Definition Streptococcus pyogenes NZ131 chromosome, complete genome.
Accession NC_011375
Length 1,815,785
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 364040..364063  attL    GTCCACAAAAAGGTGAACAAATTT  N/A  Click
2 complement(364340..365032)  PHAGE_Lister_2389: Gp21 protein; Spy49_0350c; phage(gi17488525)  1e-56  Click
3 complement(365190..365372)  hypothetical protein; Spy49_0351c  N/A  Click
4 complement(365511..365696)  hypothetical protein; Spy49_0352c  N/A  Click
5 complement(365740..366108)  PHAGE_Strept_5: hypothetical protein SpyM3_1330; Spy49_0353c; phage(gi28876412)  7e-16  Click
6 complement(366083..366256)  hypothetical protein; Spy49_0354c  N/A  Click
7 complement(366619..367032)  PHAGE_Strept_3: hypothetical protein SpyM3_1124; Spy49_0355c; phage(gi28876294)  8e-08  Click
8 complement(367138..367644)  PHAGE_Strept_3: hypothetical protein SpyM3_1122; Spy49_0356c; phage(gi28876292)  9e-16  Click
9 complement(367681..368010)  hypothetical protein; Spy49_0357c  N/A  Click
10 complement(368000..368602)  PHAGE_Lactoc_bIL311: Orf14; Spy49_0358c; phage(gi13095672)  9e-17  Click
11 complement(368868..369134)  hypothetical protein; Spy49_0359c  N/A  Click
12 complement(369315..369488)  phage protein; Spy49_0360c  N/A  Click
13 complement(369776..371464)  PHAGE_Lactoc_bIL310: helicase; Spy49_0361c; phage(gi13095886)  4e-59  Click
14 complement(371433..372290)  PHAGE_Strept_5: hypothetical protein SpyM3_1341; Spy49_0362c; phage(gi28876423)  2e-10  Click
15 complement(372434..372712)  PHAGE_Lactoc_bIL310: hypothetical protein bIL310p19; Spy49_0363c; phage(gi13095880)  1e-06  Click
16 complement(372715..372828)  hypothetical protein; Spy49_0364c  N/A  Click
17 complement(373055..373249)  hypothetical protein; Spy49_0365c  N/A  Click
18 complement(373246..373455)  hypothetical protein; Spy49_0366c  N/A  Click
19 complement(373980..374228)  hypothetical protein; Spy49_0367c  N/A  Click
20 complement(374244..374429)  hypothetical protein; Spy49_0368c  N/A  Click
21 374597..375265  PHAGE_Strept_5: hypothetical protein SpyM3_1346; Spy49_0369; phage(gi28876428)  1e-16  Click
22 375347..376492  PHAGE_Lactoc_bIL310: integrase; Spy49_0370; phage(gi13095863)  9e-67  Click
23 376493..376516  attR    GTCCACAAAAAGGTGAACAAATTT  N/A  Click
24 377362..377598  PHAGE_Lister_A511: gp64; Spy49_0371; phage(gi157325209)  6e-06  Click
25 377591..378289  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; Spy49_0372; phage(gi116326757)  5e-14  Click
Region 2, total : 48 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 746864..747733  PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; Spy49_0742; phage(gi448260372)  2e-101  Click
2 747733..748326  PHAGE_Sphing_PAU: gp186; Spy49_0744; phage(gi435844689)  2e-08  Click
3 748570..749610  PHAGE_Escher_phAPEC8: putative dTDP-glucose 4,6-dehydratase; Spy49_0745; phage(gi448260373)  6e-69  Click
4 749588..749638  attL    AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAACG  N/A  Click
5 complement(749693..750832)  PHAGE_Strept_SMP: integrase; Spy49_0746c; phage(gi119953753)  2e-122  Click
6 complement(750960..751226)  hypothetical protein; Spy49_0747c  N/A  Click
7 complement(751238..751624)  PHAGE_Strept_1: hypothetical protein SpyM3_0683; Spy49_0748c; phage(gi28876148)  3e-50  Click
8 complement(751627..751977)  PHAGE_Strept_6: putative repressor; Spy49_0749c; phage(gi28876485)  3e-34  Click
