Definition Escherichia coli IAI1 chromosome, complete genome.
Accession NC_011741
Length 4,700,560
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 58 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 807223..807236  attL    CTTTTTTATACTAA  N/A  Click
2 complement(807310..808380)  PHAGE_Entero_lambda: integration protein; ECIAI1_0743; phage(gi9626273)  0.0  Click
3 complement(808675..808842)  PHAGE_Entero_mEp213: hypothetical protein; ECIAI1_0745; phage(gi428782617)  5e-17  Click
4 complement(808871..809704)  PROPHAGE_Xantho_33913: IS1477 transposase; ECIAI1_0746; phage(gi77747809)  4e-81  Click
5 complement(809728..809991)  PROPHAGE_Xantho_33913: IS1404 transposase; ECIAI1_0747; phage(gi21232568)  7e-26  Click
6 complement(810227..810379)  PHAGE_Entero_P1: Hot; ECIAI1_0748; phage(gi46401721)  2e-09  Click
7 complement(810357..810641)  hypothetical protein; ECIAI1_0749  N/A  Click
8 complement(810726..811301)  PHAGE_Entero_HK633: hypothetical protein; ECIAI1_0750; phage(gi428782550)  1e-59  Click
9 complement(811312..812109)  PHAGE_Salmon_SPN3UB: hypothetical protein; ECIAI1_0751; phage(gi423262431)  2e-141  Click
10 complement(812069..812476)  PHAGE_Escher_P13374: hypothetical protein; ECIAI1_0752; phage(gi410491609)  7e-70  Click
11 complement(812473..812694)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip097; ECIAI1_0753; phage(gi20065892)  9e-37  Click
12 complement(812793..813074)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip098; ECIAI1_0754; phage(gi20065893)  2e-48  Click
13 complement(813428..814108)  PHAGE_Stx2_c_II: exonuclease; ECIAI1_0756; phage(gi302393128)  2e-131  Click
14 complement(814105..814890)  PHAGE_Entero_lambda: bet; ECIAI1_0757; phage(gi9626281)  7e-151  Click
15 complement(814896..815192)  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; ECIAI1_0758; phage(gi116222045)  2e-51  Click
16 complement(815269..815679)  PHAGE_Entero_HK225: Kil protein; ECIAI1_0759; phage(gi428782413)  7e-30  Click
17 complement(815954..816466)  hypothetical protein; ECIAI1_0760  N/A  Click
18 complement(816463..817602)  putative peptidase m, neutral zinc metallopeptidases, zinc-binding site; protein; ECIAI1_0761  N/A  Click
19 complement(817732..818460)  PHAGE_Entero_ST104: CI; ECIAI1_0762; phage(gi46358671)  1e-110  Click
20 818529..818762  PHAGE_Salmon_ST160: Cro; ECIAI1_0763; phage(gi318065926)  9e-24  Click
21 818787..819332  PHAGE_Entero_mEp237: CII protein; ECIAI1_0764; phage(gi435439306)  4e-64  Click
22 819329..820348  PHAGE_Entero_lambda: DNA replication protein; ECIAI1_0765; phage(gi9626295)  4e-112  Click
23 820345..821046  PHAGE_Entero_lambda: DNA replication protein; ECIAI1_0766; phage(gi9626296)  9e-129  Click
24 821625..822377  hypothetical protein; ECIAI1_0767  N/A  Click
25 822389..822463  putative inner membrane protein (fragment); ECIAI1_0768  N/A  Click
26 822634..823116  hypothetical protein; ECIAI1_0769  N/A  Click
27 823306..823761  PHAGE_Cronob_phiES15: hypothetical protein; ECIAI1_0770; phage(gi401817579)  1e-60  Click
28 823761..823931  PHAGE_Escher_HK639: NinE; ECIAI1_0771; phage(gi356870663)  5e-14  Click
29 823924..824214  PHAGE_Entero_mEp237: hypothetical protein; ECIAI1_0772; phage(gi435439317)  6e-49  Click
30 824211..824573  PHAGE_Entero_mEp237: Holliday junction resolvase RusA; ECIAI1_0773; phage(gi435439318)  3e-60  Click
31 824796..825179  PHAGE_Entero_2008: antitermination protein Q; DLP12; phage prophage; ECIAI1_0774(gi209427762)  5e-56  Click
