| Definition | Clostridium kluyveri NBRC 12016, complete genome. |
|---|---|
| Accession | NC_011837 |
| Length | 3,896,121 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 45 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1927925..1928122) | PHAGE_Lactoc_bIL312: Csp; CKR_1691; phage(gi13095918) | 7e-20 | Click |
| 2 | 1928960..1929634 | hypothetical protein; CKR_1692 | N/A | Click |
| 3 | 1929631..1930785 | PHAGE_Clostr_phiCD27: putative phage DNA-binding protein; CKR_1693; phage(gi209901309) | 1e-47 | Click |
| 4 | complement(1931400..1931774) | PHAGE_Clostr_c_st: hypothetical protein CST154; CKR_1694; phage(gi80159840) | 6e-13 | Click |
| 5 | complement(1931891..1932139) | hypothetical protein; CKR_1695 | N/A | Click |
| 6 | complement(1932181..1932432) | PHAGE_Clostr_phiCP26F: hypothetical protein; CKR_1696; phage(gi422933951) | 5e-18 | Click |
| 7 | complement(1932518..1933357) | PHAGE_Clostr_c_st: putative N-acetylmuramoyl-L-alanine amidase; CKR_1697; phage(gi80159841) | 3e-23 | Click |
| 8 | complement(1933374..1933628) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1698; phage(gi414090397) | 6e-05 | Click |
| 9 | complement(1934039..1934680) | hypothetical protein; CKR_1699 | N/A | Click |
| 10 | complement(1934832..1935275) | PHAGE_Phaeoc_virus: hypothetical protein; CKR_1700; phage(gi508181974) | 6e-05 | Click |
| 11 | complement(1935294..1935986) | PHAGE_Parame_bursaria_Chlorella_virus_AR158: hypothetical protein AR158_c027R; CKR_1701; phage(gi157953218) | 8e-22 | Click |
| 12 | complement(1935976..1937319) | PHAGE_Erwini_phiEaH2: putative radical SAM superfamily protein; CKR_1702; phage(gi431810653) | 1e-17 | Click |
| 13 | complement(1937709..1938497) | PHAGE_Clostr_phiMMP02: tail fiber; CKR_1703; phage(gi414090390) | 7e-43 | Click |
| 14 | complement(1938501..1939133) | PHAGE_Clostr_phiMMP02: XkdT-related protein; CKR_1704; phage(gi414090389) | 3e-57 | Click |
| 15 | complement(1939120..1940250) | PHAGE_Clostr_phiMMP02: baseplate J family protein; CKR_1705; phage(gi414090388) | 5e-108 | Click |
| 16 | complement(1940255..1940725) | PHAGE_Clostr_phiMMP02: XkdS-related protein; CKR_1706; phage(gi414090387) | 4e-32 | Click |
| 17 | complement(1940718..1941056) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1707; phage(gi414090386) | 4e-25 | Click |
| 18 | complement(1941031..1942017) | PHAGE_Clostr_phiMMP02: XkdQ-related protein; CKR_1708; phage(gi414090385) | 1e-84 | Click |
| 19 | complement(1942026..1942784) | PHAGE_Clostr_phiMMP02: peptidoglycan-binding LysM protein; CKR_1709; phage(gi414090384) | 2e-32 | Click |
| 20 | complement(1943059..1943568) | PHAGE_Clostr_phi_CD119: hypothetical protein CDBPCV119_gp21; CKR_1710; phage(gi90592657) | 3e-06 | Click |
| 21 | complement(1943575..1947315) | PHAGE_Lactob_prophage_Lj965: putative putative minor tail protein; CKR_1711; phage(gi41179260) | 8e-26 | Click |
| 22 | complement(1947515..1948255) | PHAGE_Clostr_phiMMP02: tail tape measure; CKR_1712; phage(gi414090382) | 3e-15 | Click |
| 23 | complement(1948621..1949046) | hypothetical protein; CKR_1713 | N/A | Click |
| 24 | complement(1949685..1950113) | PHAGE_Staphy_S24_1: structure protein putative minor tail protein; CKR_1714; phage(gi371671333) | 5e-05 | Click |
