| Definition | Oligotropha carboxidovorans OM5, complete genome. |
|---|---|
| Accession | NC_011386 |
| Length | 3,745,629 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 10 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 948645..948656 | attL GCTGGCGGCTCG | N/A | Click |
| 2 | complement(948786..949883) | PROPHAGE_Escher_CFT073: transposase; OCAR_4974; phage(gi26248360) | 3e-17 | Click |
| 3 | 949794..950267 | PROPHAGE_Xantho_33913: IS1477 transposase; OCAR_4975; phage(gi77747809) | 2e-18 | Click |
| 4 | complement(951084..951653) | hypothetical protein; OCAR_4976 | N/A | Click |
| 5 | 951703..952128 | Na-Ca exchanger/integrin-beta4; OCAR_4977 | N/A | Click |
| 6 | 952337..952684 | PROPHAGE_Salmon_LT2: transposase; OCAR_4978; phage(gi16766077) | 1e-05 | Click |
| 7 | 952707..953687 | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; OCAR_4979; phage(gi24373866) | 4e-13 | Click |
| 8 | complement(953994..954182) | PHAGE_Azospi_Cd: integrase; OCAR_4980; phage(gi168495175) | 9e-06 | Click |
| 9 | complement(954488..954976) | hypothetical protein; OCAR_4981 | N/A | Click |
| 10 | 954991..955137 | hypothetical protein; OCAR_4982 | N/A | Click |
| 11 | 955322..955660 | PHAGE_Pseudo_MP42: hypothetical protein; OCAR_4984; phage(gi399528614) | 9e-21 | Click |
| 12 | 957326..957337 | attR GCTGGCGGCTCG | N/A | Click |
Region 2, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1486390..1486405 | attL GCCTGTCTGCGCGGCT | N/A | Click |
| 2 | complement(1494964..1496178) | PHAGE_Burkho_phiE125: putative site-specific integrase; OCAR_5530; phage(gi17975195) | 2e-06 | Click |
| 3 | complement(1496447..1496647) | hypothetical protein; OCAR_5531 | N/A | Click |
| 4 | complement(1496739..1496936) | hypothetical protein; OCAR_5532 | N/A | Click |
| 5 | complement(1496933..1497349) | PHAGE_Vibrio_KVP40: conserved hypothetical protein; OCAR_5533; phage(gi34419388) | 3e-12 | Click |
| 6 | complement(1497346..1497645) | PHAGE_Mycoba_Brujita: gp60; OCAR_5534; phage(gi206599604) | 3e-17 | Click |
| 7 | complement(1497645..1498205) | hypothetical protein; OCAR_5535 | N/A | Click |
| 8 | 1498156..1498314 | hypothetical protein; OCAR_5536 | N/A | Click |
| 9 | complement(1498328..1499251) | PHAGE_Burkho_phiE125: hypothetical protein phiE125p37; OCAR_5537; phage(gi17975198) | 5e-86 | Click |
| 10 | complement(1499251..1499484) | PHAGE_Cronob_vB_CsaM_GAP31: baseplate wedge protein gp25; OCAR_5538; phage(gi414086904) | 1e-05 | Click |
| 11 | complement(1499676..1500161) | PHAGE_Entero_IME10: single-stranded DNA-binding protein SSB-P1; OCAR_5539; phage(gi422934292) | 5e-37 | Click |
| 12 | complement(1500163..1500930) | PHAGE_Salmon_SSU5: putative ribonuclease H; OCAR_5540; phage(gi410491500) | 8e-36 | Click |
| 13 | complement(1500934..1502319) | PHAGE_Burkho_BcepMigl: RecT-like protein; OCAR_5541; phage(gi431809863) | 2e-33 | Click |
| 14 | complement(1502346..1503080) | PHAGE_Tetras_TJE1: hypothetical protein; OCAR_5542; phage(gi431810886) | 9e-07 | Click |
| 15 | complement(1503151..1504086) | PHAGE_Burkho_DC1: nuclease; OCAR_5543; phage(gi401723085) | 1e-15 | Click |
