Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 51 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 819778..819792 | attL ACGCCGCATCCGGCA | N/A | Click |
2 | complement(821226..822296) | PHAGE_Entero_lambda: integration protein; EC55989_0755; phage(gi9626273) | 0.0 | Click |
3 | 822920..823123 | hypothetical protein; EC55989_0757 | N/A | Click |
4 | 823372..823383 | attL CAAAAAGTTGTT | N/A | Click |
5 | complement(823755..823976) | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip097; EC55989_0758; phage(gi20065892) | 1e-36 | Click |
6 | complement(824075..824386) | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip098; EC55989_0759; phage(gi20065893) | 5e-49 | Click |
7 | complement(824367..824558) | PHAGE_Entero_lambda: hypothetical protein lambdap38; EC55989_0761; phage(gi9626278) | 1e-26 | Click |
8 | complement(824710..825390) | PHAGE_Entero_2008: putative exonuclease; EC55989_0762; phage(gi209427739) | 7e-131 | Click |
9 | complement(825387..826172) | PHAGE_Entero_lambda: bet; EC55989_0763; phage(gi9626281) | 7e-151 | Click |
10 | complement(826178..826474) | PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; EC55989_0764; phage(gi116222045) | 3e-52 | Click |
11 | complement(827354..828109) | PHAGE_Entero_ST104: CI; EC55989_0766; phage(gi46358671) | 5e-94 | Click |
12 | 828148..828378 | PHAGE_Escher_HK639: cro; EC55989_0767; phage(gi356870651) | 2e-19 | Click |
13 | 828448..828987 | PHAGE_Entero_mEp237: CII protein; putative; phage coiled-coil; EC55989_0768(gi435439306) | 3e-64 | Click |
14 | 828984..830003 | PHAGE_Entero_lambda: DNA replication protein; EC55989_0769; phage(gi9626295) | 1e-110 | Click |
15 | 830000..830701 | PHAGE_Entero_lambda: DNA replication protein; EC55989_0770; phage(gi9626296) | 1e-127 | Click |
16 | 830698..831000 | PHAGE_Entero_lambda: ren exclusion protein; EC55989_0771; phage(gi9626297) | 4e-42 | Click |
17 | 831068..831400 | PHAGE_Acinet_Acj61: putative quaternary ammonium compound-resistance protein qacE; EC55989_0772; phage(gi311992758) | 1e-10 | Click |
18 | 831656..833182 | PHAGE_Bacill_WBeta: putative site-specific recombinase; DLP12; phage prophage; EC55989_0773(gi85701406) | 1e-08 | Click |
19 | 833179..833355 | hypothetical protein; EC55989_0774 | N/A | Click |
20 | 833852..834361 | conserved hypothetical protein; putative exported protein; EC55989_0776 | N/A | Click |
21 | 834556..835011 | PHAGE_Cronob_phiES15: hypothetical protein; EC55989_0777; phage(gi401817579) | 9e-62 | Click |
22 | 835011..835181 | PHAGE_Escher_HK639: NinE; EC55989_0778; phage(gi356870663) | 6e-15 | Click |
23 | 835174..835464 | PHAGE_Entero_mEp237: hypothetical protein; DLP12; phage prophage; EC55989_0779(gi435439317) | 3e-48 | Click |
24 | 836045..836428 | PHAGE_Entero_2008: antitermination protein Q; DLP12; phage prophage; EC55989_0781(gi209427762) | 5e-56 | Click |
25 | complement(836617..837699) | outer membrane porin; DLP12 prophage; EC55989_0782 | N/A | Click |
26 | 838288..838503 | PHAGE_Stx2_c_II: holin; DLP12; phage prophage; EC55989_0783(gi302393164) | 1e-28 | Click |
27 | 838503..839000 | PHAGE_Entero_cdtI: lysin; DLP12; phage prophage; EC55989_0784(gi148609440) | 1e-91 | Click |
28 | 838985..839434 | PHAGE_Escher_HK75: Rz; EC55989_0785; phage(gi356870731) | 8e-73 | Click |
29 | 839640..840161 | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; EC55989_0786; phage(gi399498859) | 1e-100 | Click |
30 | complement(840511..840936) | PHAGE_Entero_lambda: putative envelope protein; EC55989_0787; phage(gi19263396) | 5e-56 | Click |
31 | complement(840978..841211) | PHAGE_Entero_2008: hypothetical protein YYZ_gp48; Qin; phage prophage; EC55989_0788(gi209427772) | 2e-20 | Click |
32 | 841600..842145 | PHAGE_Entero_lambda: DNA packaging protein; DLP12; phage prophage; EC55989_0789(gi9626244) | 4e-98 | Click |
33 | 842120..843781 | PHAGE_Entero_lambda: DNA packaging protein; EC55989_0790; phage(gi9626245) | 0.0 | Click |
34 | 844041..844247 | PHAGE_Entero_lambda: head-tail joining protein; EC55989_0792; phage(gi9626246) | 4e-32 | Click |
35 | 844244..845845 | PHAGE_Entero_lambda: capsid component; minor; phage capsid protein [Contains: Protein B*] from bacteriophage origin; EC55989_0793(gi9626247) | 0.0 | Click |
36 | 845691..847145 | PHAGE_Entero_lambda: capsid component; EC55989_0794; phage(gi9626248) | 0.0 | Click |
37 | 847149..847487 | PHAGE_Entero_lambda: head-DNA stabilization protein; EC55989_0795; phage(gi9626250) | 2e-57 | Click |
38 | 847516..848568 | PHAGE_Entero_lambda: capsid component; EC55989_0796; phage(gi9626251) | 0.0 | Click |
39 | 848571..849005 | PHAGE_Entero_lambda: DNA packaging protein; EC55989_0797; phage(gi9626252) | 3e-57 | Click |