| 25 | complement(1950394..1951242) | PHAGE_Clostr_phiMMP02: phage repressor; CKR_1715; phage(gi414090441) | 1e-11 | Click |
| 26 | 1951716..1952501 | PHAGE_Clostr_PhiS63: gp36; CKR_1716; phage(gi388570662) | 1e-11 | Click |
| 27 | complement(1952840..1953553) | PHAGE_Clostr_c_st: putative antirepressor; CKR_1717; phage(gi80159698) | 4e-26 | Click |
| 28 | complement(1953751..1954590) | hypothetical protein; CKR_1718 | N/A | Click |
| 29 | complement(1954878..1955333) | PHAGE_Clostr_phiMMP02: XkdN-related protein; CKR_1719; phage(gi414090380) | 3e-30 | Click |
| 30 | complement(1955415..1955822) | PHAGE_Bacill_phi105: hypothetical protein phi105_48; CKR_1720; phage(gi22855041) | 2e-28 | Click |
| 31 | complement(1955859..1956092) | hypothetical protein; CKR_1721 | N/A | Click |
| 32 | complement(1956118..1956534) | PHAGE_Clostr_phiMMP02: XkdM-related protein; CKR_1722; phage(gi414090379) | 2e-23 | Click |
| 33 | complement(1956553..1957971) | PHAGE_Clostr_phiMMP02: tail sheath; CKR_1723; phage(gi414090378) | 5e-130 | Click |
| 34 | complement(1957973..1958407) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1724; phage(gi414090377) | 5e-12 | Click |
| 35 | complement(1958411..1959238) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1725; phage(gi414090376) | 5e-63 | Click |
| 36 | complement(1959242..1959676) | PHAGE_Clostr_phiMMP02: putative tail component; CKR_1726; phage(gi414090375) | 3e-34 | Click |
| 37 | complement(1959652..1960086) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1727; phage(gi414090374) | 8e-26 | Click |
| 38 | complement(1960407..1961441) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1728; phage(gi414090372) | 2e-116 | Click |
| 39 | complement(1961457..1961834) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1729; phage(gi414090371) | 4e-33 | Click |
| 40 | complement(1961855..1963330) | PHAGE_Clostr_phiMMP02: hypothetical protein; CKR_1730; phage(gi414090370) | 4e-135 | Click |
| 41 | complement(1963479..1963895) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp5; CKR_1731; phage(gi304360667) | 6e-08 | Click |
| 42 | complement(1964187..1965518) | PHAGE_Clostr_phiMMP02: head morphogenesis protein; CKR_1732; phage(gi414090369) | 3e-95 | Click |
| 43 | complement(1965511..1967031) | PHAGE_Clostr_phiMMP02: portal protein; CKR_1733; phage(gi414090368) | 0.0 | Click |
| 44 | complement(1967022..1968293) | PHAGE_Deep_s_D6E: large subunit terminase; CKR_1734; phage(gi423262329) | 3e-75 | Click |
| 45 | complement(1968283..1969065) | PHAGE_Clostr_phiMMP02: terminase small subunit; CKR_1735; phage(gi414090366) | 4e-53 | Click |
Region 2, total : 11 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2623496..2623511 | attL CTCCTTTCAATATCAA | N/A | Click |
| 2 | complement(2626952..2628523) | PHAGE_Bacill_Gamma: site-specific recombinase; CKR_2321; phage(gi77020163) | 9e-29 | Click |
| 3 | complement(2628527..2628940) | hypothetical protein; CKR_2322 | N/A | Click |
| 4 | complement(2628941..2630530) | PHAGE_Bacill_WBeta: putative site-specific recombinase; CKR_2323; phage(gi85701406) | 7e-40 | Click |
