Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 512731..512742  attL    AAATAAAAACAG  N/A  Click
2 complement(513200..515212)  PHAGE_Pseudo_PAJU2: putative acetyl transferase; VS_0492; phage(gi209552443)  1e-70  Click
3 515848..515991  hypothetical protein; VS_0493  N/A  Click
4 516049..516252  PHAGE_Entero_HK022: IS903 transposase; VS_0494; phage(gi9634149)  6e-06  Click
5 complement(516660..516797)  hypothetical protein; VS_0495  N/A  Click
6 516914..517315  ISVisp4 transposase OrfA; VS_0496  N/A  Click
7 517312..518118  PROPHAGE_Escher_CFT073: transposase insF; VS_0497; phage(gi26249410)  3e-40  Click
8 complement(518172..518549)  PHAGE_Cronob_vB_CsaM_GAP161: hypothetical protein; VS_0498; phage(gi414086166)  7e-32  Click
9 518876..519784  PHAGE_Acanth_moumouvirus: apurinic endonuclease IV; VS_0499; phage(gi441432462)  5e-30  Click
10 520448..521122  PHAGE_Equid__9: uracil-DNA glycosylase; VS_0501; phage(gi261835098)  2e-47  Click
11 521215..521766  hypothetical protein; VS_0502  N/A  Click
12 complement(521919..522113)  hypothetical protein; VS_0503  N/A  Click
13 522819..524249  putative sodium/alanine symporter; VS_0504  N/A  Click
14 524528..525304  hypothetical protein; VS_0505  N/A  Click
15 complement(525485..526750)  PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; VS_0506; phage(gi310831360)  4e-46  Click
16 complement(526858..527586)  hypothetical protein; VS_0507  N/A  Click
17 527901..529214  PHAGE_Lactob_KC5a: putative minor tail protein; VS_0508; phage(gi90592623)  7e-05  Click
18 529403..529753  ISVisp4 transposase OrfA; VS_0509  N/A  Click
19 529849..530079  PROPHAGE_Escher_CFT073: transposase insF; VS_0510; phage(gi26249410)  6e-06  Click
20 complement(530148..530669)  flavodoxin FldB; VS_0511  N/A  Click
21 530772..531734  PHAGE_Entero_2: P2 Int-like protein; VS_0512; phage(gi169936064)  2e-09  Click
22 537588..537599  attR    AAATAAAAACAG  N/A  Click
Region 2, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1764920..1764934  attL    CGCTACTGGACTCGA  N/A  Click
2 complement(1777832..1780966)  PHAGE_Bacill_36: RecQ helicase; VS_1648; phage(gi156564053)  5e-12  Click
3 complement(1781113..1782180)  PHAGE_Ranid__2: ORF120; restriction; phage system; VS_1649(gi109638623)  7e-18  Click
4 complement(1782304..1785189)  PHAGE_Bacill_36: PcrA helicase; VS_1650; phage(gi156564011)  9e-13  Click
5 complement(1785343..1786470)  PHAGE_Salmon_7_11: hypothetical protein; VS_1651; phage(gi345461254)  2e-07  Click
6 complement(1786470..1787087)  hypothetical protein; VS_1652  N/A  Click
7 complement(1787202..1787642)  PHAGE_Cronob_vB_CsaM_GAP32: ribonuclease H; VS_1653; phage(gi414087227)  4e-11  Click
8 complement(1787719..1787934)  PHAGE_Entero_P4: transcriptional regulator; putative; phage DNA-binding protein; VS_1654(gi9627517)  5e-09  Click
9 1788053..1788523  putative DNA repair protein; prophage protein; VS_1655  N/A  Click
10 1788520..1788948  hypothetical protein; VS_1656  N/A  Click
11 1788998..1789438  hypothetical protein; VS_1657  N/A  Click
12 1789615..1789866  hypothetical protein; VS_1658  N/A  Click
13 1790015..1790350  hypothetical protein; VS_1659  N/A  Click
14 1790458..1791207  hypothetical protein; VS_1660  N/A  Click
15 1791194..1792540  hypothetical protein; VS_1661  N/A  Click
16 complement(1792584..1793219)  hypothetical protein; VS_1662  N/A  Click
17 1793424..1793630  hypothetical protein; VS_1663  N/A  Click
18 complement(1793502..1793744)  hypothetical protein; VS_1664  N/A  Click
19 complement(1793741..1794019)  hypothetical protein; VS_1665  N/A  Click
20 1794412..1795107  hypothetical protein; VS_1666  N/A  Click
21 1795104..1795367  hypothetical protein; VS_1667  N/A  Click
22 complement(1795406..1795597)  PHAGE_Entero_P4: transcriptional regulator; VS_1668; phage(gi9627517)  3e-09  Click
23 complement(1795776..1797017)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; VS_1669; phage(gi16130540)  4e-108  Click
24 1797211..1797225  attR    CGCTACTGGACTCGA  N/A  Click