| 16 | complement(1504083..1504370) | hypothetical protein; OCAR_5544 | N/A | Click |
| 17 | complement(1504444..1504737) | hypothetical protein; OCAR_5545 | N/A | Click |
| 18 | complement(1504930..1505292) | hypothetical protein; OCAR_5546 | N/A | Click |
| 19 | complement(1505292..1505507) | hypothetical protein; OCAR_5547 | N/A | Click |
| 20 | 1505459..1505893 | hypothetical protein; OCAR_5548 | N/A | Click |
| 21 | complement(1506123..1506596) | hypothetical protein; OCAR_5549 | N/A | Click |
| 22 | complement(1506560..1506787) | putative phage repressor; OCAR_5550 | N/A | Click |
| 23 | 1510019..1510034 | attR GCCTGTCTGCGCGGCT | N/A | Click |
Region 3, total : 24 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2090704..2090715 | attL GACGAGGGACTT | N/A | Click |
| 2 | complement(2094879..2096096) | PROPHAGE_Mesorh_MAFF303099: phage integrase; OCAR_6151; phage(gi13473443) | 2e-103 | Click |
| 3 | complement(2096365..2096610) | hypothetical protein; OCAR_6152 | N/A | Click |
| 4 | 2096676..2096870 | hypothetical protein; OCAR_6153 | N/A | Click |
| 5 | 2097083..2097361 | hypothetical protein; OCAR_6154 | N/A | Click |
| 6 | 2097601..2099073 | hypothetical protein; OCAR_6155 | N/A | Click |
| 7 | 2099118..2099972 | hypothetical protein; OCAR_6156 | N/A | Click |
| 8 | complement(2099985..2100323) | hypothetical protein; OCAR_6157 | N/A | Click |
| 9 | complement(2100591..2102195) | PHAGE_Entero_phiP27: putative terminase; OCAR_6158; phage(gi18249900) | 5e-43 | Click |
| 10 | complement(2102195..2102530) | PHAGE_Marino_P12026: phage head-tail adaptor; OCAR_6159; phage(gi399528325) | 2e-05 | Click |
| 11 | complement(2102530..2102853) | PHAGE_Entero_phiP27: hypothetical protein P27p35; OCAR_6160; phage(gi18249899) | 9e-08 | Click |
| 12 | complement(2102934..2103233) | hypothetical protein; OCAR_6161 | N/A | Click |
| 13 | complement(2103512..2103643) | hypothetical protein; OCAR_6162 | N/A | Click |
| 14 | complement(2103773..2103904) | hypothetical protein; OCAR_6163 | N/A | Click |
| 15 | complement(2103999..2104385) | PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; OCAR_6164; phage(gi168495137) | 6e-10 | Click |
| 16 | complement(2104443..2105591) | PHAGE_Entero_phiP27: putative major capsid protein; OCAR_6165; phage(gi18249904) | 6e-46 | Click |
| 17 | complement(2105599..2106132) | PHAGE_Entero_phiP27: putative prohead protease; OCAR_6166; phage(gi18249903) | 2e-28 | Click |
| 18 | complement(2106129..2107349) | PHAGE_Burkho_phiE125: putative portal protein; OCAR_6167; phage(gi17975165) | 8e-42 | Click |
| 19 | complement(2107349..2107573) | hypothetical protein; OCAR_6168 | N/A | Click |
| 20 | complement(2107592..2108464) | hypothetical protein; OCAR_6169 | N/A | Click |
| 21 | complement(2108702..2109370) | hypothetical protein; OCAR_6170 | N/A | Click |
| 22 | complement(2109603..2111375) | hypothetical protein; OCAR_6171 | N/A | Click |
| 23 | complement(2111356..2111580) | hypothetical protein; OCAR_6172 | N/A | Click |
| 24 | complement(2111670..2111873) | hypothetical protein; OCAR_6173 | N/A | Click |