| 5 | complement(2630998..2631708) | PHAGE_Bacill_phiNIT1: putative N-acetylmuramoyl-L-alanine amidase; CKR_2324; phage(gi526118459) | 3e-06 | Click |
| 6 | complement(2631717..2633111) | hypothetical protein; CKR_2325 | N/A | Click |
| 7 | complement(2633108..2633563) | PHAGE_Bacill_WBeta: phage holin; CKR_2326; phage(gi85701395) | 9e-26 | Click |
| 8 | complement(2633633..2636104) | PHAGE_Equid_herpesvirus_4: envelope glycoprotein J; CKR_2327; phage(gi9629801) | 1e-09 | Click |
| 9 | complement(2636116..2636619) | PHAGE_Lactoc_r1t: Structural protein; CKR_2328; phage(gi23455764) | 1e-14 | Click |
| 10 | complement(2636637..2638559) | PHAGE_Lactoc_r1t: hypothetical protein r1tp44; CKR_2329; phage(gi23455763) | 3e-22 | Click |
| 11 | complement(2638556..2639407) | PHAGE_Lactoc_r1t: hypothetical protein r1tp43; CKR_2330; phage(gi23455762) | 4e-13 | Click |
| 12 | complement(2639421..2641841) | PHAGE_Entero_phiFL1A: PblA-like tail protein; CKR_2331; phage(gi281416377) | 6e-43 | Click |
| 13 | 2642465..2642480 | attR CTCCTTTCAATATCAA | N/A | Click |
Region 3, total : 48 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3228291..3228875) | PHAGE_Xylell_Xfas53: inner membrane protein; CKR_2857; phage(gi273810461) | 2e-08 | Click |
| 2 | complement(3229139..3229558) | PHAGE_Clostr_c_st: hypothetical protein CST154; CKR_2858; phage(gi80159840) | 6e-14 | Click |
| 3 | complement(3229579..3229953) | PHAGE_Bacill_BCP78: hypothetical protein; CKR_2859; phage(gi410492926) | 2e-12 | Click |
| 4 | complement(3230070..3230318) | hypothetical protein; CKR_2860 | N/A | Click |
| 5 | 3230251..3230263 | attL ACATCTTCTGCAT | N/A | Click |
| 6 | complement(3230426..3232078) | PHAGE_Bacill_phBC6A51: Site-specific recombinase; CKR_2861; phage(gi31415812) | 6e-28 | Click |
| 7 | complement(3232415..3233314) | PHAGE_Shigel_SfII: major capsid protein; CKR_2862; phage(gi526244641) | 4e-28 | Click |
| 8 | complement(3233588..3235897) | PHAGE_Lister_LP_030_2: phage-associated DNA primase/helicase; CKR_2863; phage(gi514051992) | 6e-106 | Click |
| 9 | 3236529..3236777 | hypothetical protein; CKR_2864 | N/A | Click |
| 10 | 3236761..3238740 | PHAGE_Campyl_NCTC12673: possible methylase; CKR_2865; phage(gi332672404) | 3e-33 | Click |
| 11 | 3238737..3241715 | PHAGE_Entero_P1: Res; CKR_2866; phage(gi46401632) | 3e-156 | Click |
| 12 | 3241738..3243357 | PHAGE_Entero_P2: Old; CKR_2867; phage(gi9630369) | 1e-19 | Click |
| 13 | complement(3243482..3243733) | PHAGE_Clostr_phiCP26F: hypothetical protein; CKR_2868; phage(gi422933951) | 6e-19 | Click |
| 14 | complement(3243819..3244739) | PHAGE_Clostr_phiCTP1: endolysin; CKR_2869; phage(gi304360691) | 4e-63 | Click |
| 15 | complement(3244752..3245144) | PHAGE_Clostr_phiCTP1: predicted holin; CKR_2870; phage(gi304360690) | 8e-45 | Click |
| 16 | complement(3245557..3245901) | hypothetical protein; CKR_2871 | N/A | Click |
| 17 | complement(3245917..3247602) | PHAGE_Tsukam_TPA2: putative tail fiber protein; CKR_2872; phage(gi326425064) | 2e-07 | Click |
| 18 | complement(3247614..3248234) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp23; CKR_2873; phage(gi209901260) | 1e-07 | Click |
