Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_011365
Length 3,887,492
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2697347..2697360  attL    CCATTCCACGACCT  N/A  Click
2 complement(2697694..2698863)  PHAGE_Entero_mEp460: integrase; Gdia_2435; phage(gi428782338)  1e-21  Click
3 complement(2699508..2699651)  hypothetical protein; Gdia_2436  N/A  Click
4 complement(2700432..2700632)  hypothetical protein; Gdia_2438  N/A  Click
5 complement(2700636..2701232)  PHAGE_Equid__4: envelope glycoprotein J; Gdia_2439; phage(gi9629801)  5e-05  Click
6 complement(2701241..2701726)  hypothetical protein; Gdia_2440  N/A  Click
7 complement(2701723..2702175)  hypothetical protein; Gdia_2441  N/A  Click
8 complement(2702172..2703020)  PHAGE_Synech_S_CRM01: phage tail collar domain-containing protein; Gdia_2442; phage(gi333798177)  6e-21  Click
9 2703523..2704305  hypothetical protein; Gdia_2443  N/A  Click
10 complement(2704231..2705079)  hypothetical protein; Gdia_2444  N/A  Click
11 complement(2705137..2705547)  hypothetical protein; Gdia_2445  N/A  Click
12 complement(2705911..2710155)  PHAGE_Myxoco_Mx8: virion structural protein; Gdia_2446; phage(gi15320627)  2e-08  Click
13 complement(2710329..2712485)  PHAGE_Yersin_phiR1_37: putative tape measure tail fibre protein; Gdia_2447; phage(gi358356566)  5e-05  Click
14 complement(2712489..2713241)  PHAGE_Vibrio_VvAW1: hypothetical protein; Gdia_2448; phage(gi460042891)  6e-14  Click
15 complement(2713238..2713714)  GCN5-like N-acetyltransferase; Gdia_2449  N/A  Click
16 complement(2713711..2714055)  PHAGE_Vibrio_VvAW1: hypothetical protein; Gdia_2450; phage(gi460042893)  2e-07  Click
17 complement(2714169..2715161)  PHAGE_Synech_S_CBS4: tail fiber protein; Gdia_2451; phage(gi374531790)  2e-05  Click
18 complement(2715161..2715793)  hypothetical protein; Gdia_2452  N/A  Click
19 complement(2715793..2719422)  PHAGE_Vibrio_VvAW1: hypothetical protein; Gdia_2453; phage(gi460042895)  2e-58  Click
20 complement(2719428..2721326)  PHAGE_Vibrio_VvAW1: hypothetical protein; Gdia_2454; phage(gi460042896)  2e-05  Click
21 complement(2721323..2721829)  hypothetical protein; Gdia_2455  N/A  Click
22 complement(2721840..2722247)  PHAGE_Pelagi_HTVC008M: hypothetical protein; Gdia_2456; phage(gi460042523)  8e-05  Click
23 2733550..2733563  attR    CCATTCCACGACCT  N/A  Click
Region 2, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2739399..2739827  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp46; Gdia_2481; phage(gi90592682)  2e-05  Click
2 2740334..2740345  attL    ATTATCGTGTGA  N/A  Click
3 complement(2740663..2740923)  hypothetical protein; Gdia_2483  N/A  Click
4 2741081..2741236  hypothetical protein; Gdia_2484  N/A  Click
5 2741299..2741859  PHAGE_Bordet_1: hypothetical protein BIP-1p35; Gdia_2485; phage(gi45580780)  5e-17  Click
6 2741921..2743324  PHAGE_Bordet_1: hypothetical protein BMP-1p35; Gdia_2486; phage(gi45569529)  4e-125  Click
7 2743392..2744510  PHAGE_Iodoba_phiPLPE: gp77 putative tail-fiber protein; Gdia_2487; phage(gi197085691)  1e-43  Click