40 | 849017..849370 | PHAGE_Entero_lambda: head-tail joining protein; EC55989_0798; phage(gi9626253) | 1e-61 | Click |
41 | 849382..849960 | PHAGE_Entero_lambda: tail component; EC55989_0799; phage(gi9626254) | 2e-101 | Click |
42 | 849957..850352 | PHAGE_Entero_lambda: tail component; EC55989_0800; phage(gi9626255) | 3e-71 | Click |
43 | 850330..851100 | PHAGE_Entero_lambda: tail component; EC55989_0801; phage(gi9626256) | 4e-135 | Click |
44 | 851116..851538 | PHAGE_Entero_lambda: tail component; EC55989_0802; phage(gi9626257) | 2e-63 | Click |
45 | 851520..851954 | PHAGE_Entero_lambda: tail component; EC55989_0803; phage(gi9626258) | 2e-81 | Click |
46 | 851947..854508 | PHAGE_Entero_lambda: tail component; EC55989_0804; phage(gi9626259) | 0.0 | Click |
47 | 854505..854834 | PHAGE_Entero_lambda: tail component; EC55989_0805; phage(gi9626260) | 4e-60 | Click |
48 | 854834..855532 | PHAGE_Entero_lambda: tail component; EC55989_0806; phage(gi9626261) | 7e-134 | Click |
49 | 855538..856281 | PHAGE_Entero_mEp460: tail fiber component; EC55989_0807; phage(gi428782332) | 1e-146 | Click |
50 | 856179..856850 | PHAGE_Entero_lambda: tail component; EC55989_0808; phage(gi9626263) | 3e-121 | Click |
51 | 856911..860408 | PHAGE_Entero_lambda: tail:host specificity protein; EC55989_0809; phage(gi9626264) | 0.0 | Click |
52 | 860479..861078 | PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; EC55989_0810; phage(gi148609401) | 1e-112 | Click |
53 | 861137..864217 | PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; EC55989_0811; phage(gi16129506) | 0.0 | Click |
54 | 866889..866900 | attR CAAAAAGTTGTT | N/A | Click |
55 | 875187..875201 | attR ACGCCGCATCCGGCA | N/A | Click |
Region 2, total : 60 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1093627..1094286) | PHAGE_Camelp_virus: CMLV006; EC55989_1019; phage(gi18640240) | 3e-12 | Click |
2 | 1094491..1094552 | attL TTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCG | N/A | Click |
3 | 1094492..1094704 | hypothetical protein; EC55989_1020 | N/A | Click |
4 | complement(1094694..1095713) | PHAGE_Salmon_ST64B: Integrase protein; EC55989_1021; phage(gi23505472) | 2e-87 | Click |
5 | complement(1095691..1096071) | hypothetical protein; EC55989_1022 | N/A | Click |
6 | complement(1096001..1098493) | PHAGE_Entero_mEp460: putative exonuclease; EC55989_1023; phage(gi428782342) | 2e-57 | Click |
7 | complement(1098589..1098777) | hypothetical protein; EC55989_1024 | N/A | Click |
8 | complement(1098774..1099067) | putative regulator of cell division encoded by prophage; EC55989_1025 | N/A | Click |
9 | complement(1099530..1099748) | conserved hypothetical protein; Qin prophage; EC55989_1026 | N/A | Click |
10 | complement(1099778..1099906) | conserved hypothetical protein; Qin prophage; EC55989_1027 | N/A | Click |
11 | complement(1099908..1100063) | PHAGE_Salico_CGphi29: hypothetical protein; Qin; phage prophage; EC55989_1028(gi472340166) | 2e-09 | Click |
12 | complement(1100271..1100678) | PHAGE_Cronob_phiES15: putative transcriptional repressor DicA; EC55989_1029; phage(gi401817574) | 1e-32 | Click |
13 | 1100755..1100982 | PHAGE_Pectob_ZF40: putative cro anti-repressor; EC55989_1030; phage(gi422936651) | 2e-09 | Click |
14 | 1100966..1101517 | hypothetical protein; EC55989_1031 | N/A | Click |
15 | 1101414..1102529 | PHAGE_Escher_TL_2011b: hypothetical protein; EC55989_1032; phage(gi418487646) | 1e-43 | Click |
16 | 1102318..1102983 | PHAGE_Escher_HK639: replication protein 14; EC55989_1033; phage(gi356870655) | 9e-29 | Click |
17 | 1102999..1103787 | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp38; EC55989_1034; phage(gi116222030) | 1e-05 | Click |
18 | 1103788..1104225 | conserved hypothetical protein from phage origin; EC55989_1035 | N/A | Click |
19 | 1104222..1104710 | PHAGE_Pectob_ZF40: putative methylase; putative; phage methyltransferase; EC55989_1036(gi422936660) | 5e-66 | Click |
20 | 1104703..1104957 | hypothetical protein; EC55989_1037 | N/A | Click |
21 | 1104950..1105261 | PHAGE_Entero_mEp213: hypothetical protein; EC55989_1038; phage(gi428782634) | 2e-21 | Click |
22 | 1105390..1105572 | PHAGE_Entero_phiEF24C: hypothetical protein EFP_gp163; EC55989_1039; phage(gi158079459) | 9e-08 | Click |
23 | 1105565..1105741 | PHAGE_Shigel_AG3: hypothetical protein; EC55989_1040; phage(gi282599330) | 3e-13 | Click |
24 | 1105738..1106253 | PHAGE_Salmon_ST64B: hypothetical protein sb32; putative; phage prophage protein; EC55989_1041(gi23505476) | 7e-11 | Click |
25 | complement(1106485..1106988) | PROPHAGE_Escher_MG1655: IS1 transposase B; EC55989_1042; phage(gi16131317) | 2e-95 | Click |
26 | complement(1106907..1107182) | PHAGE_Entero_P1: InsA; EC55989_1043; phage(gi46401643) | 6e-49 | Click |