32 complement(825369..826466)  outer membrane porin; DLP12 prophage; ECIAI1_0775  N/A  Click
33 827055..827270  PHAGE_Stx2_c_II: holin; DLP12; phage prophage; ECIAI1_0776(gi302393164)  1e-28  Click
34 827270..827767  PHAGE_Entero_cdtI: lysin; DLP12; phage prophage; ECIAI1_0777(gi148609440)  2e-91  Click
35 827764..828225  PHAGE_Entero_lambda: cell lysis protein; DLP12; phage prophage; ECIAI1_0778(gi9626310)  2e-81  Click
36 complement(828257..828598)  PHAGE_Entero_lambda: Bor protein precursor; DLP12; phage prophage; ECIAI1_0779(gi19263395)  4e-46  Click
37 829496..830041  PHAGE_Entero_lambda: DNA packaging protein; DLP12; phage prophage; ECIAI1_0781(gi9626244)  2e-97  Click
38 830016..831941  PHAGE_Entero_lambda: DNA packaging protein; ECIAI1_0782; phage(gi9626245)  0.0  Click
39 831938..832144  PHAGE_Entero_lambda: head-tail joining protein; ECIAI1_0783; phage(gi9626246)  4e-32  Click
40 832141..833742  PHAGE_Entero_lambda: capsid component; minor; phage capsid protein; ECIAI1_0784(gi9626247)  0.0  Click
41 833723..835042  PHAGE_Entero_lambda: capsid component; ECIAI1_0785; phage(gi9626248)  0.0  Click
42 835046..835384  PHAGE_Entero_lambda: head-DNA stabilization protein; ECIAI1_0786; phage(gi9626250)  2e-56  Click
43 835413..836465  PHAGE_Entero_lambda: capsid component; ECIAI1_0787; phage(gi9626251)  0.0  Click
44 836468..836902  PHAGE_Entero_lambda: DNA packaging protein; ECIAI1_0788; phage(gi9626252)  3e-55  Click
45 836914..837267  PHAGE_Entero_lambda: head-tail joining protein; ECIAI1_0789; phage(gi9626253)  1e-61  Click
46 837279..837857  PHAGE_Entero_lambda: tail component; ECIAI1_0790; phage(gi9626254)  2e-100  Click
47 837854..838249  PHAGE_Entero_lambda: tail component; ECIAI1_0791; phage(gi9626255)  3e-71  Click
48 838227..838997  PHAGE_Entero_lambda: tail component; ECIAI1_0792; phage(gi9626256)  4e-136  Click
49 839013..839435  PHAGE_Entero_lambda: tail component; ECIAI1_0793; phage(gi9626257)  9e-73  Click
50 839417..839851  PHAGE_Entero_lambda: tail component; ECIAI1_0794; phage(gi9626258)  2e-81  Click
51 839844..842423  PHAGE_Entero_lambda: tail component; ECIAI1_0795; phage(gi9626259)  0.0  Click
52 842341..842499  hypothetical protein; ECIAI1_0796  N/A  Click
53 842420..842749  PHAGE_Entero_lambda: tail component; ECIAI1_0797; phage(gi9626260)  4e-60  Click
54 842749..843447  PHAGE_Entero_lambda: tail component; ECIAI1_0798; phage(gi9626261)  4e-136  Click
55 843453..844196  PHAGE_Entero_mEp460: tail fiber component; ECIAI1_0799; phage(gi428782332)  3e-147  Click
56 844094..844765  PHAGE_Entero_lambda: tail component; ECIAI1_0800; phage(gi9626263)  1e-121  Click
57 844826..848305  PHAGE_Entero_lambda: tail:host specificity protein; ECIAI1_0801; phage(gi9626264)  0.0  Click
58 848374..848973  PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; ECIAI1_0802; phage(gi148609401)  4e-107  Click
59 849032..852793  PHAGE_Entero_lambda: Tail fiber protein; ECIAI1_0803; phage(gi9626266)  3e-133  Click
60 856221..856234  attR    CTTTTTTATACTAA  N/A  Click
Region 2, total : 45 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1641670..1641682  attL    ATATGTTTGAAAA  N/A  Click
2 1646195..1646398  PHAGE_Salmon_SSU5: putative selenium-binding protein YdfZ; ECIAI1_1560; phage(gi410491512)  1e-13  Click
3 complement(1646434..1647894)  PHAGE_Microm_MpV1: hypothetical protein; ECIAI1_1561; phage(gi313768442)  2e-41  Click