| 19 | complement(3248238..3249878) | PHAGE_Bacill_BCD7: putative tail fiber protein; CKR_2874; phage(gi422936034) | 1e-16 | Click |
| 20 | complement(3249882..3250994) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp22; CKR_2875; phage(gi209901259) | 2e-73 | Click |
| 21 | complement(3251014..3251472) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp21; CKR_2876; phage(gi209901258) | 8e-35 | Click |
| 22 | complement(3251473..3251802) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp20; CKR_2877; phage(gi209901257) | 5e-22 | Click |
| 23 | complement(3251777..3252763) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp19; CKR_2878; phage(gi209901256) | 3e-85 | Click |
| 24 | complement(3252774..3253550) | PHAGE_Clostr_phiCD27: putative peptidoglycan-binding LysM; CKR_2879; phage(gi209901255) | 1e-33 | Click |
| 25 | complement(3253805..3254323) | PHAGE_Clostr_phi_CD119: hypothetical protein CDBPCV119_gp21; CKR_2880; phage(gi90592657) | 2e-06 | Click |
| 26 | complement(3254330..3258157) | PHAGE_Clostr_phiCD27: putative phage tail tape measure protein; CKR_2881; phage(gi209901253) | 1e-92 | Click |
| 27 | complement(3258334..3258771) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp15; CKR_2882; phage(gi209901252) | 3e-27 | Click |
| 28 | complement(3259109..3259915) | PHAGE_Escher_TL_2011c: hypothetical protein; CKR_2883; phage(gi418487090) | 2e-25 | Click |
| 29 | complement(3260492..3261328) | hypothetical protein; CKR_2884 | N/A | Click |
| 30 | complement(3261403..3261813) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp14; CKR_2885; phage(gi209901251) | 1e-21 | Click |
| 31 | complement(3261824..3263251) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp13; CKR_2886; phage(gi209901250) | 2e-133 | Click |
| 32 | complement(3263253..3263564) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp12; CKR_2887; phage(gi209901249) | 1e-10 | Click |
| 33 | complement(3263591..3264406) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp11; CKR_2888; phage(gi209901248) | 3e-75 | Click |
| 34 | complement(3264654..3265079) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp10; CKR_2889; phage(gi209901247) | 8e-14 | Click |
| 35 | complement(3265093..3265485) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp09; CKR_2890; phage(gi209901246) | 2e-14 | Click |
| 36 | complement(3265485..3265805) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp14; CKR_2891; phage(gi304360676) | 6e-16 | Click |
| 37 | complement(3266101..3267150) | PHAGE_Clostr_phiCTP1: hypothetical phage capsid protein; CKR_2892; phage(gi304360674) | 4e-93 | Click |
| 38 | complement(3267168..3267560) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp11; CKR_2893; phage(gi304360673) | 8e-10 | Click |
| 39 | complement(3267583..3268188) | PHAGE_Clostr_phiCTP1: putative scaffold protein; CKR_2894; phage(gi304360672) | 5e-29 | Click |
| 40 | complement(3268752..3269174) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp5; CKR_2895; phage(gi304360667) | 3e-07 | Click |
| 41 | complement(3269519..3269830) | hypothetical protein; CKR_2896 | N/A | Click |
| 42 | complement(3269811..3271226) | PHAGE_Clostr_phiCD27: putative head morphogenesis protein; CKR_2897; phage(gi209901241) | 7e-24 | Click |