27 | 1107961..1108212 | conserved hypothetical protein; Qin prophage; EC55989_1044 | N/A | Click |
28 | 1108559..1109614 | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1045; phage(gi428782365) | 6e-91 | Click |
29 | 1109615..1109995 | PHAGE_Escher_HK75: RusA-like protein; EC55989_1046; phage(gi356870726) | 1e-36 | Click |
30 | 1109992..1110813 | PHAGE_Entero_HK225: late gene regulator Q; EC55989_1047; phage(gi428782441) | 8e-90 | Click |
31 | 1110953..1111237 | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1048; phage(gi428782368) | 3e-08 | Click |
32 | 1111388..1112437 | PHAGE_Entero_mEp460: DNA methylase; EC55989_1049; phage(gi428782369) | 2e-174 | Click |
33 | 1112487..1112562 | tRNA | N/A | Click |
34 | 1112570..1112646 | tRNA | N/A | Click |
35 | 1112660..1112736 | tRNA | N/A | Click |
36 | 1113226..1115088 | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp03; EC55989_1050; phage(gi116221995) | 0.0 | Click |
37 | 1115133..1115453 | PHAGE_Escher_P13374: lysis protein, holin; EC55989_1051; phage(gi410491645) | 8e-44 | Click |
38 | 1115458..1116264 | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1052; phage(gi428782371) | 5e-19 | Click |
39 | complement(1116274..1116588) | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp06; EC55989_1053; phage(gi116221998) | 1e-57 | Click |
40 | 1116717..1117250 | PHAGE_Entero_mEp460: endolysin; Qin; phage prophage; EC55989_1054(gi428782372) | 6e-99 | Click |
41 | 1117328..1117540 | conserved hypothetical protein of prophage; EC55989_1055 | N/A | Click |
42 | 1117521..1117793 | hypothetical protein; EC55989_1056 | N/A | Click |
43 | 1117809..1118360 | PHAGE_Escher_TL_2011c: hypothetical protein; EC55989_1058; phage(gi418487099) | 6e-73 | Click |
44 | 1118813..1119289 | PHAGE_Entero_mEp460: terminase small subunit; EC55989_1059; phage(gi428782317) | 5e-40 | Click |
45 | 1119286..1121409 | PHAGE_Entero_mEp460: terminase large subunit; EC55989_1060; phage(gi428782318) | 0.0 | Click |
46 | 1121382..1121618 | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1061; phage(gi428782319) | 5e-24 | Click |
47 | 1121618..1123120 | PHAGE_Entero_mEp460: portal protein; EC55989_1062; phage(gi428782320) | 0.0 | Click |
48 | 1122918..1125089 | PHAGE_Entero_mEp460: putative protease/scaffold protein; EC55989_1063; phage(gi428782321) | 0.0 | Click |
49 | 1125177..1125503 | PHAGE_Entero_mEp460: hypothetical protein; hypothetical; phage membrane protein from phage origin; EC55989_1064(gi428782322) | 5e-22 | Click |
50 | 1125496..1125777 | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1065; phage(gi428782323) | 6e-22 | Click |
51 | 1125774..1126403 | PROPHAGE_Escher_Sakai: putative minor tail protein; EC55989_1066; phage(gi15832208) | 6e-101 | Click |
52 | 1126416..1126814 | PROPHAGE_Escher_Sakai: putative minor tail protein U; EC55989_1067; phage(gi15832207) | 9e-72 | Click |
53 | 1126822..1127568 | PHAGE_Entero_HK630: major tail protein V; EC55989_1068; phage(gi428782800) | 7e-106 | Click |
54 | 1127587..1128018 | PHAGE_Entero_HK630: minor tail protein G; EC55989_1069; phage(gi428782801) | 1e-45 | Click |
55 | 1128045..1128449 | PHAGE_Entero_HK630: tail assembly protein GT; EC55989_1070; phage(gi428782802) | 3e-52 | Click |
56 | 1128430..1131042 | PHAGE_Entero_HK630: tail length tape measure protein H; EC55989_1071; phage(gi428782803) | 0.0 | Click |
57 | 1131039..1131371 | PHAGE_Entero_HK630: minor tail protein M; EC55989_1072; phage(gi428782804) | 2e-59 | Click |
58 | 1131371..1132069 | PHAGE_Entero_mEp460: minor tail protein; EC55989_1073; phage(gi428782331) | 4e-127 | Click |
59 | 1132032..1132817 | PHAGE_Entero_mEp460: tail fiber component; EC55989_1074; phage(gi428782332) | 4e-143 | Click |
60 | 1132715..1133386 | PHAGE_Entero_HK630: tail component I; EC55989_1075; phage(gi428782807) | 8e-121 | Click |
61 | 1133447..1136842 | PHAGE_Entero_mEp460: host specificity protein; EC55989_1076; phage(gi428782334) | 0.0 | Click |
62 | 1136910..1137509 | PHAGE_Entero_mEp460: Lom protein; EC55989_1077; phage(gi428782335) | 1e-98 | Click |
63 | 1137661..1139064 | PHAGE_Stx2_c_1717: putative tail fiber protein; EC55989_1078; phage(gi209447198) | 0.0 | Click |
64 | 1138986..1139681 | PHAGE_Entero_phiP27: hypothetical protein P27p57; EC55989_1079; phage(gi18249921) | 2e-26 | Click |
65 | 1140290..1140351 | attR TTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCG | N/A | Click |
Region 3, total : 38 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1420655..1420906 | conserved hypothetical protein; Qin prophage; EC55989_1373 | N/A | Click |
2 | 1421253..1422302 | PHAGE_Entero_mEp460: hypothetical protein; Qin; phage prophage; EC55989_1374(gi428782365) | 3e-110 | Click |
3 | 1422308..1422508 | hypothetical protein; EC55989_1375 | N/A | Click |
