Definition | Rhodobacter sphaeroides KD131 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_011963 |
Length | 3,152,792 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(344279..345763) | PHAGE_Salini_CW02: putative tail fiber; RSKD131_0354; phage(gi423261944) | 2e-06 | Click |
2 | complement(345779..346669) | PHAGE_Salico_CGphi29: hypothetical protein; RSKD131_0355; phage(gi472340191) | 5e-22 | Click |
3 | complement(346669..351567) | PHAGE_Pseudo_vB_PaeS_PMG1: tail tape measure protein; RSKD131_0356; phage(gi374531664) | 2e-56 | Click |
4 | complement(351672..351917) | hypothetical protein; RSKD131_0357 | N/A | Click |
5 | complement(351992..352384) | hypothetical protein; RSKD131_0358 | N/A | Click |
6 | complement(352381..352824) | PHAGE_Strept_phiSASD1: gp14; RSKD131_0359; phage(gi298103499) | 1e-07 | Click |
7 | complement(352834..353214) | PHAGE_Tetras_SI1: hypothetical protein; RSKD131_0360; phage(gi472342242) | 8e-05 | Click |
8 | complement(353219..353386) | hypothetical protein; RSKD131_0361 | N/A | Click |
9 | complement(353383..353856) | PHAGE_Tetras_SI1: hypothetical protein; RSKD131_0362; phage(gi472342243) | 2e-11 | Click |
10 | complement(353853..354158) | PHAGE_Rhodob_RcapNL: phage head-tail adapter protein; RSKD131_0363; phage(gi461474968) | 2e-06 | Click |
11 | complement(354182..354688) | hypothetical protein; RSKD131_0364 | N/A | Click |
12 | complement(354693..354977) | PHAGE_Helico_2: hypothetical protein; RSKD131_0365; phage(gi370703002) | 6e-05 | Click |
13 | complement(355073..356398) | PHAGE_Rhodob_RcapNL: HK97 family major capsid protein; RSKD131_0366; phage(gi461474964) | 7e-51 | Click |
14 | 356653..357396 | transmembrane protein; RSKD131_0367 | N/A | Click |
15 | complement(357407..358321) | PHAGE_Rhodob_RcapNL: peptidase S49; RSKD131_0368; phage(gi461474963) | 3e-30 | Click |
16 | complement(358318..359553) | PHAGE_Xantho_CP1: putative head portal protein; RSKD131_0369; phage(gi431811001) | 8e-29 | Click |
Region 2, total : 20 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 346205..346219 | attL GGTGAAGGCGAACTC | N/A | Click |
2 | complement(360858..362516) | PHAGE_Burkho_KS9: terminase gp2; RSKD131_0372; phage(gi255033734) | 1e-84 | Click |
3 | complement(362503..362940) | PHAGE_Mycoba_Porky: gp5; RSKD131_0373; phage(gi194303301) | 9e-08 | Click |
4 | complement(363203..363616) | PHAGE_Bacill_phi105: hypothetical protein phi105_50; RSKD131_0374; phage(gi22855043) | 3e-23 | Click |
5 | complement(363721..364260) | hypothetical protein; RSKD131_0375 | N/A | Click |
6 | complement(364466..365044) | hypothetical protein; RSKD131_0376 | N/A | Click |
7 | complement(365248..365904) | PHAGE_Pseudo_phi297: putative DNA replication protein O; RSKD131_0377; phage(gi374531278) | 6e-11 | Click |
8 | complement(365944..366495) | PHAGE_Rhodob_RcapNL: hypothetical protein; RSKD131_0378; phage(gi461475017) | 4e-25 | Click |
9 | complement(366492..366770) | hypothetical protein; RSKD131_0379 | N/A | Click |
10 | complement(366767..366979) | hypothetical protein; RSKD131_0380 | N/A | Click |
11 | complement(367096..367308) | hypothetical protein; RSKD131_0381 | N/A | Click |
12 | 368009..368218 | hypothetical protein; RSKD131_0382 | N/A | Click |
13 | 368215..368547 | hypothetical protein; RSKD131_0383 | N/A | Click |
14 | 368547..368942 | PHAGE_Loktan_pCB2051_A: hypothetical protein; RSKD131_0384; phage(gi472341435) | 5e-22 | Click |
15 | 369065..370876 | PHAGE_Salmon_E1: phage-related DNA-binding protein; RSKD131_0385; phage(gi170676297) | 6e-06 | Click |
16 | 371039..371182 | PHAGE_Rhodob_RcapNL: hypothetical protein; RSKD131_0386; phage(gi461474992) | 1e-07 | Click |
17 | 371140..371154 | attR GGTGAAGGCGAACTC | N/A | Click |
18 | 371266..372207 | PHAGE_Rhodob_RcapNL: phage integrase/recombinase; RSKD131_0387; phage(gi461474991) | 1e-68 | Click |
19 | complement(372241..372317) | tRNA | N/A | Click |
20 | complement(372361..372831) | GCN5-like N-acetyltransferase; RSKD131_0388 | N/A | Click |
21 | complement(373147..373422) | ETC complex I subunit conserved region; RSKD131_0389 | N/A | Click |
