Definition Desulfovibrio vulgaris str. 'Miyazaki F', complete genome.
Accession NC_011769
Length 4,040,304
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 50 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(862570..863235)  PHAGE_Caulob_phiCbK: putative Ser/Thr protein phosphatase; DvMF_0709; phage(gi414087977)  1e-19  Click
2 complement(864144..864860)  PHAGE_Pseudo_MP22: c repressor; DvMF_0710; phage(gi157834973)  3e-21  Click
3 865149..865607  hypothetical protein; DvMF_0711  N/A  Click
4 865582..865824  hypothetical protein; DvMF_0712  N/A  Click
5 865833..868031  PHAGE_Pseudo_D3112: A transposase; DvMF_0713; phage(gi38229118)  4e-97  Click
6 868040..868822  PHAGE_Rhodob_RcapMu: transposition protein B; DvMF_0714; phage(gi356870854)  3e-32  Click
7 868823..869416  PHAGE_Rhodob_RcapMu: TroR domain transcriptional regulator; DvMF_0715; phage(gi356870855)  1e-15  Click
8 869406..869735  PHAGE_Rhodob_RcapMu: LacI-like regulatory protein; DvMF_0716; phage(gi356870856)  7e-16  Click
9 869737..870231  hypothetical protein; DvMF_0717  N/A  Click
10 870322..870774  hypothetical protein; DvMF_0718  N/A  Click
11 870777..871001  hypothetical protein; DvMF_0719  N/A  Click
12 870988..871428  PHAGE_Pseudo_JBD5: hypothetical protein; DvMF_0720; phage(gi448245005)  4e-25  Click
13 871425..871895  PHAGE_Pseudo_MP38: putative integral membrane protein; DvMF_0721; phage(gi215479943)  4e-20  Click
14 872838..873209  PHAGE_Pseudo_B3: holin; DvMF_0722; phage(gi56692592)  4e-06  Click
15 873212..874000  PHAGE_Pseudo_B3: endolysin; DvMF_0723; phage(gi56692593)  3e-60  Click
16 874000..874695  PHAGE_Pseudo_B3: putative Rz lysis protein; DvMF_0724; phage(gi56692595)  3e-11  Click
17 874692..874958  hypothetical protein; DvMF_0725  N/A  Click
18 874972..875187  hypothetical protein; DvMF_0726  N/A  Click
19 875189..875695  PHAGE_Pseudo_MP42: hypothetical protein; DvMF_0727; phage(gi399528604)  8e-44  Click
20 875692..877368  PHAGE_Pseudo_DMS3: hypothetical protein DMS3-26; DvMF_0728; phage(gi119953651)  0.0  Click
21 877343..879001  PHAGE_Pseudo_MP42: portal protein; DvMF_0729; phage(gi399528608)  2e-112  Click
22 879276..880529  PHAGE_Escher_D108: virion morphogenesis; DvMF_0730; phage(gi281199673)  2e-68  Click
23 880672..881154  PHAGE_Escher_D108: virion morphogenesis protein; DvMF_0731; phage(gi281199674)  2e-13  Click
24 881296..881886  PHAGE_Entero_mEpX1: hypothetical protein; DvMF_0732; phage(gi428781914)  2e-09  Click
25 881883..882815  hypothetical protein; DvMF_0733  N/A  Click
26 882852..884036  PHAGE_Pseudo_JBD30: hypothetical protein; DvMF_0734; phage(gi448244621)  3e-54  Click
27 884040..884969  PHAGE_Pseudo_JBD88a: hypothetical protein; DvMF_0735; phage(gi448244723)  1e-98  Click
28 884981..885397  PHAGE_Cafete_BV_PW1: hypothetical protein; DvMF_0736; phage(gi310831048)  2e-07  Click
29 885398..885817  PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; DvMF_0737; phage(gi418489087)  2e-14  Click
30 885814..886434  hypothetical protein; DvMF_0738  N/A  Click
31 886436..886639  PHAGE_Haemop_SuMu: hypothetical protein; DvMF_0739; phage(gi418489089)  4e-08  Click
32 886626..888047  PHAGE_Haemop_SuMu: tail sheath protein gpL; DvMF_0740; phage(gi418489090)  5e-108  Click
33 888235..888609  PHAGE_Haemop_SuMu: tail tube protein; DvMF_0741; phage(gi418489063)  4e-23  Click
34 888613..888942  hypothetical protein; DvMF_0742  N/A  Click
35 889104..891044  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; DvMF_0743; phage(gi418489066)  1e-73  Click
36 891065..892405  PHAGE_Haemop_SuMu: DNA circulation protein; DvMF_0744; phage(gi418489067)  1e-13  Click
37 892395..893495  PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; DvMF_0745; phage(gi418489068)  9e-63  Click
38 893653..894279  PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; DvMF_0746; phage(gi418489069)  2e-37  Click
39 complement(894257..895699)  PHAGE_Entero_P2: Fun(Z); DvMF_0747; phage(gi9630348)  2e-12  Click