9 752273..752443  hypothetical protein; Spy49_0750  N/A  Click
10 complement(752469..753257)  hypothetical protein; Spy49_0751c  N/A  Click
11 753308..753499  PHAGE_Strept_6: putative transcriptional repressor; Spy49_0752; phage(gi28876484)  3e-08  Click
12 753578..753889  PHAGE_Strept_SMP: excisionase; Spy49_0753; phage(gi119953759)  3e-49  Click
13 753891..754061  PHAGE_Strept_6: hypothetical protein SpyM3_1451; Spy49_0754; phage(gi28876481)  8e-23  Click
14 754054..754257  PHAGE_Strept_6: hypothetical protein SpyM3_1450; Spy49_0755; phage(gi28876480)  7e-19  Click
15 754254..754640  PHAGE_Strept_6: hypothetical protein SpyM3_1449; Spy49_0756; phage(gi28876479)  2e-64  Click
16 754786..754989  PHAGE_Strept_6: hypothetical protein SpyM3_1447; Spy49_0757; phage(gi28876477)  2e-32  Click
17 755077..755376  PHAGE_Strept_6: hypothetical protein SpyM3_1446; Spy49_0759; phage(gi28876476)  1e-48  Click
18 755376..756533  PHAGE_Strept_6: hypothetical protein SpyM3_1445; Spy49_0760; phage(gi28876475)  0.0  Click
19 756548..757105  PHAGE_Strept_6: hypothetical protein SpyM3_1444; Spy49_0761; phage(gi28876474)  1e-100  Click
20 757148..759070  PHAGE_Strept_6: putative DNA polymerase A domain; Spy49_0762; phage(gi28876473)  0.0  Click
21 759075..761459  PHAGE_Strept_6: putative DNA primase/helicase; Spy49_0763; phage(gi28876472)  0.0  Click
22 761827..762120  PHAGE_Strept_6: hypothetical protein SpyM3_1441; Spy49_0764; phage(gi28876471)  5e-48  Click
23 762117..763439  PHAGE_Strept_6: putative helicase; Spy49_0765; phage(gi28876470)  0.0  Click
24 763603..763875  PHAGE_Strept_6: hypothetical protein SpyM3_1438; Spy49_0766; phage(gi28876468)  5e-44  Click
25 764008..764424  PHAGE_Strept_6: putative transcriptional activator; Spy49_0767; phage(gi28876467)  7e-75  Click
26 764496..764966  PHAGE_Strept_6: putative terminase small subunit; Spy49_0768; phage(gi28876466)  8e-69  Click
27 764956..766233  PHAGE_Strept_6: putative terminase large subunit; Spy49_0769; phage(gi28876465)  0.0  Click
28 766249..767781  PHAGE_Strept_6: hypothetical protein SpyM3_1434; Spy49_0770; phage(gi28876464)  0.0  Click
29 767747..769189  PHAGE_Strept_6: hypothetical protein SpyM3_1433; Spy49_0771; phage(gi28876463)  0.0  Click
30 769410..769802  PHAGE_Strept_6: hypothetical protein SpyM3_1431; Spy49_0772; phage(gi28876461)  2e-42  Click
31 769845..770414  PHAGE_Strept_6: hypothetical protein SpyM3_1430; Spy49_0773; phage(gi28876460)  1e-101  Click
32 770427..771314  PHAGE_Strept_6: hypothetical protein SpyM3_1429; Spy49_0774; phage(gi28876459)  5e-165  Click
33 771326..771682  PHAGE_Strept_6: hypothetical protein SpyM3_1428; Spy49_0775; phage(gi28876458)  2e-61  Click
34 771693..771971  PHAGE_Strept_6: hypothetical protein SpyM3_1427; Spy49_0776; phage(gi28876457)  2e-49  Click
35 771968..772312  PHAGE_Strept_6: hypothetical protein SpyM3_1426; Spy49_0777; phage(gi28876456)  1e-55  Click
36 772316..772675  PHAGE_Strept_6: hypothetical protein SpyM3_1425; Spy49_0778; phage(gi28876455)  2e-61  Click
37 772687..773286  PHAGE_Strept_6: hypothetical protein SpyM3_1424; Spy49_0779; phage(gi28876454)  1e-111  Click
38 773393..773794  PHAGE_Strept_6: hypothetical protein SpyM3_1423; Spy49_0780; phage(gi28876453)  1e-68  Click
39 773869..774102  PHAGE_Strept_6: hypothetical protein SpyM3_1422; Spy49_0781; phage(gi28876452)  2e-37  Click