8 2744586..2744885  hypothetical protein; Gdia_2488  N/A  Click
9 2745157..2745369  hypothetical protein; Gdia_2489  N/A  Click
10 2745366..2746250  PHAGE_Mycoba_Halo: gp42; Gdia_2490; phage(gi109392329)  1e-15  Click
11 2746247..2747281  PHAGE_Myxoco_Mx8: hypothetical protein Mx8p81; Gdia_2491; phage(gi15320651)  9e-23  Click
12 2747278..2747538  hypothetical protein; Gdia_2492  N/A  Click
13 2747535..2747765  hypothetical protein; Gdia_2493  N/A  Click
14 2747752..2747859  hypothetical protein; Gdia_2494  N/A  Click
15 2747862..2748620  PHAGE_Xantho_CP2: hypothetical protein; Gdia_2495; phage(gi448245174)  7e-66  Click
16 2748617..2749120  hypothetical protein; Gdia_2496  N/A  Click
17 2749117..2749314  hypothetical protein; Gdia_2497  N/A  Click
18 2749311..2749832  hypothetical protein; Gdia_2498  N/A  Click
19 2750036..2750227  hypothetical protein; Gdia_2499  N/A  Click
20 2750458..2750874  hypothetical protein; Gdia_2500  N/A  Click
21 2751044..2752090  PHAGE_Pseudo_D3: integrase; Gdia_2501; phage(gi9635596)  1e-12  Click
22 2765770..2765781  attR    ATTATCGTGTGA  N/A  Click
Region 3, total : 77 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2905935..2905946  attL    GCCCTGCGGGCC  N/A  Click
2 2919305..2920612  PHAGE_Natria_PhiCh1: M.PhiCh1-II; Gdia_2652; phage(gi22091184)  7e-23  Click
3 2921266..2922383  PROPHAGE_Xantho_33913: IS1477 transposase; Gdia_2654; phage(gi77747809)  2e-65  Click
4 complement(2922638..2924953)  PHAGE_Ectoca_1: EsV-1-186; Gdia_2655; phage(gi13242656)  1e-05  Click
5 2925139..2925600  PHAGE_Burkho_KL3: gp46; Gdia_2656; phage(gi327198091)  2e-32  Click
6 2926027..2927370  PHAGE_Staphy_phiPV83: transposase; Gdia_2657; phage(gi9635722)  6e-24  Click
7 2927674..2928510  PROPHAGE_Xantho_33913: IS1480 transposase; Gdia_2658; phage(gi21231089)  8e-26  Click
8 complement(2928675..2929103)  hypothetical protein; Gdia_2659  N/A  Click
9 complement(2929173..2930075)  PHAGE_Burkho_phi1026b: gp58; Gdia_2660; phage(gi38707948)  7e-07  Click
10 2930175..2930186  attL    GCGTTTATCGCC  N/A  Click
11 2930258..2931031  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; Gdia_2661; phage(gi116326757)  6e-15  Click
12 2931162..2932508  PHAGE_Lactob_KC5a: putative minor tail protein; Gdia_2662; phage(gi90592623)  6e-06  Click
13 complement(2932485..2933315)  PHAGE_Ostreo_2: putative 3-methyl-2-oxobutanoate hydroxymethyltransferase; Gdia_2663; phage(gi314055124)  4e-41  Click
14 complement(2933358..2933936)  GCN5-like N-acetyltransferase; Gdia_2664  N/A  Click
15 complement(2933975..2935999)  AsmA family protein; Gdia_2665  N/A  Click
16 complement(2936010..2938745)  PHAGE_Equid__4: large tegument protein; Gdia_2666; phage(gi9629749)  2e-14  Click
17 complement(2938885..2939793)  ribonuclease BN; Gdia_2667  N/A  Click
18 complement(2939824..2940006)  hypothetical protein; Gdia_2668  N/A  Click
19 complement(2940289..2940969)  TetR family transcriptional regulator; Gdia_2669  N/A  Click