4 complement(1647983..1649266)  PHAGE_Burkho_phi1026b: gp59; ECIAI1_1562; phage(gi38707949)  1e-33  Click
5 1650019..1650285  hypothetical protein; ECIAI1_1563  N/A  Click
6 1650602..1651192  PHAGE_Escher_D108: G region invertase; DNA; phage invertase; Rac prophage; ECIAI1_1564(gi281199698)  4e-25  Click
7 complement(1651290..1651865)  PHAGE_Entero_HK629: tail fiber assembly protein; Qin; phage prophage; ECIAI1_1565(gi428782036)  3e-104  Click
8 complement(1651865..1654831)  PHAGE_Entero_mEp460: side tail fiber protein; ECIAI1_1566; phage(gi428782336)  3e-152  Click
9 1653324..1654328  PHAGE_Entero_lambda: hypothetical protein lambdap90; ECIAI1_1567; phage(gi9626267)  2e-55  Click
10 1654716..1654889  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF74; ECIAI1_1568; phage(gi157166059)  2e-29  Click
11 complement(1654890..1655489)  PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; ECIAI1_1569; phage(gi148609401)  1e-112  Click
12 complement(1655560..1659057)  PHAGE_Entero_HK629: tail fiber; ECIAI1_1570; phage(gi428782032)  0.0  Click
13 complement(1659118..1659789)  PHAGE_Entero_HK629: tail component protein; ECIAI1_1571; phage(gi428782031)  1e-121  Click
14 complement(1659687..1660430)  PHAGE_Entero_mEp460: tail fiber component; ECIAI1_1572; phage(gi428782332)  3e-147  Click
15 complement(1661135..1661464)  PHAGE_Entero_HK629: minor tail protein; ECIAI1_1574; phage(gi428782028)  1e-56  Click
16 complement(1661461..1664040)  PHAGE_Entero_HK629: tail length tape measure protein; ECIAI1_1575; phage(gi428782027)  0.0  Click
17 complement(1664033..1664467)  PHAGE_Entero_HK629: tail assembly protein; ECIAI1_1576; phage(gi428782026)  2e-81  Click
18 complement(1664449..1664871)  PHAGE_Entero_HK629: minor tail protein; ECIAI1_1577; phage(gi428782025)  9e-73  Click
19 complement(1664887..1665657)  PHAGE_Entero_HK629: major tail protein; ECIAI1_1578; phage(gi428782024)  5e-142  Click
20 complement(1665635..1666030)  PHAGE_Entero_HK629: minor tail protein; ECIAI1_1579; phage(gi428782023)  3e-71  Click
21 complement(1666027..1666605)  PHAGE_Entero_HK629: minor tail protein; ECIAI1_1580; phage(gi428782022)  2e-100  Click
22 complement(1666617..1666970)  PHAGE_Entero_HK629: head-tail connector Fii; ECIAI1_1581; phage(gi428782021)  1e-61  Click
23 complement(1666982..1667416)  PHAGE_Entero_HK629: DNA packaging protein Fi; ECIAI1_1582; phage(gi428782020)  3e-55  Click
24 complement(1667419..1668471)  PHAGE_Entero_HK629: major head subunit; ECIAI1_1583; phage(gi428782019)  0.0  Click
25 complement(1668500..1668838)  PHAGE_Entero_HK629: head decoration protein; ECIAI1_1584; phage(gi428782018)  2e-56  Click
26 complement(1668842..1670296)  PHAGE_Entero_HK629: head maturation protease; ECIAI1_1585; phage(gi428782016)  0.0  Click
27 complement(1670142..1671743)  PHAGE_Entero_HK629: portal protein; minor; phage capsid protein; ECIAI1_1586(gi428782015)  0.0  Click
28 complement(1671740..1671946)  PHAGE_Entero_HK629: head-tail connector; ECIAI1_1587; phage(gi428782014)  4e-32  Click
29 complement(1671943..1673868)  PHAGE_Entero_HK629: terminase large subunit A; ECIAI1_1588; phage(gi428782013)  0.0  Click
30 complement(1673843..1674388)  PHAGE_Entero_HK629: terminase small subunit nu1; DLP12; phage prophage; ECIAI1_1589(gi428782012)  4e-97  Click
31 complement(1674528..1674671)  hypothetical protein; ECIAI1_1590  N/A  Click
32 1674777..1675010  PHAGE_Entero_2008: hypothetical protein YYZ_gp48; ECIAI1_1591; phage(gi209427772)  7e-21  Click