40 774117..778499  PHAGE_Strept_6: putative tail protein; Spy49_0782; phage(gi28876451)  0.0  Click
41 778511..779353  PHAGE_Strept_6: hypothetical protein SpyM3_1420; Spy49_0783; phage(gi28876450)  3e-160  Click
42 779363..781342  PHAGE_Strept_6: hypothetical protein SpyM3_1419; Spy49_0784; phage(gi28876449)  0.0  Click
43 781339..783582  PHAGE_Strept_6: hypothetical protein SpyM3_1417; Spy49_0785; phage(gi28876447)  3e-177  Click
44 783594..783755  hypothetical protein; Spy49_0786  N/A  Click
45 783758..784369  PHAGE_Strept_6: hypothetical protein SpyM3_1415; Spy49_0788; phage(gi28876445)  2e-92  Click
46 784379..784834  PHAGE_Strept_3: putative holin protein; Spy49_0789; phage(gi28876267)  2e-81  Click
47 784952..785704  PHAGE_Strept_phi3396: phage-associated cell wall hydrolase; Spy49_0790; phage(gi126011118)  4e-143  Click
48 785870..786157  hypothetical protein; Spy49_0791  N/A  Click
49 786363..787073  PHAGE_Staphy_phiNM3: enterotoxin type A precursor; Spy49_0792; phage(gi118725111)  5e-18  Click
50 787434..787484  attR    AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAACG  N/A  Click
Region 3, total : 78 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1447026..1447040  attL    TATGCTATTAAACAC  N/A  Click
2 complement(1460135..1460356)  PHAGE_Staphy_2638A: ORF052; Spy49_1452c; phage(gi66395489)  1e-10  Click
3 1460526..1460900  PHAGE_Staphy_2638A: ORF016; Spy49_1453; phage(gi66395466)  9e-19  Click
4 complement(1461245..1461424)  PHAGE_Strept_4: hypothetical protein SpyM3_1203; Spy49_1454c; phage(gi28876317)  5e-19  Click
5 1461662..1462462  PHAGE_Strept_3: putative mitogenic factor; Spy49_1455; phage(gi28876265)  9e-06  Click
6 1462842..1463168  hypothetical protein; Spy49_1456  N/A  Click
7 complement(1463218..1464084)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_52; Spy49_1457c; phage(gi16271828)  1e-161  Click
8 complement(1464072..1464596)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_51; Spy49_1458c; phage(gi16271827)  2e-100  Click
9 complement(1464736..1465944)  PHAGE_Temper_1: cell wall hydrolase; Spy49_1459c; phage(gi16271826)  0.0  Click
10 complement(1466060..1466287)  PHAGE_Strept_6: putative holin; Spy49_1460c; phage(gi28876443)  1e-34  Click
11 complement(1466284..1466559)  PHAGE_Strept_2: hypothetical protein SpyM3_0924; Spy49_1461c; phage(gi28876208)  2e-45  Click
12 complement(1466569..1467186)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_47; Spy49_1462c; phage(gi16271823)  3e-96  Click
13 complement(1467189..1467350)  hypothetical protein; Spy49_1463c  N/A  Click
14 complement(1467364..1469274)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_45; Spy49_1464c; phage(gi16271821)  0.0  Click
15 complement(1469290..1470294)  PHAGE_Temper_1: hyaluronidase; Spy49_1465c; phage(gi16271820)  2e-122  Click
16 complement(1470291..1472342)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_43; Spy49_1466c; phage(gi16271819)  6e-107  Click
17 complement(1472339..1473118)  PHAGE_Strept_1: putative tail protein; Spy49_1467c; phage(gi28876188)  3e-65  Click
18 complement(1473151..1476786)  PHAGE_Strept_Sfi11: putative minor tail protein; Spy49_1468c; phage(gi9635024)  0.0  Click
19 complement(1476801..1477130)  PHAGE_Entero_phiEf11: putative phage protein; Spy49_1470c; phage(gi282598753)  4e-11  Click
