Definition | Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 chromosome, complete genome. |
---|---|
Accession | NC_011294 |
Length | 4,685,848 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 9 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 920105..920118 | attL TTTCCGCCAGCTCA | N/A | Click |
2 | 932038..933696 | PHAGE_Entero_P2: Old; SEN0847; phage(gi9630369) | 8e-06 | Click |
3 | complement(933693..934661) | virK protein; SEN0848 | N/A | Click |
4 | 934789..935907 | PHAGE_Cronob_ENT47670: putative tail protein; SEN0849; phage(gi431810494) | 4e-05 | Click |
5 | 935904..937850 | PHAGE_Plankt_PaV_LD: ABC transporter; SEN0850; phage(gi371496158) | 5e-41 | Click |
6 | complement(937980..938201) | PHAGE_Lactoc_bIL312: Csp; SEN0851; phage(gi13095918) | 5e-14 | Click |
7 | 938525..938845 | PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; SEN0852; phage(gi414087232) | 3e-05 | Click |
8 | 938876..941152 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SEN0853; phage(gi15800640) | 0.0 | Click |
9 | complement(941365..941562) | hypothetical protein; SEN0853B | N/A | Click |
10 | complement(941724..942101) | PROPHAGE_Escher_CFT073: P4 family integrase; SEN0853A; phage(gi26248244) | 2e-48 | Click |
11 | 949171..949184 | attR TTTCCGCCAGCTCA | N/A | Click |
Region 2, total : 22 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1222614..1223312) | PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; SEN1125; phage(gi414087193) | 1e-15 | Click |
2 | complement(1223336..1223992) | hypothetical protein; SEN1126 | N/A | Click |
3 | complement(1224100..1224330) | PHAGE_Pectob_ZF40: putative DNA polymerase; SEN1127; phage(gi422936677) | 6e-17 | Click |
4 | 1224462..1224842 | hypothetical protein; SEN1128 | N/A | Click |
5 | 1224843..1225718 | cation transporter; SEN1129 | N/A | Click |
6 | 1225735..1226088 | PHAGE_Entero_PsP3: gp28; SEN1130; phage(gi41057381) | 5e-08 | Click |
7 | 1226390..1226426 | attL CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA | N/A | Click |
8 | complement(1226471..1227550) | PHAGE_Entero_mEp235: integrase; SEN1131; phage(gi428781836) | 2e-75 | Click |
9 | complement(1227525..1227803) | excisionase; SEN1132 | N/A | Click |
10 | 1228217..1230196 | PHAGE_Parame_FR483: hypothetical protein FR483_N003L; SEN1133; phage(gi155370101) | 3e-128 | Click |
11 | 1230217..1230453 | phage membrane protein; SEN1134 | N/A | Click |
12 | 1230491..1230613 | PHAGE_Stx2_c_II: putative host killer protein; SEN1135; phage(gi302393105) | 5e-05 | Click |
13 | 1230831..1231133 | PHAGE_Salmon_SPN3UB: hypothetical protein; SEN1136; phage(gi423262436) | 3e-08 | Click |
14 | 1231197..1231796 | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SEN1137; phage(gi169257286) | 1e-55 | Click |
15 | 1232150..1232839 | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SEN1139; phage(gi169257244) | 8e-90 | Click |
16 | 1232930..1233460 | hypothetical protein; SEN1140 | N/A | Click |
17 | complement(1233834..1234283) | PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; SEN1142; phage(gi169257293) | 1e-82 | Click |
18 | complement(1234644..1235330) | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SEN1143; phage(gi169257294) | 2e-133 | Click |
19 | 1235591..1235935 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SEN1144; phage(gi169257295) | 3e-59 | Click |