20 2941156..2942754  NodT family RND efflux system, outer membrane lipoprotein; Gdia_2670  N/A  Click
21 2942930..2943343  TraR/DksA family transcriptional regulator; Gdia_2671  N/A  Click
22 2943429..2943503  tRNA  N/A  Click
23 complement(2943521..2943847)  hypothetical protein; Gdia_2672  N/A  Click
24 2944001..2944315  hypothetical protein; Gdia_2673  N/A  Click
25 2944323..2944505  PHAGE_Haemop_HP2: hypothetical protein HP2p13; Gdia_2674; phage(gi19289355)  2e-08  Click
26 2944523..2944918  PHAGE_Haemop_HP2: hypothetical protein HP2p14; Gdia_2675; phage(gi17981828)  3e-16  Click
27 2945994..2947517  PROPHAGE_Escher_CFT073: transposase; Gdia_2677; phage(gi26248360)  3e-12  Click
28 2947507..2948286  PROPHAGE_Escher_CFT073: transposase/IS protein; Gdia_2678; phage(gi26248359)  7e-35  Click
29 complement(2948367..2948483)  hypothetical protein; Gdia_2679  N/A  Click
30 complement(2948551..2948760)  hypothetical protein; Gdia_2680  N/A  Click
31 complement(2949033..2949239)  PHAGE_Lactoc_bIL312: Csp; Gdia_2681; phage(gi13095918)  6e-12  Click
32 2949621..2949773  hypothetical protein; Gdia_2682  N/A  Click
33 2950160..2952793  PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; Gdia_2683  N/A  Click
34 2952994..2953911  phosphate ABC transporter inner membrane subunit PstC; Gdia_2684  N/A  Click
35 2953913..2954818  phosphate ABC transporter inner membrane subunit PstA; Gdia_2685  N/A  Click
36 2954853..2955650  PHAGE_Plankt_PaV_LD: ABC transporter; Gdia_2686; phage(gi371496158)  3e-23  Click
37 2955676..2956371  phosphate uptake regulator PhoU; Gdia_2687  N/A  Click
38 2956384..2957115  PHAGE_Feldma_virus: putative sensor histidine kinase; Gdia_2688; phage(gi197322366)  3e-09  Click
39 2957153..2958361  PHAGE_Ectoca_1: EsV-1-65; Gdia_2689; phage(gi13242537)  2e-13  Click
40 2958525..2959529  PHAGE_Synech_S_SKS1: ABC-type phosphate transport system; Gdia_2690; phage(gi472340910)  2e-46  Click
41 2960049..2961806  hypothetical protein; Gdia_2691  N/A  Click
42 2962016..2963371  PHAGE_Ostreo_2: high affinity phosphate transporter; Gdia_2692; phage(gi314055317)  4e-12  Click
43 complement(2963429..2963707)  PHAGE_Aeromo_Aes012: putative XRE family plasmid maintenance system antidote protein; Gdia_2693; phage(gi472438177)  4e-08  Click
44 complement(2963724..2964023)  plasmid maintenance system killer; Gdia_2694  N/A  Click
45 2964141..2964965  PROPHAGE_Xantho_33913: IS1480 transposase; Gdia_2695; phage(gi21231089)  8e-23  Click
46 complement(2964982..2965707)  PHAGE_Plankt_PaV_LD: ABC transporter; Gdia_2696; phage(gi371496158)  1e-30  Click
47 complement(2965704..2967257)  polar amino acid ABC transporter inner membrane subunit; Gdia_2697  N/A  Click
48 2967483..2968223  aldolase II superfamily protein; Gdia_2698  N/A  Click
49 complement(2968231..2968659)  ArsR family transcriptional regulator; Gdia_2699  N/A  Click
50 complement(2968656..2969282)  Peroxiredoxin; Gdia_2700  N/A  Click
51 2969460..2970422  beta-lactamase domain-containing protein; Gdia_2701  N/A  Click