33 1675068..1675478  PHAGE_Entero_HK629: putative envelope protein; ECIAI1_1592; phage(gi428782079)  2e-60  Click
34 complement(1675630..1675803)  hypothetical protein; ECIAI1_1593  N/A  Click
35 complement(1675975..1676247)  hypothetical protein; ECIAI1_1594  N/A  Click
36 complement(1676477..1676689)  PHAGE_Lactoc_bIL312: Csp; Qin; phage prophage; ECIAI1_1595(gi13095918)  1e-15  Click
37 complement(1677053..1677550)  PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; ECIAI1_1596; phage(gi16765210)  2e-53  Click
38 complement(1677547..1678080)  PHAGE_Entero_mEp460: endolysin; Qin; phage prophage; ECIAI1_1597(gi428782372)  2e-97  Click
39 complement(1678077..1678388)  PHAGE_Entero_mEp460: hypothetical protein; ECIAI1_1598; phage(gi428782371)  1e-29  Click
40 complement(1678393..1678608)  PHAGE_Stx2_c_II: holin; Qin; phage prophage; ECIAI1_1599(gi302393164)  1e-27  Click
41 1678639..1678651  attR    ATATGTTTGAAAA  N/A  Click
42 complement(1679362..1679577)  PHAGE_Lactoc_bIL312: Csp; Qin; phage prophage; ECIAI1_1600(gi13095918)  5e-16  Click
43 1679878..1680090  cold shock protein; Qin prophage; ECIAI1_1601  N/A  Click
44 complement(1680512..1681264)  PHAGE_Entero_SfV: antitermination protein Q; Qin; phage prophage; ECIAI1_1602(gi19549033)  1e-137  Click
45 complement(1681278..1682327)  PHAGE_Entero_mEp460: hypothetical protein; ECIAI1_1603; phage(gi428782365)  1e-113  Click
46 complement(1682674..1682925)  hypothetical protein; ECIAI1_1604  N/A  Click
47 complement(1683369..1683656)  toxin of the RelE-RelB toxin-antitoxin system; Qin prophage; ECIAI1_1605  N/A  Click
Region 3, total : 50 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2725054..2726121  PHAGE_Acidia_virus: hypothetical protein ATV_gp34; ECIAI1_2620; phage(gi75750403)  1e-08  Click
2 complement(2726377..2726817)  PHAGE_Bacter_2: tail fiber; ECIAI1_2621; phage(gi212499733)  5e-06  Click
3 complement(2726793..2727878)  PHAGE_Klebsi_JD001: putative tail-fiber protein; ECIAI1_2622; phage(gi448245166)  3e-66  Click
4 complement(2726843..2727016)  hypothetical protein; ECIAI1_2623  N/A  Click
5 complement(2727860..2728540)  PHAGE_Aggreg_S1249: hypothetical protein; ECIAI1_2624; phage(gi273809547)  1e-11  Click
6 complement(2728537..2729736)  PHAGE_Vibrio_vB_VchM_138: putative baseplate protein; ECIAI1_2625; phage(gi422936600)  4e-44  Click
7 complement(2729736..2730089)  PHAGE_Vibrio_vB_VchM_138: hypothetical protein; ECIAI1_2626; phage(gi422936599)  8e-15  Click
8 complement(2730089..2730841)  PHAGE_Haemop_Aaphi23: putative baseplate protein; ECIAI1_2627; phage(gi31544048)  3e-27  Click
9 complement(2730903..2731082)  hypothetical protein; ECIAI1_2628  N/A  Click
10 complement(2731616..2731969)  hypothetical protein; ECIAI1_2629  N/A  Click
11 complement(2731969..2733036)  PHAGE_Psychr_pOW20_A: hypothetical protein; ECIAI1_2630; phage(gi472339843)  6e-17  Click
12 complement(2733039..2733341)  hypothetical protein; ECIAI1_2631  N/A  Click
13 complement(2733341..2733928)  PHAGE_Psychr_pOW20_A: hypothetical protein; ECIAI1_2632; phage(gi472339841)  2e-09  Click
14 complement(2733928..2735934)  PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber/lysozyme protein; ECIAI1_2633; phage(gi422937553)  4e-25  Click
15 complement(2736090..2736542)  hypothetical protein; ECIAI1_2634  N/A  Click
16 complement(2736546..2736986)  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; ECIAI1_2635; phage(gi431809991)  8e-07  Click