| 25 | complement(2112258..2113430) | PROPHAGE_Mesorh_MAFF303099: phage integrase; OCAR_6174; phage(gi13473443) | 6e-89 | Click |
| 26 | 2118556..2118567 | attR GACGAGGGACTT | N/A | Click |
Region 4, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2528853..2529383) | PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; OCAR_6584; phage(gi169257239) | 7e-20 | Click |
| 2 | 2529440..2530159 | PHAGE_Acanth_mimivirus: putative WbbJ Acetyltransferase; OCAR_6585; phage(gi311977514) | 2e-09 | Click |
| 3 | complement(2530200..2531669) | PHAGE_Tetras_SI1: hypothetical protein; OCAR_6586; phage(gi472342232) | 5e-11 | Click |
| 4 | complement(2531676..2535545) | PHAGE_Tetras_SI1: hypothetical protein; OCAR_6587; phage(gi472342233) | 7e-41 | Click |
| 5 | complement(2535545..2535988) | PHAGE_Roseob_1: phage cell wall peptidase; OCAR_6588; phage(gi331028137) | 2e-31 | Click |
| 6 | complement(2535997..2536887) | PHAGE_Tetras_SI1: hypothetical protein; OCAR_6589; phage(gi472342235) | 7e-28 | Click |
| 7 | complement(2536884..2537525) | PHAGE_Roseob_1: putative glycoside hydrolase; OCAR_6590; phage(gi331028135) | 2e-35 | Click |
| 8 | complement(2537642..2538232) | PHAGE_Entero_2009a: putative bacteriophage tail tape measure protein; OCAR_6591; phage(gi225220098) | 4e-17 | Click |
| 9 | complement(2538229..2538432) | hypothetical protein; OCAR_6592 | N/A | Click |
| 10 | complement(2538429..2538773) | gene transfer agent; OCAR_6593 | N/A | Click |
| 11 | complement(2538783..2539190) | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; OCAR_6594; phage(gi461474972) | 9e-24 | Click |
| 12 | complement(2539224..2539634) | PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; OCAR_6595; phage(gi461474971) | 5e-15 | Click |
| 13 | complement(2539668..2539988) | PHAGE_Burkho_2: gp9, phage head-tail adaptor, putative; OCAR_6596; phage(gi134288641) | 5e-06 | Click |
| 14 | complement(2539985..2540554) | PHAGE_Rhodob_RcapNL: hypothetical protein; OCAR_6597; phage(gi461474967) | 2e-14 | Click |
| 15 | 2540610..2541368 | peptidase S1 and S6, chymotrypsin/Hap; OCAR_6598 | N/A | Click |
| 16 | 2541405..2541647 | hypothetical protein; OCAR_6599 | N/A | Click |
| 17 | complement(2541717..2541968) | type IV pilus assembly PilZ; OCAR_6600 | N/A | Click |
| 18 | complement(2542113..2542460) | hypothetical protein; OCAR_6601 | N/A | Click |
| 19 | complement(2542578..2543846) | PHAGE_Salmon_ST64B: Major capsid protein precursor; OCAR_6602; phage(gi23505451) | 2e-83 | Click |
| 20 | complement(2543976..2544338) | hypothetical protein; OCAR_6603 | N/A | Click |
| 21 | complement(2544331..2544561) | hypothetical protein; OCAR_6604 | N/A | Click |
| 22 | complement(2544558..2544686) | hypothetical protein; OCAR_6605 | N/A | Click |
| 23 | complement(2544683..2545198) | PHAGE_Tetras_SI1: phage prohead protease; OCAR_6606; phage(gi472342256) | 3e-20 | Click |
| 24 | complement(2545412..2545612) | hypothetical protein; OCAR_6607 | N/A | Click |
| 25 | complement(2545609..2545809) | hypothetical protein; OCAR_6608 | N/A | Click |
| 26 | complement(2545943..2547118) | PHAGE_Marino_P12026: phage portal protein, HK97 family; OCAR_6609; phage(gi399528319) | 8e-25 | Click |