20 | 1235919..1236371 | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SEN1145; phage(gi169257296) | 2e-83 | Click |
21 | 1236389..1236868 | PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SEN1146; phage(gi169257297) | 1e-86 | Click |
22 | complement(1237763..1238296) | PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SEN1149; phage(gi169257313) | 3e-102 | Click |
23 | 1238386..1239081 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SEN1150; phage(gi169257314) | 8e-135 | Click |
24 | 1246011..1246047 | attR CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA | N/A | Click |
Region 3, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1464241..1465395 | PHAGE_Celeri_P12053L: putative phage tail fiber protein; SEN1374; phage(gi399528893) | 7e-05 | Click |
2 | 1465541..1466524 | zinc transporter; SEN1375 | N/A | Click |
3 | 1467011..1468384 | PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; SEN1376; phage(gi310831360) | 2e-45 | Click |
4 | complement(1468428..1469363) | PHAGE_Parame_FR483: hypothetical protein FR483_N404R; SEN1377; phage(gi155370502) | 5e-09 | Click |
5 | complement(1469680..1470303) | PHAGE_Entero_mEp237: exonuclease; SEN1379; phage(gi435439296) | 9e-21 | Click |
6 | complement(1470325..1470642) | hypothetical protein; SEN1380 | N/A | Click |
7 | complement(1470727..1470948) | PHAGE_Escher_P13374: host killing protein; SEN1381; phage(gi410491620) | 4e-05 | Click |
8 | 1471371..1471907 | phage membrane protein; SEN1382 | N/A | Click |
9 | complement(1472555..1473022) | PHAGE_Pseudo_F116: transcriptional regulator; SEN1383; phage(gi56692918) | 9e-10 | Click |
10 | 1473295..1473624 | phage encoded DNA-binding protein; SEN1384 | N/A | Click |
11 | complement(1473786..1474340) | phage membrane protein; SEN1385 | N/A | Click |
12 | complement(1474337..1475269) | hypothetical protein; SEN1386 | N/A | Click |
13 | 1475639..1475851 | PHAGE_Stx2_c_II: putative host killer protein; SEN1387; phage(gi302393105) | 1e-29 | Click |
14 | 1476127..1476312 | hypothetical protein; SEN1388 | N/A | Click |
15 | 1476375..1476974 | PHAGE_Entero_mEp237: hypothetical protein; SEN1389; phage(gi435439315) | 9e-57 | Click |
16 | 1476974..1477264 | PHAGE_Entero_mEp237: hypothetical protein; SEN1390; phage(gi435439317) | 2e-23 | Click |
17 | 1477141..1477797 | PHAGE_Salmon_vB_SosS_Oslo: antitermination protein Q; SEN1391; phage(gi399528832) | 1e-06 | Click |
18 | 1479296..1479544 | hypothetical protein; SEN1392 | N/A | Click |
19 | 1479968..1480363 | PHAGE_Entero_P1: TciA; SEN1393; phage(gi46401694) | 5e-48 | Click |
20 | 1480457..1480744 | PHAGE_Entero_phiP27: putative holin; SEN1394; phage(gi18249893) | 7e-21 | Click |
21 | 1480741..1481286 | PHAGE_Erwini_vB_EamP_S6: endolysin; SEN1395; phage(gi422935930) | 2e-68 | Click |
22 | 1481283..1481492 | phage encoded exported protein; SEN1396 | N/A | Click |
23 | 1482132..1482470 | PHAGE_Acinet_ZZ1: putative quaternary ammonium compound-resistance protein qacE; SEN1399; phage(gi392973036) | 2e-13 | Click |
Region 4, total : 58 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2007699..2007710 | attL TTATTTAAGCTC | N/A | Click |
2 | complement(2015142..2016224) | PROPHAGE_Shewan_MR-1: IS110 family transposase; SEN1915; phage(gi24375433) | 1e-61 | Click |
3 | complement(2016626..2017474) | hypothetical protein; SEN1916 | N/A | Click |
4 | complement(2017471..2017848) | hypothetical protein; SEN1917 | N/A | Click |
