_P1: PmgQ; SPC_4256; phage(gi46401711)  9e-34  Click
2 complement(4348954..4349304)  inner membrane protein; SPC_4257  N/A  Click
3 complement(4349495..4349950)  PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; SPC_4258; phage(gi418489075)  2e-24  Click
4 complement(4349947..4350510)  PHAGE_Haemop_Aaphi23: putative tail fiber assembly protein; SPC_4259; phage(gi31544054)  4e-07  Click
5 complement(4350568..4352226)  PHAGE_Entero_PsP3: gp19; SPC_4260; phage(gi41057371)  1e-76  Click
6 complement(4352229..4352861)  PHAGE_Burkho_BcepMu: gp51; SPC_4261; phage(gi48696961)  9e-26  Click
7 complement(4352854..4353969)  PHAGE_Burkho_BcepMu: gp50; SPC_4262; phage(gi48696960)  3e-105  Click
8 complement(4353960..4354274)  PHAGE_Burkho_BcepMu: gp49; SPC_4263; phage(gi48696959)  2e-31  Click
9 complement(4354483..4356030)  PHAGE_Salmon_epsilon34: GtrC; putative membrane protein; SPC_4264; phage(gi221328637)  2e-59  Click
10 complement(4356030..4356959)  PHAGE_Entero_SfV: bactoprenol glucosyltransferase; SPC_4265; phage(gi19549012)  9e-152  Click
11 complement(4356956..4357318)  PHAGE_Entero_SfV: putative flippase; SPC_4266; phage(gi19549013)  7e-48  Click
12 complement(4357645..4358367)  PHAGE_Burkho_BcepMu: gp48; SPC_4267; phage(gi48696958)  1e-39  Click
13 complement(4358377..4359420)  PHAGE_Burkho_BcepMu: gp47; SPC_4268; phage(gi48696957)  4e-80  Click
14 complement(4359408..4359617)  PHAGE_Burkho_BcepMu: gp46; SPC_4269; phage(gi48696956)  5e-19  Click
15 complement(4359617..4360570)  PHAGE_Burkho_BcepMu: gp45; SPC_4270; phage(gi48696955)  7e-46  Click
16 complement(4360570..4362924)  PHAGE_Burkho_BcepMu: gp44; SPC_4271; phage(gi48696954)  1e-65  Click
17 complement(4363109..4363426)  PHAGE_Burkho_BcepMu: gp41; SPC_4272; phage(gi48696951)  1e-09  Click
18 complement(4363478..4364002)  PHAGE_Burkho_BcepMu: gp40; SPC_4273; phage(gi48696950)  1e-68  Click
19 complement(4364002..4365429)  PHAGE_Burkho_BcepMu: gp39; SPC_4274; phage(gi48696949)  0.0  Click
20 complement(4365419..4365616)  PHAGE_Burkho_BcepMu: gp38; SPC_4275; phage(gi48696948)  2e-08  Click
21 complement(4365613..4366068)  PHAGE_Burkho_BcepMu: gp37; SPC_4276; phage(gi48696947)  2e-13  Click
22 complement(4366227..4366481)  PHAGE_Burkho_BcepMu: gp25; SPC_4277; phage(gi48696935)  2e-15  Click
23 complement(4366554..4367159)  PHAGE_Burkho_BcepMu: gp22; SPC_4278; phage(gi48696932)  9e-57  Click
24 complement(4367162..4367449)  PHAGE_Burkho_BcepMu: gp21; SPC_4279; phage(gi48696931)  1e-20  Click
25 4368024..4368371  PHAGE_Burkho_BcepMu: gp01; SPC_4280; phage(gi48696911)  4e-24  Click