17 complement(2736997..2738142)  PHAGE_Aggreg_S1249: hypothetical protein; ECIAI1_2636; phage(gi273809558)  5e-43  Click
18 complement(2738146..2738712)  hypothetical protein; ECIAI1_2637  N/A  Click
19 complement(2738684..2739073)  hypothetical protein; ECIAI1_2638  N/A  Click
20 complement(2739060..2739614)  PHAGE_Psychr_pOW20_A: hypothetical protein; ECIAI1_2639; phage(gi472339833)  2e-12  Click
21 complement(2739611..2740018)  PHAGE_Pseudo_KPP12: putative structural protein; ECIAI1_2640; phage(gi431811107)  2e-09  Click
22 complement(2739984..2740205)  hypothetical protein; ECIAI1_2641  N/A  Click
23 complement(2740247..2741188)  PHAGE_Vibrio_CP_T1: putative major capsid protein; ECIAI1_2642; phage(gi418489228)  9e-16  Click
24 complement(2741200..2741706)  hypothetical protein; ECIAI1_2643  N/A  Click
25 complement(2741710..2742930)  PHAGE_Pectob_ZF40: putative head protein; ECIAI1_2644; phage(gi422936684)  1e-18  Click
26 complement(2742945..2743718)  PHAGE_Haemop_Aaphi23: putative minor head protein; ECIAI1_2645; phage(gi31544030)  2e-16  Click
27 complement(2743567..2745036)  PHAGE_Vibrio_CP_T1: putative portal protein; ECIAI1_2646; phage(gi418489212)  6e-42  Click
28 complement(2745036..2746658)  PHAGE_Bacter_2: terminase; ECIAI1_2647; phage(gi212499721)  2e-29  Click
29 complement(2746661..2747233)  PHAGE_Pseudo_phi297: terminase small subunit; ECIAI1_2648; phage(gi374531284)  1e-48  Click
30 complement(2747295..2747819)  PHAGE_Entero_HK225: lysis protein Rz; ECIAI1_2649; phage(gi428782445)  3e-44  Click
31 complement(2747803..2748279)  PHAGE_Entero_SfV: lysin; ECIAI1_2650; phage(gi19549037)  7e-87  Click
32 complement(2748283..2748642)  PHAGE_Entero_SfV: holin; ECIAI1_2651; phage(gi19549036)  1e-55  Click
33 complement(2749028..2749462)  PHAGE_Bacter_2: Q protein; ECIAI1_2652; phage(gi212499710)  5e-43  Click
34 complement(2749649..2749846)  hypothetical protein; ECIAI1_2653  N/A  Click
35 complement(2749749..2751935)  PHAGE_Bacter_2: predicted P-loop ATPase; ECIAI1_2654; phage(gi212499708)  1e-172  Click
36 complement(2751939..2752139)  PHAGE_Bacter_2: cro; ECIAI1_2655; phage(gi212499707)  2e-09  Click
37 2752281..2752955  PHAGE_Bacter_2: cI; ECIAI1_2656; phage(gi212499706)  2e-59  Click
38 complement(2753013..2753237)  hypothetical protein; ECIAI1_2657  N/A  Click
39 complement(2753374..2753898)  PHAGE_Entero_HK446: hypothetical protein; ECIAI1_2658; phage(gi428782230)  6e-39  Click
40 2754091..2754261  hypothetical protein; ECIAI1_2659  N/A  Click
41 2754258..2755160  PHAGE_Bacter_2: hypothetical protein APSE242; ECIAI1_2660; phage(gi212499746)  4e-09  Click
42 2755163..2756464  PHAGE_Bacter_2: hypothetical protein APSE241; ECIAI1_2661; phage(gi212499745)  1e-135  Click
43 2756480..2757028  PHAGE_Bacter_2: hypothetical protein APSE240; ECIAI1_2662; phage(gi212499744)  2e-49  Click
44 complement(2757081..2757710)  hypothetical protein; ECIAI1_2663  N/A  Click
45 2757757..2759820  PHAGE_Bordet_1: Bbp42; ECIAI1_2664; phage(gi41179402)  0.0  Click
46 2759885..2760646  hypothetical protein; ECIAI1_2665  N/A  Click
47 2760881..2761075  PHAGE_Pseudo_PB1: hypothetical protein PB1_gp87; ECIAI1_2666; phage(gi219523955)  8e-07  Click
48 2761075..2761362  PHAGE_Bacter_2: hypothetical protein APSE235; ECIAI1_2667; phage(gi212499740)  1e-28  Click
49 complement(2761375..2762172)  hypothetical protein; ECIAI1_2668  N/A  Click
50 2762240..2763634  PHAGE_Bacter_2: DEAD box helicase; ECIAI1_2669; phage(gi212499736)  0.0  Click