5 | complement(2017923..2018048) | hypothetical protein; SEN1918 | N/A | Click |
6 | complement(2018241..2018423) | hypothetical protein; SEN1919 | N/A | Click |
7 | 2018506..2018520 | attL CGGTTTTCGAGACCG | N/A | Click |
8 | complement(2018787..2019008) | PHAGE_Salmon_ST64B: DNA invertase pin protein; SEN1919A; phage(gi23505471) | 7e-38 | Click |
9 | 2019221..2020228 | PHAGE_Salmon_ST64B: hypothetical protein sb26; SEN1920; phage(gi23505470) | 0.0 | Click |
10 | complement(2020513..2021082) | PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; SEN1921; phage(gi23505469) | 2e-109 | Click |
11 | complement(2021082..2022644) | PHAGE_Salmon_ST64B: tail protein; SEN1922; phage(gi23505468) | 0.0 | Click |
12 | complement(2022631..2023218) | PHAGE_Salmon_ST64B: putative tail protein; SEN1923; phage(gi23505467) | 2e-115 | Click |
13 | complement(2023221..2024300) | PHAGE_Salmon_ST64B: putative head assembly protein; SEN1924; phage(gi23505465) | 3e-96 | Click |
14 | complement(2024293..2024706) | PHAGE_Salmon_ST64B: putative tail protein; SEN1925; phage(gi23505464) | 2e-77 | Click |
15 | complement(2024711..2025244) | PHAGE_Salmon_ST64B: putative base plate assembly protein; SEN1926; phage(gi23505463) | 2e-98 | Click |
16 | complement(2025244..2026302) | PHAGE_Salmon_ST64B: Tail protein; SEN1927; phage(gi23505462) | 0.0 | Click |
17 | complement(2026299..2027639) | PHAGE_Salmon_ST64B: tail/DNA circulation protein; SEN1928; phage(gi23505461) | 0.0 | Click |
18 | complement(2027673..2029601) | PHAGE_Salmon_ST64B: tail protein; SEN1929; phage(gi23505460) | 0.0 | Click |
19 | complement(2029686..2030012) | PHAGE_Salmon_ST64B: hypothetical protein sb15; SEN1930; phage(gi23505501) | 1e-55 | Click |
20 | complement(2030009..2030365) | PHAGE_Salmon_ST64B: Tail tube protein; SEN1931; phage(gi23505459) | 8e-65 | Click |
21 | complement(2030365..2031861) | PHAGE_Salmon_ST64B: Tail Sheath protein; SEN1932; phage(gi23505458) | 0.0 | Click |
22 | complement(2031851..2032015) | PHAGE_Salmon_ST64B: hypothetical protein sb12; SEN1932A; phage(gi23505457) | 9e-27 | Click |
23 | complement(2032019..2032579) | PHAGE_Salmon_ST64B: hypothetical protein sb11; SEN1933; phage(gi23505456) | 3e-106 | Click |
24 | complement(2032576..2033088) | PHAGE_Salmon_ST64B: hypothetical protein sb10; SEN1934; phage(gi23505455) | 3e-90 | Click |
25 | complement(2033060..2033464) | PHAGE_Salmon_ST64B: hypothetical protein sb9; SEN1935; phage(gi23505454) | 1e-70 | Click |
26 | complement(2033461..2033784) | PHAGE_Salmon_ST64B: hypothetical protein sb8; SEN1935A; phage(gi23505453) | 3e-38 | Click |
27 | complement(2033864..2035093) | PHAGE_Salmon_ST64B: Major capsid protein precursor; SEN1936; phage(gi23505451) | 4e-17 | Click |
28 | complement(2035103..2035705) | PHAGE_Entero_SfV: capsid protease; SEN1937; phage(gi19548994) | 2e-101 | Click |
29 | complement(2035698..2036948) | PHAGE_Entero_SfV: portal protein; SEN1938; phage(gi19548993) | 0.0 | Click |
30 | complement(2037064..2038794) | PHAGE_Entero_SfV: large terminase subunit; SEN1939; phage(gi19548992) | 0.0 | Click |
31 | complement(2038794..2039234) | PHAGE_Salmon_ST64B: terminase small subunit; SEN1940; phage(gi23505446) | 2e-11 | Click |
32 | complement(2039378..2039728) | PHAGE_Salmon_ST64B: hypothetical protein sb56; SEN1941; phage(gi23505500) | 7e-66 | Click |