4 | 1422315..1422674 | PHAGE_Escher_HK75: RusA-like protein; EC55989_1376; phage(gi356870726) | 1e-35 | Click |
5 | 1422665..1423360 | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; EC55989_1377; phage(gi169257244) | 6e-74 | Click |
6 | 1423432..1424271 | PHAGE_Cronob_phiES15: putative protein kinase; EC55989_1378; phage(gi401817584) | 1e-46 | Click |
7 | 1424268..1425011 | PHAGE_Cronob_phiES15: putative serine/threonine phosphatase; EC55989_1379; phage(gi401817585) | 5e-50 | Click |
8 | 1425498..1425573 | tRNA | N/A | Click |
9 | 1425671..1425747 | tRNA | N/A | Click |
10 | 1426724..1428580 | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp03; EC55989_1381; phage(gi116221995) | 0.0 | Click |
11 | 1429321..1429854 | PHAGE_Entero_mEp460: endolysin; Qin; phage prophage; EC55989_1384(gi428782372) | 2e-102 | Click |
12 | 1429836..1430309 | PHAGE_Entero_mEp235: lysis protein Rz; EC55989_1385; phage(gi428781868) | 1e-69 | Click |
13 | 1430726..1431346 | PHAGE_Entero_P4: hypothetical protein P4p03; EC55989_1386; phage(gi9627510) | 3e-13 | Click |
14 | complement(1431288..1432355) | hypothetical protein; EC55989_1387 | N/A | Click |
15 | 1432470..1432622 | hypothetical protein; EC55989_1388 | N/A | Click |
16 | 1432760..1433308 | PHAGE_Entero_HK630: terminase small subunit nu1; EC55989_1389; phage(gi428782788) | 7e-52 | Click |
17 | 1433238..1435208 | PHAGE_Entero_HK630: terminase large subunit A; EC55989_1390; phage(gi428782789) | 0.0 | Click |
18 | 1435192..1435398 | PHAGE_Entero_HK630: head-tail connector W; EC55989_1391; phage(gi428782790) | 1e-11 | Click |
19 | 1435395..1436987 | PHAGE_Entero_HK630: portal protein B; EC55989_1392; phage(gi428782791) | 0.0 | Click |
20 | 1436977..1438482 | PHAGE_Entero_HK630: head maturation protease C; EC55989_1393; phage(gi428782792) | 2e-105 | Click |
21 | 1438519..1438866 | PHAGE_Entero_HK630: head decoration protein D; EC55989_1394; phage(gi428782794) | 1e-24 | Click |
22 | 1438924..1439952 | PHAGE_Entero_HK630: major head subunit E; EC55989_1395; phage(gi428782795) | 3e-115 | Click |
23 | 1439956..1440387 | PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; EC55989_1396; phage(gi169257229) | 6e-12 | Click |
24 | 1440380..1440733 | PHAGE_Entero_HK630: head-tail connector Fii; EC55989_1397; phage(gi428782797) | 2e-43 | Click |
25 | 1440748..1441323 | PHAGE_Entero_HK630: minor tail protein Z; EC55989_1398; phage(gi428782798) | 2e-55 | Click |
26 | 1441320..1441715 | PHAGE_Entero_HK630: minor tail protein U; EC55989_1399; phage(gi428782799) | 5e-58 | Click |
27 | 1441723..1442475 | PHAGE_Entero_HK630: major tail protein V; EC55989_1400; phage(gi428782800) | 6e-112 | Click |
28 | 1442489..1442920 | PHAGE_Entero_HK630: minor tail protein G; EC55989_1401; phage(gi428782801) | 5e-45 | Click |
29 | 1442947..1443360 | PHAGE_Entero_HK630: tail assembly protein GT; EC55989_1402; phage(gi428782802) | 9e-49 | Click |
30 | 1443341..1445914 | PHAGE_Entero_HK630: tail length tape measure protein H; EC55989_1403; phage(gi428782803) | 0.0 | Click |
31 | 1445911..1446240 | PHAGE_Entero_HK630: minor tail protein M; EC55989_1405; phage(gi428782804) | 5e-46 | Click |
32 | 1446240..1446938 | PHAGE_Entero_HK630: minor tail protein L; EC55989_1406; phage(gi428782805) | 1e-107 | Click |
33 | 1446688..1447692 | PHAGE_Entero_4795: putative tail fiber component; EC55989_1407; phage(gi157166055) | 3e-169 | Click |
34 | 1447590..1448270 | PHAGE_Stx2_c_1717: putative tail component; EC55989_1408; phage(gi209447195) | 7e-123 | Click |
35 | 1448613..1452086 | PHAGE_Entero_HK630: tail fiber J; EC55989_1409; phage(gi428782808) | 0.0 | Click |
36 | 1452154..1452753 | PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; EC55989_1410; phage(gi148609401) | 9e-107 | Click |
37 | 1452905..1456075 | PHAGE_Entero_mEp460: side tail fiber protein; EC55989_1411; phage(gi428782336) | 7e-142 | Click |
38 | 1456075..1456659 | PHAGE_Entero_HK630: tail fiber assembly protein; Qin; phage prophage; EC55989_1412(gi428782810) | 4e-103 | Click |
39 | complement(1456714..1457298) | putative AdoMet-dependent methyltransferase; DLP12 prophage; EC55989_1413 | N/A | Click |
40 | 1457439..1457708 | PHAGE_Entero_HK630: tail fiber assembly protein; EC55989_1414; phage(gi428782810) | 8e-22 | Click |
Region 4, total : 51 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1758317..1761280) | PHAGE_Entero_mEp460: side tail fiber protein; EC55989_1691; phage(gi428782336) | 5e-147 | Click |
2 | complement(1761345..1761944) | PHAGE_Entero_mEp460: Lom protein; EC55989_1692; phage(gi428782335) | 7e-107 | Click |
3 | complement(1762014..1765427) | PHAGE_Entero_mEp460: host specificity protein; EC55989_1693; phage(gi428782334) | 0.0 | Click |