22 | complement(373549..373722) | UvrB protein; RSKD131_0390 | N/A | Click |
23 | 373714..375897 | PHAGE_Acidia_filamentous_virus_9: putative helicase; RSKD131_0391; phage(gi171473669) | 1e-07 | Click |
Region 3, total : 19 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 788173..789471 | PHAGE_Strept_mu1_6: terminase large subunit; RSKD131_0782; phage(gi93007440) | 4e-64 | Click |
2 | 789538..790719 | PHAGE_Marino_P12026: phage portal protein, HK97 family; RSKD131_0783; phage(gi399528319) | 3e-19 | Click |
3 | 790721..790954 | hypothetical protein; RSKD131_0784 | N/A | Click |
4 | 790965..791522 | PHAGE_Tetras_SI1: phage prohead protease; RSKD131_0785; phage(gi472342256) | 1e-25 | Click |
5 | 791588..792784 | PHAGE_Salmon_ST64B: Major capsid protein precursor; RSKD131_0786; phage(gi23505451) | 2e-67 | Click |
6 | 792880..793479 | PHAGE_Rhizob_16_3: p008; RSKD131_0787; phage(gi195546539) | 2e-05 | Click |
7 | 793479..793814 | Phage head-tail adaptor; RSKD131_0788 | N/A | Click |
8 | 793811..794209 | hypothetical protein; RSKD131_0789 | N/A | Click |
9 | 794247..794660 | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; RSKD131_0790; phage(gi461474972) | 9e-20 | Click |
10 | 794660..794977 | hypothetical protein; RSKD131_0791 | N/A | Click |
11 | 794979..795179 | hypothetical protein; RSKD131_0792 | N/A | Click |
12 | 795172..795822 | PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; RSKD131_0793; phage(gi428782128) | 2e-13 | Click |
13 | 795823..796464 | PHAGE_Roseob_1: putative glycoside hydrolase; RSKD131_0794; phage(gi331028135) | 7e-45 | Click |
14 | 796464..797348 | PHAGE_Tetras_SI1: hypothetical protein; RSKD131_0795; phage(gi472342235) | 5e-28 | Click |
15 | 797345..797785 | PHAGE_Rhodob_RcapMu: putative tail assembly protein; RSKD131_0796; phage(gi356870891) | 6e-05 | Click |
16 | 797785..801675 | PHAGE_Tetras_SI1: hypothetical protein; RSKD131_0797; phage(gi472342233) | 3e-33 | Click |
17 | 802115..802891 | Serine O-acetyltransferase; RSKD131_0798 | N/A | Click |
18 | complement(802991..804319) | PHAGE_Equid_herpesvirus_4: large tegument protein; RSKD131_0799; phage(gi9629749) | 5e-08 | Click |
19 | complement(804330..805703) | PHAGE_Synech_S_SM2: transketolase central region-containing protein; RSKD131_0800; phage(gi326781943) | 1e-10 | Click |
Region 4, total : 11 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1486529..1488019 | PHAGE_Lactob_KC5a: putative minor tail protein; RSKD131_1451; phage(gi90592623) | 3e-05 | Click |
2 | complement(1488324..1488713) | hypothetical protein; RSKD131_1452 | N/A | Click |
3 | 1488705..1488824 | hypothetical protein; RSKD131_1453 | N/A | Click |
4 | 1489255..1489267 | attL AGGCCGCCCCGCC | N/A | Click |
5 | complement(1489302..1489375) | tRNA | N/A | Click |
6 | complement(1489886..1489999) | hypothetical protein; RSKD131_1454 | N/A | Click |
7 | 1490367..1490378 | attL GCGCCGGGTTTG | N/A | Click |
8 | 1490414..1490737 | PHAGE_Entero_BP_4795: putative transposase OrfA protein of IS629; RSKD131_1455; phage(gi157166066) | 3e-28 | Click |
9 | 1490734..1491642 | PHAGE_Entero_BP_4795: putative transposase OrfB protein of IS629; RSKD131_1456; phage(gi157166067) | 5e-97 | Click |
10 | 1491932..1492072 | hypothetical protein; RSKD131_1457 | N/A | Click |
11 | 1493206..1493433 | IS3 family transposase orfA; RSKD131_1458 | N/A | Click |
12 | 1493475..1493609 | Integrase catalytic subunit; RSKD131_1459 | N/A | Click |
13 | 1493613..1493624 | attR GCGCCGGGTTTG | N/A | Click |
14 | complement(1493646..1494494) | PHAGE_Entero_BP_4795: putative transposase OrfB protein of IS629; RSKD131_1460; phage(gi157166067) | 5e-93 | Click |
15 | complement(1494551..1494841) | PHAGE_Entero_BP_4795: putative transposase OrfA protein of IS629; RSKD131_1461; phage(gi157166066) | 7e-25 | Click |
16 | 1507685..1507697 | attR AGGCCGCCCCGCC | N/A | Click |
Region 5, total : 11 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1497699..1498508) | PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp61; RSKD131_1466; phage(gi331028115) | 4e-63 | Click |