52 2970433..2971248  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; Gdia_2702; phage(gi163932195)  9e-06  Click
53 2971348..2971608  PHAGE_Equid__9: envelope glycoprotein J; Gdia_2703; phage(gi216905924)  3e-06  Click
54 complement(2971665..2972141)  CBS domain-containing protein; Gdia_2704  N/A  Click
55 complement(2972263..2972961)  phosphoribosyltransferase; Gdia_2705  N/A  Click
56 complement(2972963..2974351)  Erythromycin esterase; Gdia_2706  N/A  Click
57 2974562..2975548  secretion protein HlyD family protein; Gdia_2707  N/A  Click
58 2975545..2977620  PHAGE_Plankt_PaV_LD: ABC transporter; Gdia_2708; phage(gi371496158)  2e-19  Click
59 complement(2978912..2980810)  PHAGE_Bovine_5: large tegument protein; Gdia_2710; phage(gi296316024)  1e-06  Click
60 2981135..2982478  PHAGE_Staphy_phiPV83: transposase; Gdia_2711; phage(gi9635722)  6e-24  Click
61 2982577..2983401  PROPHAGE_Xantho_33913: IS1480 transposase; Gdia_2712; phage(gi21231089)  8e-23  Click
62 2983525..2983812  hypothetical protein; Gdia_2713  N/A  Click
63 2983809..2985176  PHAGE_Lactob_KC5a: putative minor tail protein; Gdia_2714; phage(gi90592623)  1e-06  Click
64 2985280..2987133  dihydroxy-acid dehydratase; Gdia_2715  N/A  Click
65 2987638..2990811  acriflavin resistance protein; Gdia_2716  N/A  Click
66 2990811..2991992  RND family efflux transporter MFP subunit; Gdia_2717  N/A  Click
67 2991989..2993584  NodT family RND efflux system, outer membrane lipoprotein; Gdia_2718  N/A  Click
68 complement(2993648..2994550)  PHAGE_Burkho_phi1026b: gp58; Gdia_2719; phage(gi38707948)  6e-14  Click
69 2994570..2994581  attR    GCGTTTATCGCC  N/A  Click
70 2994709..2994987  glutathione S-transferase domain-containing protein; Gdia_2720  N/A  Click
71 complement(2994937..2995929)  PHAGE_RD114_retrovirus: gag-pol precursor polyprotein; Gdia_2721; phage(gi157939613)  6e-05  Click
72 complement(2996186..2996491)  hypothetical protein; Gdia_2722  N/A  Click
73 complement(2996488..2997141)  PHAGE_Halomo_1: partitioning protein; Gdia_2723; phage(gi167832378)  2e-21  Click
74 complement(2997280..2998225)  transposase IS630; Gdia_2724  N/A  Click
75 complement(2998370..2998957)  PHAGE_Acanth_1: hypothetical protein ATCV1_Z833L; Gdia_2725; phage(gi155371780)  3e-05  Click
76 complement(2999104..2999400)  WGR domain-containing protein; Gdia_2726  N/A  Click
77 complement(2999993..3000829)  PROPHAGE_Xantho_33913: IS1480 transposase; Gdia_2727; phage(gi21231089)  8e-26  Click
78 3000948..3001772  PROPHAGE_Xantho_33913: IS1480 transposase; Gdia_2728; phage(gi21231089)  8e-23  Click
79 complement(3001808..3002865)  PROPHAGE_Shewan_MR-1: putative transposase; Gdia_2729; phage(gi28275189)  3e-17  Click
80 3003025..3004368  PHAGE_Staphy_phiPV83: transposase; Gdia_2730; phage(gi9635722)  6e-24  Click
81 complement(3004542..3005792)  PROPHAGE_Mesorh_MAFF303099: transposase; Gdia_2731; phage(gi13475318)  3e-21  Click
82 3007434..3007445  attR    GCCCTGCGGGCC  N/A  Click