4 | 1763267..1763281 | attL CAATCCGCGACGGCG | N/A | Click |
5 | complement(1765488..1766135) | PHAGE_Entero_mEp460: tail assembly protein; EC55989_1694; phage(gi428782333) | 1e-98 | Click |
6 | complement(1766033..1766776) | PHAGE_Entero_mEp460: tail fiber component; EC55989_1695; phage(gi428782332) | 2e-151 | Click |
7 | complement(1766782..1767480) | PHAGE_Entero_mEp460: minor tail protein; EC55989_1696; phage(gi428782331) | 1e-136 | Click |
8 | complement(1767490..1767819) | PHAGE_Entero_mEp460: minor tail protein; EC55989_1697; phage(gi428782330) | 2e-61 | Click |
9 | complement(1767819..1770905) | PHAGE_Entero_mEp460: tail length tape measure protein; EC55989_1698; phage(gi428782329) | 0.0 | Click |
10 | complement(1770847..1771176) | PHAGE_Entero_mEp460: tail assembly protein; EC55989_1699; phage(gi428782328) | 5e-59 | Click |
11 | complement(1771185..1771613) | PHAGE_Entero_mEp460: minor tail protein; EC55989_1700; phage(gi428782327) | 4e-66 | Click |
12 | complement(1771632..1772450) | PHAGE_Entero_mEp460: major tail protein; EC55989_1701; phage(gi428782326) | 6e-138 | Click |
13 | complement(1772386..1772799) | PHAGE_Entero_mEp460: minor tail protein; EC55989_1702; phage(gi428782325) | 9e-76 | Click |
14 | complement(1772784..1773362) | PHAGE_Entero_mEp460: minor tail protein; EC55989_1703; phage(gi428782324) | 2e-104 | Click |
15 | complement(1773374..1773649) | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1704; phage(gi428782323) | 2e-46 | Click |
16 | complement(1773642..1774010) | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1705; phage(gi428782322) | 4e-54 | Click |
17 | complement(1774052..1776271) | PHAGE_Entero_mEp460: putative protease/scaffold protein; EC55989_1706; phage(gi428782321) | 0.0 | Click |
18 | complement(1776024..1777604) | PHAGE_Entero_mEp460: portal protein; EC55989_1707; phage(gi428782320) | 0.0 | Click |
19 | complement(1777532..1777750) | PHAGE_Entero_mEp460: hypothetical protein; EC55989_1708; phage(gi428782319) | 9e-35 | Click |
20 | complement(1777741..1779843) | PHAGE_Entero_mEp460: terminase large subunit; EC55989_1709; phage(gi428782318) | 0.0 | Click |
21 | complement(1779843..1780337) | PHAGE_Entero_mEp460: terminase small subunit; EC55989_1710; phage(gi428782317) | 7e-85 | Click |
22 | complement(1780890..1781096) | PHAGE_Entero_HK630: hypothetical protein; EC55989_1711; phage(gi428782856) | 1e-24 | Click |
23 | 1781384..1781794 | PHAGE_Entero_HK629: putative envelope protein; Qin; phage prophage; EC55989_1712(gi428782079) | 1e-59 | Click |
24 | complement(1782114..1782578) | PHAGE_Entero_HK630: cell lysis protein Rz; DLP12; phage prophage; EC55989_1713(gi428782852) | 1e-66 | Click |
25 | complement(1782580..1782753) | conserved hypothetical protein from phage origin; EC55989_1714 | N/A | Click |
26 | complement(1782877..1783410) | PHAGE_Entero_mEp460: endolysin; Qin; phage prophage; EC55989_1715(gi428782372) | 6e-99 | Click |
27 | complement(1783785..1784000) | PHAGE_Entero_mEp460: porin; DLP12; phage prophage; EC55989_1717(gi428782370) | 2e-34 | Click |
28 | complement(1784252..1784647) | putative tolA protein (fragment) of prophage; EC55989_1718 | N/A | Click |
29 | complement(1784798..1785226) | putative TolA protein (fragment) of prophage; EC55989_1719 | N/A | Click |
30 | complement(1785760..1786113) | hypothetical protein; EC55989_1721 | N/A | Click |
31 | complement(1786224..1786300) | tRNA | N/A | Click |
32 | 1786258..1786422 | hypothetical protein; EC55989_1722 | N/A | Click |
33 | complement(1786401..1786476) | tRNA | N/A | Click |
34 | complement(1786620..1787441) | PHAGE_Entero_HK225: late gene regulator Q; EC55989_1723; phage(gi428782441) | 5e-89 | Click |
35 | complement(1787438..1787815) | PHAGE_Escher_HK75: RusA-like protein; EC55989_1724; phage(gi356870726) | 6e-36 | Click |
36 | complement(1787619..1787819) | hypothetical protein; EC55989_1725 | N/A | Click |
37 | complement(1787825..1788874) | PHAGE_Entero_mEp460: hypothetical protein; Qin; phage prophage; EC55989_1726(gi428782365) | 1e-110 | Click |
38 | complement(1789221..1789472) | conserved hypothetical protein; Qin prophage; EC55989_1727 | N/A | Click |
39 | complement(1790060..1790383) | hypothetical protein; EC55989_1728 | N/A | Click |
40 | complement(1790432..1791469) | hypothetical protein; EC55989_1729 | N/A | Click |
41 | complement(1791685..1792110) | conserved hypothetical protein from phage origin; EC55989_1730 | N/A | Click |
42 | complement(1792151..1793170) | PHAGE_Erwini_PEp14: putative phage O family protein; EC55989_1731; phage(gi374531901) | 7e-38 | Click |
43 | complement(1793097..1793618) | PHAGE_Pectob_ZF40: putative cII repressor; EC55989_1732; phage(gi422936652) | 5e-05 | Click |