20 complement(1477172..1477531)  PHAGE_Brocho_NF5: gp12; Spy49_1471c; phage(gi327197597)  1e-22  Click
21 complement(1477584..1478237)  PHAGE_Entero_phiEf11: phage major tail protein; Spy49_1472c; phage(gi282598708)  5e-41  Click
22 complement(1478247..1478636)  PHAGE_Lactoc_ul36: structural protein; Spy49_1474c; phage(gi21716117)  3e-46  Click
23 complement(1478633..1478989)  PHAGE_Entero_phiEf11: phage protein HK97; Spy49_1475c; phage(gi282598738)  9e-19  Click
24 complement(1478979..1479287)  PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_40; Spy49_1476c; phage(gi13487841)  7e-11  Click
25 complement(1479284..1479637)  PHAGE_Strept_Sfi11: gp113; Spy49_1477c; phage(gi9635017)  1e-26  Click
26 complement(1479651..1479893)  hypothetical protein; Spy49_1478c  N/A  Click
27 complement(1479903..1480985)  PHAGE_Strept_2: capsid; Spy49_1479c; phage(gi273809734)  3e-108  Click
28 complement(1480988..1481368)  PHAGE_Strept_2: capsid; Spy49_1480c; phage(gi273809733)  3e-10  Click
29 complement(1481378..1481911)  PHAGE_Staphy_StB27: scaffold protein; Spy49_1481c; phage(gi431809709)  4e-21  Click
30 complement(1482055..1482321)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_31; Spy49_1482c; phage(gi16271807)  2e-28  Click
31 complement(1482324..1482638)  PHAGE_Strept_SMP: hypothetical protein; Spy49_1483c; phage(gi119953780)  1e-39  Click
32 complement(1482708..1482893)  hypothetical protein; Spy49_1484c  N/A  Click
33 complement(1482897..1484459)  PHAGE_Strept_2972: head protein; Spy49_1485c; phage(gi66391765)  4e-61  Click
34 complement(1484440..1485942)  PHAGE_Strept_2972: portal protein; Spy49_1486c; phage(gi66391764)  1e-144  Click
35 complement(1485954..1487243)  PHAGE_Strept_SMP: terminase large subunit; Spy49_1487c; phage(gi119953777)  0.0  Click
36 complement(1487221..1487703)  PHAGE_Staphy_phiETA2: small terminase; Spy49_1488c; phage(gi122891755)  7e-20  Click
37 complement(1488535..1488975)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_22; Spy49_1489c; phage(gi16271798)  2e-81  Click
38 complement(1489415..1489936)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_21; Spy49_1491c; phage(gi16271797)  3e-71  Click
39 complement(1489933..1490226)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_20; Spy49_1492c; phage(gi16271796)  4e-10  Click
40 complement(1490223..1490408)  PHAGE_Strept_5: hypothetical protein SpyM3_1332; Spy49_1493c; phage(gi28876414)  9e-29  Click
41 complement(1490506..1490991)  PHAGE_Strept_2: putative DNA methyltransferase; Spy49_1494c; phage(gi28876237)  1e-68  Click
42 complement(1491276..1491680)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_19; Spy49_1496c; phage(gi16271795)  2e-69  Click
43 complement(1491664..1491954)  PHAGE_Lactoc_949: hypothetical protein; Spy49_1497c; phage(gi327197849)  2e-12  Click
44 complement(1492193..1492549)  PHAGE_Strept_5: hypothetical protein SpyM3_1337; Spy49_1498c; phage(gi28876419)  1e-62  Click
45 complement(1492625..1492987)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_15; Spy49_1499c; phage(gi16271791)  6e-46  Click
46 complement(1493196..1493621)  PHAGE_Temper_1: single-strand binding protein; Spy49_1500c; phage(gi16271789)  3e-71  Click
47 complement(1493614..1494288)  PHAGE_Temper_1: recombination protein; Spy49_1501c; phage(gi16271788)  1e-38  Click
48 complement(1494289..1494435)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_11; Spy49_1502c; phage(gi16271787)  5e-20  Click