2 | complement(1498563..1498757) | PHAGE_Burkho_phiE125: DNA adenine methylase; RSKD131_1467; phage(gi17975188) | 2e-05 | Click |
3 | complement(1498821..1500482) | PHAGE_Stx2_converting_1717: transposase; RSKD131_1468; phage(gi209447153) | 2e-72 | Click |
4 | complement(1500628..1500906) | PHAGE_Stx2_converting_1717: transposase; RSKD131_1469; phage(gi209447152) | 5e-21 | Click |
5 | complement(1500924..1501271) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; RSKD131_1470; phage(gi17546153) | 6e-05 | Click |
6 | complement(1501322..1502023) | PHAGE_Rhizob_RR1_B: adenine specific DNA methyltransferase; RSKD131_1471; phage(gi514231187) | 4e-67 | Click |
7 | complement(1502913..1503230) | PHAGE_Rhodob_RcapNL: hypothetical protein; RSKD131_1472; phage(gi461474983) | 4e-26 | Click |
8 | complement(1503361..1503675) | hypothetical protein; RSKD131_1473 | N/A | Click |
9 | complement(1503700..1504017) | PHAGE_Pseudo_MP42: hypothetical protein; RSKD131_1474; phage(gi399528628) | 2e-05 | Click |
10 | complement(1504024..1505508) | PHAGE_Salini_CW02: putative tail fiber; RSKD131_1475; phage(gi423261944) | 1e-06 | Click |
11 | complement(1505524..1505856) | PHAGE_Salico_CGphi29: hypothetical protein; RSKD131_1476; phage(gi472340191) | 6e-05 | Click |
Region 6, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(3085015..3085620) | PHAGE_Rhizob_RR1_A: hypothetical protein; RSKD131_3022; phage(gi514231499) | 5e-05 | Click |
2 | complement(3085627..3086250) | PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp61; RSKD131_3023; phage(gi331028115) | 1e-63 | Click |
3 | complement(3086287..3086436) | hypothetical protein; RSKD131_3024 | N/A | Click |
4 | complement(3086491..3087270) | PHAGE_Rhizob_RR1_B: adenine specific DNA methyltransferase; RSKD131_3025; phage(gi514231187) | 1e-75 | Click |
5 | complement(3088367..3088684) | PHAGE_Rhodob_RcapNL: hypothetical protein; RSKD131_3026; phage(gi461474983) | 3e-26 | Click |
6 | complement(3088920..3089234) | hypothetical protein; RSKD131_3027 | N/A | Click |
7 | complement(3089259..3089576) | PHAGE_Pseudo_MP42: hypothetical protein; RSKD131_3028; phage(gi399528628) | 3e-05 | Click |
8 | complement(3089583..3091067) | PHAGE_Salini_CW02: putative tail fiber; RSKD131_3029; phage(gi423261944) | 1e-06 | Click |
9 | complement(3091083..3091973) | PHAGE_Salico_CGphi29: hypothetical protein; RSKD131_3030; phage(gi472340191) | 2e-21 | Click |
10 | complement(3091973..3092791) | PHAGE_Rhodob_RcapMu: tape measure protein; RSKD131_3031; phage(gi356870888) | 3e-11 | Click |
11 | complement(3092788..3096945) | PHAGE_Pseudo_vB_PaeS_PMG1: tail tape measure protein; RSKD131_3032; phage(gi374531664) | 4e-61 | Click |
12 | complement(3097021..3097179) | hypothetical protein; RSKD131_3033 | N/A | Click |
13 | complement(3097341..3097733) | hypothetical protein; RSKD131_3034 | N/A | Click |
14 | complement(3097730..3098170) | PHAGE_Strept_phiSASD1: gp14; RSKD131_3035; phage(gi298103499) | 7e-08 | Click |
15 | complement(3098180..3098560) | PHAGE_Tetras_SI1: hypothetical protein; RSKD131_3036; phage(gi472342242) | 6e-05 | Click |
16 | complement(3098564..3099034) | PHAGE_Tetras_SI1: hypothetical protein; RSKD131_3037; phage(gi472342243) | 1e-11 | Click |
17 | complement(3099031..3099336) | PHAGE_Rhodob_RcapNL: phage head-tail adapter protein; RSKD131_3038; phage(gi461474968) | 2e-06 | Click |
18 | complement(3099360..3099866) | hypothetical protein; RSKD131_3039 | N/A | Click |
19 | complement(3099871..3100167) | hypothetical protein; RSKD131_3040 | N/A | Click |
20 | complement(3100265..3101590) | PHAGE_Rhodob_RcapNL: HK97 family major capsid protein; RSKD131_3041; phage(gi461474964) | 1e-50 | Click |
21 | complement(3101941..3102063) | hypothetical protein; RSKD131_3042 | N/A | Click |
22 | complement(3102670..3103587) | PHAGE_Rhodob_RcapNL: peptidase S49; RSKD131_3043; phage(gi461474963) | 3e-30 | Click |
23 | complement(3103584..3104786) | PHAGE_Xantho_CP1: putative head portal protein; RSKD131_3044; phage(gi431811001) | 1e-28 | Click |