44 | complement(1793602..1793832) | PHAGE_Pectob_ZF40: putative cro anti-repressor; EC55989_1733; phage(gi422936651) | 2e-09 | Click |
45 | 1793910..1794317 | PHAGE_Cronob_phiES15: putative transcriptional repressor DicA; EC55989_1734; phage(gi401817574) | 1e-35 | Click |
46 | 1794486..1794641 | PHAGE_Salico_CGphi29: hypothetical protein; Qin; phage prophage; EC55989_1735(gi472340166) | 8e-09 | Click |
47 | 1794601..1795218 | hypothetical protein; EC55989_1736 | N/A | Click |
48 | 1795600..1795893 | putative regulator of cell division encoded by prophage; EC55989_1737 | N/A | Click |
49 | 1795890..1796081 | conserved hypothetical protein; Qin prophage; EC55989_1738 | N/A | Click |
50 | 1796175..1798646 | PHAGE_Entero_mEp460: putative exonuclease; EC55989_1739; phage(gi428782342) | 2e-57 | Click |
51 | 1798719..1798970 | PHAGE_Gifsy_2: bacteriophage excisionase; EC55989_1740; phage(gi169257269) | 2e-17 | Click |
52 | 1798990..1800285 | PHAGE_Entero_2008: putative integrase; Qin; phage prophage; EC55989_1741(gi209427727) | 2e-156 | Click |
53 | complement(1800305..1800415) | hypothetical protein; EC55989_1742 | N/A | Click |
54 | 1801318..1802526 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; EC55989_1744; phage(gi24375070) | 2e-124 | Click |
55 | 1808332..1808346 | attR CAATCCGCGACGGCG | N/A | Click |
Region 5, total : 44 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2142071..2142150 | attL TTTGATTTTATTCTTATCTTTCCCATGGTACCCGGAGCGGGACTTGAACCCGCACAGCGCGAACGCCGAGGGATTTTAAA | N/A | Click |
2 | complement(2142257..2143258) | PHAGE_Haemop_HP2: integrase; EC55989_2086; phage(gi17981816) | 3e-105 | Click |
3 | complement(2143264..2143611) | conserved hypothetical protein; putative exported protein; EC55989_2087 | N/A | Click |
4 | complement(2143641..2144291) | hypothetical protein; EC55989_2088 | N/A | Click |
5 | complement(2144307..2144711) | PHAGE_Burkho_BcepMu: gp17; putative; phage regulator; EC55989_2089(gi48696927) | 2e-25 | Click |
6 | 2144787..2144993 | hypothetical protein; EC55989_2090 | N/A | Click |
7 | 2145010..2145213 | PHAGE_Vibrio_kappa: putative regulator; EC55989_2091; phage(gi165970239) | 6e-10 | Click |
8 | 2145425..2145586 | hypothetical protein; EC55989_2092 | N/A | Click |
9 | 2145537..2145875 | hypothetical protein; EC55989_2093 | N/A | Click |
10 | 2145884..2146129 | hypothetical protein; EC55989_2094 | N/A | Click |
11 | 2146275..2146529 | hypothetical protein; EC55989_2095 | N/A | Click |
12 | 2146469..2146771 | hypothetical protein; EC55989_2096 | N/A | Click |
13 | 2146913..2147278 | hypothetical protein; EC55989_2097 | N/A | Click |
14 | 2147285..2150107 | PHAGE_Yersin_413C: gpA; EC55989_2098; phage(gi30065742) | 4e-80 | Click |
15 | 2150184..2151143 | Plasmid segregation protein parM (Protein stbA) (ParA locus 36 kDa protein); EC55989_2099 | N/A | Click |
16 | 2151148..2151462 | Putative stability/partitioning protein phage encoded (Putative plasmid partition protein) (modular protein); EC55989_2100 | N/A | Click |
17 | 2151482..2151913 | PHAGE_Salmon_ST64B: hypothetical protein sb31; EC55989_2101; phage(gi23505475) | 1e-14 | Click |
18 | 2151894..2152178 | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; EC55989_2102; phage(gi399498823) | 2e-23 | Click |
19 | complement(2152201..2152587) | hypothetical protein; EC55989_2103 | N/A | Click |
20 | complement(2152690..2153736) | PHAGE_Erwini_ENT90: phage portal protein; EC55989_2104; phage(gi431810941) | 2e-91 | Click |
21 | complement(2153736..2155487) | PHAGE_Yersin_413C: gpP; EC55989_2105; phage(gi30065706) | 2e-131 | Click |
22 | 2155609..2156478 | PHAGE_Salmon_RE_2010: capsid scaffolding protein; EC55989_2106; phage(gi418489698) | 3e-45 | Click |
23 | 2156502..2157554 | PHAGE_Yersin_413C: gpN; EC55989_2107; phage(gi30065708) | 1e-71 | Click |
24 | 2157600..2158400 | PHAGE_Ralsto_phiRSA1: terminase; EC55989_2108; phage(gi145708083) | 6e-36 | Click |
25 | 2158432..2158998 | PHAGE_Burkho_2: gp50, phage head completion protein (GPL); EC55989_2109; phage(gi134288689) | 1e-25 | Click |
26 | 2158982..2159524 | PHAGE_Aeromo_phiO18P: putative holin; EC55989_2111; phage(gi148727161) | 9e-10 | Click |
27 | 2158998..2159198 | PHAGE_Yersin_413C: gpX; EC55989_2110; phage(gi30065711) | 6e-10 | Click |
28 | 2159521..2159913 | PHAGE_Entero_phiP27: putative endolysin; EC55989_2112; phage(gi18249894) | 2e-52 | Click |
29 | 2159766..2160317 | hypothetical protein; EC55989_2113 | N/A | Click |
30 | 2160456..2162336 | PHAGE_Entero_2008: hypothetical protein YYZ_gp42; EC55989_2114; phage(gi209427766) | 0.0 | Click |
31 | 2162360..2162827 | PHAGE_Yersin_413C: gpR; EC55989_2115; phage(gi30065716) | 3e-16 | Click |
32 | 2162811..2163455 | PHAGE_Pseudo_phiCTX: predicted tail completion; EC55989_2116; phage(gi17313233) | 3e-19 | Click |