33 | complement(2039752..2040291) | PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; SEN1942; phage(gi16765210) | 9e-68 | Click |
34 | complement(2040288..2040905) | PHAGE_Salmon_ST64B: lytic enzyme (putative glycohydrolase); SEN1943; phage(gi23505496) | 1e-93 | Click |
35 | complement(2041173..2041562) | PHAGE_Entero_mEp390: putative holin; SEN1944; phage(gi428782712) | 1e-45 | Click |
36 | complement(2041651..2042223) | phage membrane protein; SEN1945 | N/A | Click |
37 | complement(2042236..2043327) | exported phage protein; SEN1946 | N/A | Click |
38 | complement(2043359..2044111) | PHAGE_Entero_SfV: antitermination protein Q; SEN1947; phage(gi19549033) | 1e-137 | Click |
39 | complement(2044125..2045114) | PHAGE_Salmon_ST64B: hypothetical protein sb47; SEN1948; phage(gi23505491) | 5e-137 | Click |
40 | complement(2045122..2045982) | PHAGE_Salmon_ST64B: hypothetical protein sb46; SEN1949; phage(gi23505490) | 9e-161 | Click |
41 | complement(2045999..2046388) | PHAGE_Salmon_ST64B: holiday-junction resolvase; SEN1949A; phage(gi23505489) | 3e-65 | Click |
42 | complement(2046397..2047278) | PHAGE_Entero_P1: Dmt; SEN1950; phage(gi46401691) | 2e-69 | Click |
43 | complement(2047275..2047748) | PHAGE_Salmon_ST64B: putative transcriptional activator; SEN1951; phage(gi23505487) | 1e-30 | Click |
44 | complement(2047745..2048719) | PHAGE_Entero_mEp390: hypothetical protein; SEN1952; phage(gi428782706) | 9e-41 | Click |
45 | complement(2048937..2050094) | PHAGE_Salmon_ST64B: putative antirepressor; SEN1953; phage(gi23505485) | 0.0 | Click |
46 | complement(2050091..2050645) | PHAGE_Salmon_ST64B: hypothetical protein sb40; SEN1954; phage(gi23505484) | 5e-46 | Click |
47 | 2050996..2051691 | PHAGE_Salmon_ST64B: regulatory protein; SEN1955; phage(gi23505482) | 2e-128 | Click |
48 | complement(2052158..2052409) | phage protein; SEN1957 | N/A | Click |
49 | complement(2052419..2052880) | phage protein; SEN1957A | N/A | Click |
50 | 2052979..2053896 | PHAGE_Entero_P1: HrdC; SEN1959; phage(gi46401690) | 7e-87 | Click |
51 | 2053991..2054530 | PHAGE_Salmon_ST64B: hypothetical protein sb35; SEN1960; phage(gi23505479) | 7e-100 | Click |
52 | 2054828..2055343 | PHAGE_Salmon_ST64B: hypothetical protein sb33; SEN1961; phage(gi23505477) | 2e-94 | Click |
53 | 2055340..2055699 | PHAGE_Salmon_SPN1S: eaf; SEN1962; phage(gi374531242) | 3e-60 | Click |
54 | 2055971..2056264 | PHAGE_Klebsi_phiKO2: Gp43; SEN1963; phage(gi46402129) | 2e-35 | Click |
55 | 2056261..2057124 | PHAGE_Salmon_ST64B: hypothetical protein sb31; SEN1964; phage(gi23505475) | 1e-22 | Click |
56 | 2057121..2057690 | PHAGE_Salmon_ST64B: Endodeoxyribonuclease; SEN1965; phage(gi23505474) | 1e-109 | Click |
57 | 2057715..2057957 | PHAGE_Salmon_ST64B: hypothetical protein sb29; SEN1965A; phage(gi23505473) | 2e-41 | Click |
58 | 2057959..2058948 | PHAGE_Salmon_ST64B: Integrase protein; SEN1966; phage(gi23505472) | 0.0 | Click |
59 | complement(2059065..2059151) | tRNA | N/A | Click |
60 | 2059109..2059123 | attR CGGTTTTCGAGACCG | N/A | Click |
61 | 2059240..2060037 | hypothetical protein; SEN1967 | N/A | Click |
62 | 2060138..2060210 | tRNA | N/A | Click |
63 | 2061108..2061180 | tRNA | N/A | Click |
64 | 2061363..2062637 | PROPHAGE_Shigel_301: putative P4-type integrase; SEN1970; phage(gi24114228) | 9e-140 | Click |
65 | 2072028..2072039 | attR TTATTTAAGCTC | N/A | Click |