40 895783..896154  PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; DvMF_0748; phage(gi418489070)  8e-25  Click
41 896164..897225  PHAGE_Haemop_SuMu: baseplate J family protein gp47; DvMF_0749; phage(gi418489071)  5e-74  Click
42 897222..897791  PHAGE_Haemop_SuMu: hypothetical protein; DvMF_0750; phage(gi418489072)  2e-24  Click
43 897835..899127  PHAGE_Salmon_ST64B: tail protein; DvMF_0751; phage(gi23505468)  2e-09  Click
44 899136..899693  hypothetical protein; DvMF_0752  N/A  Click
45 899979..900185  PHAGE_Pseudo_B3: Com translational regulator; DvMF_0753; phage(gi56692616)  1e-07  Click
46 900151..900882  PHAGE_Escher_D108: DNA modification protein Mom; DvMF_0754; phage(gi281199700)  8e-56  Click
47 complement(900925..901131)  PHAGE_Staphy_187: ORF076; DvMF_0755; phage(gi66395272)  3e-10  Click
48 complement(901420..901496)  tRNA  N/A  Click
49 901608..902336  PHAGE_Salmon_ST160: GtrB; DvMF_0756; phage(gi318065903)  1e-21  Click
50 902407..902829  hypothetical protein; DvMF_0757  N/A  Click
51 903125..903877  SNARE associated Golgi protein; DvMF_0758  N/A  Click
52 complement(904072..906045)  PHAGE_Acanth_mimivirus: methionyl-tRNA synthetase; DvMF_0759; phage(gi311978039)  7e-30  Click
Region 2, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2026839..2027723  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp39; DvMF_1645; phage(gi145708113)  4e-27  Click
2 2027973..2028872  PHAGE_Salmon_SPN9CC: hypothetical protein; DvMF_1646; phage(gi389060507)  2e-56  Click
3 complement(2029152..2029499)  PHAGE_Strept_phiSASD1: gp35; DvMF_1648; phage(gi298103500)  1e-14  Click
4 complement(2029510..2029929)  PHAGE_Burkho_KS9: major tail subunit gp10; DvMF_1649; phage(gi255033742)  2e-06  Click
5 complement(2029945..2030313)  PHAGE_Tetras_SI1: hypothetical protein; DvMF_1650; phage(gi472342242)  3e-11  Click
6 complement(2030300..2030698)  hypothetical protein; DvMF_1651  N/A  Click
7 complement(2030698..2031012)  PHAGE_Geobac_E2: putative head-tail adaptor; DvMF_1652; phage(gi148747735)  6e-14  Click
8 complement(2031015..2031599)  PHAGE_Burkho_KS9: hypothetical protein gp6; DvMF_1653; phage(gi255033738)  4e-10  Click
9 complement(2031596..2031775)  hypothetical protein; DvMF_1654  N/A  Click
10 complement(2031821..2033041)  PHAGE_Entero_phiP27: putative major capsid protein; DvMF_1655; phage(gi18249904)  2e-109  Click
11 complement(2033054..2033755)  PHAGE_Entero_phiP27: putative prohead protease; DvMF_1656; phage(gi18249903)  1e-31  Click
12 complement(2033742..2034968)  PHAGE_Entero_phiP27: putative portal protein; DvMF_1657; phage(gi18249902)  3e-64  Click
13 complement(2034968..2036665)  PHAGE_Entero_phiP27: putative terminase; DvMF_1658; phage(gi18249900)  1e-111  Click
14 complement(2036658..2037131)  PHAGE_Entero_mEp235: terminase small subunit; DvMF_1659; phage(gi428781811)  5e-12  Click
15 complement(2037204..2037599)  PHAGE_Burkho_phiE125: putative class I holin; DvMF_1660; phage(gi17975232)  9e-27  Click
16 complement(2038125..2038472)  hypothetical protein; DvMF_1661  N/A  Click
17 complement(2038454..2038684)  hypothetical protein; DvMF_1662  N/A  Click
18 complement(2038656..2039039)  PHAGE_Pseudo_phiCTX: predicted lysis; DvMF_1663; phage(gi17313230)  8e-07  Click
19 complement(2039042..2039449)  PHAGE_Salmon_SSU5: putative endolysin; DvMF_1664; phage(gi410491437)  4e-30  Click
20 complement(2039862..2040881)  PHAGE_Salmon_c341: O-polysaccharide acetyltransferase protein; DvMF_1666; phage(gi255252697)  4e-05  Click
21 complement(2041199..2041420)  hypothetical protein; DvMF_1667  N/A  Click
22 2041542..2041820  plasmid maintenance system killer; DvMF_1668  N/A  Click
23 2041831..2042136  PHAGE_Azospi_Cd: Helix-turn-helix motif; DvMF_1669; phage(gi168495160)  2e-11  Click
24 complement(2042145..2042438)  PHAGE_Burkho_Bcep176: gp8; DvMF_1670; phage(gi77864633)  2e-27  Click