| 43 | complement(3271229..3272752) | PHAGE_Strept_Dp_1: portal protein; CKR_2898; phage(gi327198352) | 1e-62 | Click |
| 44 | complement(3272752..3274104) | PHAGE_Bacill_PM1: hypothetical protein; CKR_2899; phage(gi472438300) | 6e-156 | Click |
| 45 | complement(3274104..3274958) | PHAGE_Bacill_BCJA1c: terminase small subunit; CKR_2900; phage(gi56694901) | 9e-61 | Click |
| 46 | 3275615..3275806 | PHAGE_Haemop_HP2: hypothetical protein HP2p13; CKR_2901; phage(gi19289355) | 3e-08 | Click |
| 47 | 3275861..3276265 | PHAGE_Clostr_phi_CD119: hypothetical protein CDBPCV119_gp44; CKR_2902; phage(gi90592680) | 1e-40 | Click |
| 48 | 3276968..3277252 | hypothetical protein; CKR_2903 | N/A | Click |
| 49 | complement(3277346..3277792) | PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; CKR_2904; phage(gi509140084) | 6e-24 | Click |
| 50 | 3285864..3285876 | attR ACATCTTCTGCAT | N/A | Click |
Region 4, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3279621..3280529) | PHAGE_Lactob_Lc_Nu: putative methylase; CKR_2908; phage(gi78000013) | 5e-46 | Click |
| 2 | complement(3280575..3280904) | hypothetical protein; CKR_2909 | N/A | Click |
| 3 | complement(3280901..3281734) | PHAGE_Clostr_phiSM101: putative modification methylase dpniia; CKR_2910; phage(gi110804053) | 9e-23 | Click |
| 4 | complement(3281971..3283314) | PHAGE_Strept_pyogenes_315_1: putative DNA polymerase III delta prime subunit; CKR_2911; phage(gi28876155) | 3e-83 | Click |
| 5 | complement(3283318..3284256) | PHAGE_Staphy_PH15: hypothetical protein ph49; CKR_2912; phage(gi119967881) | 1e-44 | Click |
| 6 | complement(3284372..3285244) | PHAGE_Deep_s_D6E: hypothetical protein; CKR_2913; phage(gi423262359) | 5e-67 | Click |
| 7 | complement(3285260..3285748) | PHAGE_Deep_s_D6E: gp157-like protein; CKR_2914; phage(gi423262358) | 9e-32 | Click |
| 8 | complement(3285752..3285994) | hypothetical protein; CKR_2915 | N/A | Click |
| 9 | complement(3286185..3286484) | hypothetical protein; CKR_2916 | N/A | Click |
| 10 | complement(3286630..3287049) | PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp28; CKR_2917; phage(gi197261538) | 3e-12 | Click |
| 11 | complement(3287227..3287547) | hypothetical protein; CKR_2918 | N/A | Click |
| 12 | complement(3288521..3289288) | PHAGE_Lactoc_bIL285: anti-repressor; CKR_2919; phage(gi13095686) | 1e-16 | Click |
| 13 | complement(3289310..3289792) | hypothetical protein; CKR_2920 | N/A | Click |
| 14 | complement(3290201..3290443) | PHAGE_Clostr_PhiS63: gp26; CKR_2921; phage(gi388570671) | 5e-07 | Click |
| 15 | 3290581..3290907 | PHAGE_Clostr_PhiS63: gp36; CKR_2922; phage(gi388570662) | 1e-06 | Click |
| 16 | 3290928..3291227 | hypothetical protein; CKR_2923 | N/A | Click |
| 17 | complement(3291293..3291544) | PHAGE_Lister_A500: gp34; CKR_2924; phage(gi157324993) | 2e-05 | Click |
| 18 | 3291702..3292304 | PHAGE_Lister_B054: gp41; CKR_2925; phage(gi157325325) | 3e-17 | Click |
| 19 | 3292796..3294055 | hypothetical protein; CKR_2926 | N/A | Click |
| 20 | 3294146..3294391 | hypothetical protein; CKR_2927 | N/A | Click |
| 21 | 3294545..3296200 | PHAGE_Clostr_vB_CpeS_CP51: putative resolvase; CKR_2928; phage(gi509140068) | 2e-104 | Click |