49 complement(1494793..1495047)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_10; Spy49_1504c; phage(gi16271786)  2e-43  Click
50 complement(1495034..1495381)  hypothetical protein; Spy49_1505c  N/A  Click
51 complement(1495522..1497093)  PHAGE_Strept_SM1: gp21; Spy49_1506c; phage(gi32469452)  3e-64  Click
52 complement(1497209..1497652)  PHAGE_Staphy_55: ORF029; Spy49_1507c; phage(gi66396142)  1e-14  Click
53 complement(1498078..1498350)  hypothetical protein; Spy49_1509c  N/A  Click
54 complement(1498523..1498702)  hypothetical protein; Spy49_1510c  N/A  Click
55 complement(1498833..1498967)  PHAGE_Strept_2: hypothetical protein SpyM3_0965; Spy49_1511c; phage(gi28876249)  3e-20  Click
56 complement(1499249..1499608)  PHAGE_Lactoc_bIL285: Orf30; Spy49_1512c; phage(gi13095710)  7e-10  Click
57 complement(1499682..1499939)  PHAGE_Strept_MM1: hypothetical protein MM1p07; Spy49_1513c; phage(gi15088750)  7e-10  Click
58 complement(1500142..1500483)  hypothetical protein; Spy49_1514c  N/A  Click
59 complement(1500755..1500904)  PHAGE_Temper_1: hypothetical protein phiNIH1.1_06; Spy49_1516c; phage(gi16271782)  1e-21  Click
60 complement(1500936..1501664)  PHAGE_Temper_1: antirepressor; Spy49_1517c; phage(gi16271781)  4e-114  Click
61 complement(1501697..1501885)  PHAGE_Strept_PH15: cro-like protein; Spy49_1518c; phage(gi190151423)  4e-12  Click
62 complement(1502073..1502255)  hypothetical protein; Spy49_1520c  N/A  Click
63 complement(1502532..1503293)  PHAGE_Lactob_Lj928: putative antirepressor; Spy49_1521c; phage(gi41179298)  5e-88  Click
64 1503460..1503732  PHAGE_Strept_2: hypothetical protein SpyM3_0972; Spy49_1522; phage(gi28876256)  8e-15  Click
65 1504006..1504473  hypothetical protein; Spy49_1525  N/A  Click
66 1504589..1505368  PHAGE_Strept_2: hypothetical protein SpyM3_0974; Spy49_1526; phage(gi28876258)  3e-142  Click
67 complement(1505502..1505660)  PHAGE_Strept_2: hypothetical protein SpyM3_0976; Spy49_1528c; phage(gi28876260)  2e-18  Click
68 1506024..1506782  PHAGE_Strept_PH15: putative transcriptional repressor; Spy49_1529; phage(gi190151419)  1e-49  Click
69 1506855..1507277  PHAGE_Lactob_Lj965: putative superinfection immunity protein; Spy49_1530; phage(gi41179219)  2e-12  Click
70 1507236..1507250  attR    TATGCTATTAAACAC  N/A  Click
71 1507398..1508534  PHAGE_Entero_phiEf11: phage integrase protein; Spy49_1531; phage(gi282598730)  2e-53  Click
72 1508573..1508893  hypothetical protein; Spy49_1532  N/A  Click
73 complement(1508950..1509687)  Transcriptional regulator, MerR family; Spy49_1533c  N/A  Click
74 complement(1509840..1510427)  PHAGE_Clostr_phiMMP04: DNA polymerase III alpha subunit; Spy49_1534c; phage(gi414090475)  1e-10  Click
75 complement(1510476..1511057)  PHAGE_Human__8: LANA; Spy49_1535c; phage(gi139472804)  3e-06  Click
76 complement(1511183..1511698)  PROPHAGE_Shewan_MR-1: transposase, putative; Spy49_1536c; phage(gi24373689)  5e-11  Click
77 complement(1511601..1512305)  PROPHAGE_Escher_MG1655: predicted transposase; Spy49_1537c; phage(gi16131356)  2e-33  Click
78 1512526..1513695  hypothetical protein; Spy49_1538  N/A  Click
79 complement(1513790..1514461)  deoxyribose-phosphate aldolase; Spy49_1540c  N/A  Click
80 complement(1514491..1515693)  PHAGE_Musca__virus: hypothetical protein MdSGHV066; Spy49_1541c; phage(gi187903103)  1e-28  Click