Definition Agrobacterium vitis S4 chromosome 2, complete genome.
Accession NC_011988
Length 1,283,187
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 41 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1167710..1167727  attL    TCCCACCTCTTCCGCCAT  N/A  Click
2 complement(1167800..1168834)  PHAGE_Azospi_Cd: integrase; Avi_6147; phage(gi168495175)  4e-34  Click
3 complement(1168847..1169101)  hypothetical protein; Avi_6148  N/A  Click
4 complement(1170141..1170488)  PHAGE_Pseudo_LIT1: N4 gp22-like protein; Avi_6150; phage(gi282598888)  1e-26  Click
5 complement(1170804..1171625)  PHAGE_Caulob_CcrSwift: hypothetical protein; Avi_6151; phage(gi414089797)  1e-05  Click
6 complement(1171622..1172365)  PHAGE_Salmon_ST64B: hypothetical protein sb35; Avi_6152; phage(gi23505479)  6e-22  Click
7 complement(1172347..1172892)  hypothetical protein; Avi_6153  N/A  Click
8 complement(1172885..1174021)  PHAGE_Rhizob_3: p081; Avi_6154; phage(gi195546611)  9e-40  Click
9 complement(1174222..1174587)  hypothetical protein; Avi_6155  N/A  Click
10 complement(1174738..1175061)  hypothetical protein; Avi_6157  N/A  Click
11 complement(1175228..1175548)  hypothetical protein; Avi_6158  N/A  Click
12 complement(1175980..1176852)  PHAGE_Mycoba_Ramsey: gp49; Avi_6161; phage(gi206600230)  5e-07  Click
13 complement(1176917..1177267)  hypothetical protein; Avi_6162  N/A  Click
14 1177459..1178076  hypothetical protein; Avi_6163  N/A  Click
15 1178083..1178481  PHAGE_Sinorh_PBC5: hypothetical protein PBC5p60; Avi_6164; phage(gi18071275)  7e-16  Click
16 complement(1179028..1179360)  PHAGE_Rhodob_RcapMu: c-repressor; Avi_6165; phage(gi356870844)  7e-05  Click
17 1179433..1179627  PHAGE_Salisa_1: hypothetical protein; Avi_6166; phage(gi388570724)  6e-05  Click
18 1179624..1180028  hypothetical protein; Avi_6167  N/A  Click
19 1180097..1180555  hypothetical protein; Avi_6168  N/A  Click
20 1181421..1183196  PHAGE_Rhizob_3: p096; Avi_6173; phage(gi195546626)  6e-23  Click
21 1183422..1183769  hypothetical protein; Avi_6175  N/A  Click
22 1183766..1184938  PHAGE_Burkho_phi1026b: gp67; Avi_6177; phage(gi38707957)  2e-35  Click
23 1184935..1186230  PHAGE_Salmon_ST64B: putative replication protein; Avi_6178; phage(gi23505486)  4e-09  Click
24 1187055..1187486  PHAGE_Pseudo_PAJU2: putative endonuclease; Avi_6179; phage(gi209552497)  6e-20  Click
25 1187623..1188264  phage terminase small subunit P27 family; Avi_6181  N/A  Click
26 1188275..1190017  PHAGE_Entero_mEp235: terminase large subunit; Avi_6182; phage(gi428781812)  2e-53  Click
27 1190017..1191261  PHAGE_Salmon_ST64B: Portal Protein; Avi_6184; phage(gi23505449)  1e-40  Click
28 1191239..1192093  PHAGE_Entero_mEp235: head maturation protease; Avi_6185; phage(gi428781814)  2e-54  Click
29 1192103..1193518  PHAGE_Salmon_ST64B: Major capsid protein precursor; Avi_6186; phage(gi23505451)  1e-80  Click
30 1193571..1194008  PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; Avi_6187; phage(gi168495137)  4e-05  Click
31 1194071..1194667  PHAGE_Rhodob_RcapNL: hypothetical protein; Avi_6188; phage(gi461474967)  1e-24  Click
32 1194667..1194987  PHAGE_Burkho_KS9: head-tail adaptor gp7; Avi_6189; phage(gi255033739)  1e-07  Click
33 1194991..1195437  PHAGE_Tetras_SI1: hypothetical protein; Avi_6190; phage(gi472342243)  3e-08  Click
34 1195441..1195836  hypothetical protein; Avi_6192  N/A  Click
35 1195854..1196540  PHAGE_Entero_HK446: major tail subunit; Avi_6193; phage(gi428782203)  4e-09  Click
36 1196548..1196931  hypothetical protein; Avi_6194  N/A  Click
37 1196994..1197245  hypothetical protein; Avi_6195  N/A  Click
38 1197356..1199635  PHAGE_Geobac_E2: putative tail tape measure protein; Avi_6196; phage(gi148747742)  2e-63  Click
39 1199635..1200354  hypothetical protein; Avi_6197  N/A  Click
40 1200357..1200938  Transcription elongation factor; Avi_6198  N/A  Click
41 complement(1200917..1201228)  hypothetical protein; Avi_6199  N/A  Click
42 1201345..1203510  PHAGE_Rhizob_3: putative tail fiber protein H; Avi_6201; phage(gi195546553)  4e-12  Click
43 1208954..1208971  attR    TCCCACCTCTTCCGCCAT  N/A  Click