33 | 2163452..2164033 | PHAGE_Yersin_413C: gpV; EC55989_2117; phage(gi30065718) | 5e-42 | Click |
34 | 2164030..2164380 | PHAGE_Yersin_413C: gpW; EC55989_2118; phage(gi30065719) | 1e-21 | Click |
35 | 2164384..2165280 | PHAGE_Yersin_413C: gpJ; EC55989_2119; phage(gi30065720) | 1e-87 | Click |
36 | 2165273..2165881 | PHAGE_Salmon_RE_2010: tail protein I; EC55989_2120; phage(gi418489712) | 9e-63 | Click |
37 | 2167893..2168471 | PHAGE_Entero_HK630: tail fiber assembly protein; Qin; phage prophage; EC55989_2122(gi428782810) | 3e-98 | Click |
38 | complement(2168515..2169120) | putative serine acetlyltransferase from phage; EC55989_2123 | N/A | Click |
39 | complement(2169244..2169738) | PROPHAGE_Salmon_Ty2: putative phage tail protein; EC55989_2124; phage(gi29143763) | 1e-38 | Click |
40 | complement(2169745..2172561) | PHAGE_Yersin_413C: gpT; EC55989_2125; phage(gi30065729) | 3e-108 | Click |
41 | complement(2172539..2172775) | PHAGE_Yersin_413C: gpE+E'; EC55989_2126; phage(gi30065728) | 3e-07 | Click |
42 | complement(2172703..2173077) | PHAGE_Yersin_413C: gpE; EC55989_2127; phage(gi30065727) | 7e-08 | Click |
43 | complement(2173133..2173645) | PROPHAGE_Salmon_Ty2: major tail tube protein; EC55989_2128; phage(gi29143759) | 5e-34 | Click |
44 | complement(2173645..2174829) | PHAGE_Erwini_ENT90: tail sheath protein; EC55989_2129; phage(gi431810939) | 6e-101 | Click |
45 | 2174855..2176096 | PHAGE_Yersin_413C: gpD; EC55989_2130; phage(gi30065731) | 3e-95 | Click |
46 | 2177715..2177794 | attR TTTGATTTTATTCTTATCTTTCCCATGGTACCCGGAGCGGGACTTGAACCCGCACAGCGCGAACGCCGAGGGATTTTAAA | N/A | Click |
Region 6, total : 59 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2665327..2665342 | attL TTGCAGGTTCGATTCC | N/A | Click |
2 | 2665518..2666675 | PHAGE_Entero_HK620: integrase; CPS-53; phage (KpLE1) prophage; EC55989_2593(gi13559824) | 0.0 | Click |
3 | 2666884..2668806 | PHAGE_Salmon_c341: O-polysaccharide acetyltransferase protein; putative; phage membrane protein (predicted 10 transmembrane domains); Acyltransferase activity domain; EC55989_2594(gi255252697) | 5e-65 | Click |
4 | complement(2668877..2670856) | PHAGE_Entero_HK620: tail spike protein; putative; phage head-binding domain; EC55989_2595(gi13559880) | 4e-59 | Click |
5 | 2670908..2671246 | PHAGE_Salmon_ST160: Mnt; EC55989_2596; phage(gi318065963) | 1e-17 | Click |
6 | complement(2671482..2672261) | PHAGE_Entero_P1: Ant2; EC55989_2597; phage(gi46401670) | 2e-22 | Click |
7 | complement(2672299..2673009) | PHAGE_Salmon_SPN3UB: hypothetical protein; EC55989_2598; phage(gi423262398) | 4e-89 | Click |
8 | complement(2672999..2673187) | PHAGE_Salmon_vB_SosS_Oslo: Arc-like DNA binding domain protein; EC55989_2599; phage(gi399528776) | 7e-21 | Click |
9 | 2673284..2673604 | PHAGE_Salmon_SPN3UB: Arc-like DNA binding domain protein; Arc-like; phage DNA binding domain; EC55989_2600(gi423262396) | 1e-16 | Click |
10 | 2673688..2673882 | PHAGE_Salmon_SE1: hypothetical protein SE1_gp65; EC55989_2601; phage(gi219681256) | 4e-31 | Click |
11 | complement(2673896..2674261) | PHAGE_Entero_HK620: hypothetical protein HK620p56; EC55989_2602; phage(gi13559879) | 2e-68 | Click |
12 | complement(2676624..2677967) | PHAGE_Entero_HK620: DNA transfer protein; EC55989_2604; phage(gi13559876) | 2e-114 | Click |
13 | complement(2677978..2678670) | PHAGE_Entero_HK620: DNA transfer protein; EC55989_2605; phage(gi13559875) | 8e-127 | Click |
14 | complement(2678673..2679131) | PHAGE_Entero_HK620: head assembly protein; EC55989_2606; phage(gi13559874) | 2e-86 | Click |
15 | complement(2679128..2679976) | PHAGE_Entero_HK620: DNA stabilization protein; EC55989_2607; phage(gi13559873) | 6e-43 | Click |
16 | complement(2679976..2681394) | PHAGE_Entero_HK620: DNA stabilization protein; EC55989_2608; phage(gi13559872) | 0.0 | Click |
17 | complement(2681403..2681885) | PHAGE_Entero_HK620: DNA stabilization protein; EC55989_2609; phage(gi13559871) | 1e-88 | Click |
18 | complement(2681860..2682045) | PHAGE_Entero_HK620: hypothetical protein HK620p47; EC55989_2610; phage(gi13559870) | 7e-29 | Click |
19 | complement(2682088..2683359) | PHAGE_Entero_HK620: capsid protein; EC55989_2611; phage(gi13559869) | 0.0 | Click |
20 | complement(2683371..2684255) | PHAGE_Entero_HK620: scaffold protein; EC55989_2612; phage(gi13559868) | 3e-166 | Click |
21 | complement(2684269..2686467) | PHAGE_Entero_HK620: portal protein; EC55989_2613; phage(gi13559867) | 0.0 | Click |
22 | complement(2686398..2687810) | PHAGE_Entero_HK620: terminase large subunit; EC55989_2614; phage(gi13559866) | 0.0 | Click |
23 | complement(2687807..2688232) | PHAGE_Entero_HK620: terminase small subunit; EC55989_2615; phage(gi13559865) | 3e-69 | Click |
24 | complement(2688312..2688554) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; EC55989_2616; phage(gi399498861) | 6e-39 | Click |
25 | complement(2688658..2689038) | PHAGE_Entero_Sf6: hypothetical protein Sf6p66; EC55989_2617; phage(gi41057339) | 3e-68 | Click |
26 | complement(2689272..2689751) | PHAGE_Escher_KBNP21: hypothetical protein; EC55989_2618; phage(gi410492019) | 8e-32 | Click |
27 | complement(2689973..2690422) | PHAGE_Entero_Sf6: gene 63 protein; EC55989_2619; phage(gi41057336) | 6e-76 | Click |
28 | complement(2690407..2690904) | PHAGE_Salmon_vB_SemP_Emek: lysin; DLP12; phage prophage; EC55989_2620(gi399498856) | 2e-93 | Click |
29 | complement(2690882..2691085) | PHAGE_Salmon_vB_SosS_Oslo: class II holin; EC55989_2621; phage(gi399528833) | 2e-35 | Click |
30 | 2691570..2691842 | hypothetical protein; EC55989_2624 | N/A | Click |
31 | complement(2691876..2692364) | PHAGE_Stx2_c_1717: antiterminator Q protein; EC55989_2625; phage(gi209447165) | 2e-89 | Click |
32 | complement(2692546..2692908) | PHAGE_Entero_HK620: holiday-junction resolvase; EC55989_2626; phage(gi13559855) | 8e-65 | Click |
33 | complement(2692905..2693195) | PHAGE_Salmon_SPN9CC: hypothetical protein; EC55989_2627; phage(gi389060524) | 1e-52 | Click |
34 | complement(2693195..2693917) | PHAGE_Entero_HK620: DNA-binding protein Roi; EC55989_2628; phage(gi13559853) | 5e-132 | Click |
35 | complement(2693910..2694080) | PHAGE_Entero_HK542: NinF protein; EC55989_2629; phage(gi428783390) | 1e-28 | Click |
36 | complement(2694256..2694666) | PHAGE_Escher_HK75: NinB; EC55989_2630; phage(gi356870721) | 2e-71 | Click |
37 | complement(2694866..2695180) | PHAGE_Entero_mEp235: hypothetical protein; EC55989_2631; phage(gi428781857) | 2e-53 | Click |
38 | complement(2695198..2695404) | PHAGE_Entero_HK633: hypothetical protein; EC55989_2632; phage(gi428782573) | 4e-34 | Click |
39 | complement(2695480..2696931) | PHAGE_Entero_Sakai: similar to P protein of bacteriophage HK022; replicative; phage DNA helicase; EC55989_2633(gi9633423) | 0.0 | Click |
40 | complement(2696906..2697796) | PHAGE_Entero_mEp234: DNA replication protein O; EC55989_2634; phage(gi428782297) | 3e-175 | Click |
41 | complement(2697783..2697944) | PHAGE_Escher_HK75: hypothetical protein; EC55989_2635; phage(gi356870717) | 2e-24 | Click |
42 | complement(2697979..2698344) | PHAGE_Entero_IME10: cII; EC55989_2636; phage(gi422934270) | 5e-62 | Click |
43 | complement(2698366..2698551) | PHAGE_Entero_mEp235: prophage antirepressor; EC55989_2637; phage(gi428781851) | 5e-28 | Click |
44 | 2698632..2699282 | PHAGE_Entero_IME10: repressor protein; EC55989_2638; phage(gi422934295) | 4e-124 | Click |
45 | complement(2699454..2699639) | hypothetical protein; EC55989_2639 | N/A | Click |
46 | 2700362..2700832 | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip113; EC55989_2641; phage(gi20065908) | 2e-91 | Click |
47 | 2700922..2701197 | PHAGE_Entero_mEpX1: putative cIII protein; EC55989_2642; phage(gi428781908) | 3e-48 | Click |
48 | 2701164..2701364 | PHAGE_Escher_HK75: hypothetical protein; EC55989_2643; phage(gi356870710) | 4e-28 | Click |
49 | 2701273..2701443 | PHAGE_Entero_mEp234: hypothetical protein; EC55989_2644; phage(gi428782284) | 2e-26 | Click |
50 | 2701424..2702059 | PHAGE_Entero_HK542: essential recombination function protein; essential; phage recombination function protein Erf; EC55989_2645(gi428783375) | 3e-112 | Click |
51 | 2701969..2702442 | PHAGE_Entero_HK542: hypothetical protein; EC55989_2646; phage(gi428783374) | 1e-67 | Click |
52 | 2702466..2702762 | PHAGE_Entero_HK620: hypothetical protein HK620p10; EC55989_2647; phage(gi13559833) | 2e-52 | Click |
53 | 2703224..2703895 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p48; similarities; phage with EA22 from lambda (modular protein involved in blocking host replication); EC55989_2649(gi89152464) | 1e-85 | Click |
54 | 2704068..2704256 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p50; EC55989_2650; phage(gi89152476) | 5e-25 | Click |
55 | 2704258..2704467 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p52; EC55989_2651; phage(gi89152466) | 7e-34 | Click |
56 | 2704464..2705093 | PHAGE_Entero_HK620: hypothetical protein HK620p05; EC55989_2652; phage(gi13559828) | 2e-57 | Click |
57 | 2705466..2705481 | attR TTGCAGGTTCGATTCC | N/A | Click |
58 | 2705501..2705701 | PHAGE_Entero_HK620: hypothetical protein HK620p03; EC55989_2653; phage(gi13559826) | 3e-34 | Click |
59 | complement(2706231..2707478) | galactoside permease; EC55989_2654 | N/A | Click |
60 | complement(2707550..2708464) | aminoimidazole riboside kinase; EC55989_2655 | N/A | Click |
61 | 2708671..2710113 | PHAGE_Bacill_SP10: levanase; EC55989_2656; phage(gi418489513) | 2e-28 | Click |