Definition Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 chromosome, complete genome.
Accession NC_011294
Length 4,685,848
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 920105..920118  attL    TTTCCGCCAGCTCA  N/A  Click
2 932038..933696  PHAGE_Entero_P2: Old; SEN0847; phage(gi9630369)  8e-06  Click
3 complement(933693..934661)  virK protein; SEN0848  N/A  Click
4 934789..935907  PHAGE_Cronob_ENT47670: putative tail protein; SEN0849; phage(gi431810494)  4e-05  Click
5 935904..937850  PHAGE_Plankt_PaV_LD: ABC transporter; SEN0850; phage(gi371496158)  5e-41  Click
6 complement(937980..938201)  PHAGE_Lactoc_bIL312: Csp; SEN0851; phage(gi13095918)  5e-14  Click
7 938525..938845  PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; SEN0852; phage(gi414087232)  3e-05  Click
8 938876..941152  PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SEN0853; phage(gi15800640)  0.0  Click
9 complement(941365..941562)  hypothetical protein; SEN0853B  N/A  Click
10 complement(941724..942101)  PROPHAGE_Escher_CFT073: P4 family integrase; SEN0853A; phage(gi26248244)  2e-48  Click
11 949171..949184  attR    TTTCCGCCAGCTCA  N/A  Click
Region 2, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1222614..1223312)  PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; SEN1125; phage(gi414087193)  1e-15  Click
2 complement(1223336..1223992)  hypothetical protein; SEN1126  N/A  Click
3 complement(1224100..1224330)  PHAGE_Pectob_ZF40: putative DNA polymerase; SEN1127; phage(gi422936677)  6e-17  Click
4 1224462..1224842  hypothetical protein; SEN1128  N/A  Click
5 1224843..1225718  cation transporter; SEN1129  N/A  Click
6 1225735..1226088  PHAGE_Entero_PsP3: gp28; SEN1130; phage(gi41057381)  5e-08  Click
7 1226390..1226426  attL    CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA  N/A  Click
8 complement(1226471..1227550)  PHAGE_Entero_mEp235: integrase; SEN1131; phage(gi428781836)  2e-75  Click
9 complement(1227525..1227803)  excisionase; SEN1132  N/A  Click
10 1228217..1230196  PHAGE_Parame_FR483: hypothetical protein FR483_N003L; SEN1133; phage(gi155370101)  3e-128  Click
11 1230217..1230453  phage membrane protein; SEN1134  N/A  Click
12 1230491..1230613  PHAGE_Stx2_c_II: putative host killer protein; SEN1135; phage(gi302393105)  5e-05  Click
13 1230831..1231133  PHAGE_Salmon_SPN3UB: hypothetical protein; SEN1136; phage(gi423262436)  3e-08  Click
14 1231197..1231796  PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SEN1137; phage(gi169257286)  1e-55  Click
15 1232150..1232839  PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SEN1139; phage(gi169257244)  8e-90  Click
16 1232930..1233460  hypothetical protein; SEN1140  N/A  Click
17 complement(1233834..1234283)  PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; SEN1142; phage(gi169257293)  1e-82  Click
18 complement(1234644..1235330)  PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SEN1143; phage(gi169257294)  2e-133  Click
19 1235591..1235935  PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SEN1144; phage(gi169257295)  3e-59  Click
20 1235919..1236371  PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SEN1145; phage(gi169257296)  2e-83  Click
21 1236389..1236868  PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SEN1146; phage(gi169257297)  1e-86  Click
22 complement(1237763..1238296)  PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SEN1149; phage(gi169257313)  3e-102  Click
23 1238386..1239081  PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SEN1150; phage(gi169257314)  8e-135  Click
24 1246011..1246047  attR    CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA  N/A  Click
Region 3, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1464241..1465395  PHAGE_Celeri_P12053L: putative phage tail fiber protein; SEN1374; phage(gi399528893)  7e-05  Click
2 1465541..1466524  zinc transporter; SEN1375  N/A  Click
3 1467011..1468384  PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; SEN1376; phage(gi310831360)  2e-45  Click
4 complement(1468428..1469363)  PHAGE_Parame_FR483: hypothetical protein FR483_N404R; SEN1377; phage(gi155370502)  5e-09  Click
5 complement(1469680..1470303)  PHAGE_Entero_mEp237: exonuclease; SEN1379; phage(gi435439296)  9e-21  Click
6 complement(1470325..1470642)  hypothetical protein; SEN1380  N/A  Click
7 complement(1470727..1470948)  PHAGE_Escher_P13374: host killing protein; SEN1381; phage(gi410491620)  4e-05  Click
8 1471371..1471907  phage membrane protein; SEN1382  N/A  Click
9 complement(1472555..1473022)  PHAGE_Pseudo_F116: transcriptional regulator; SEN1383; phage(gi56692918)  9e-10  Click
10 1473295..1473624  phage encoded DNA-binding protein; SEN1384  N/A  Click
11 complement(1473786..1474340)  phage membrane protein; SEN1385  N/A  Click
12 complement(1474337..1475269)  hypothetical protein; SEN1386  N/A  Click
13 1475639..1475851  PHAGE_Stx2_c_II: putative host killer protein; SEN1387; phage(gi302393105)  1e-29  Click
14 1476127..1476312  hypothetical protein; SEN1388  N/A  Click
15 1476375..1476974  PHAGE_Entero_mEp237: hypothetical protein; SEN1389; phage(gi435439315)  9e-57  Click
16 1476974..1477264  PHAGE_Entero_mEp237: hypothetical protein; SEN1390; phage(gi435439317)  2e-23  Click
17 1477141..1477797  PHAGE_Salmon_vB_SosS_Oslo: antitermination protein Q; SEN1391; phage(gi399528832)  1e-06  Click
18 1479296..1479544  hypothetical protein; SEN1392  N/A  Click
19 1479968..1480363  PHAGE_Entero_P1: TciA; SEN1393; phage(gi46401694)  5e-48  Click
20 1480457..1480744  PHAGE_Entero_phiP27: putative holin; SEN1394; phage(gi18249893)  7e-21  Click
21 1480741..1481286  PHAGE_Erwini_vB_EamP_S6: endolysin; SEN1395; phage(gi422935930)  2e-68  Click
22 1481283..1481492  phage encoded exported protein; SEN1396  N/A  Click
23 1482132..1482470  PHAGE_Acinet_ZZ1: putative quaternary ammonium compound-resistance protein qacE; SEN1399; phage(gi392973036)  2e-13  Click
Region 4, total : 58 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2007699..2007710  attL    TTATTTAAGCTC  N/A  Click
2 complement(2015142..2016224)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SEN1915; phage(gi24375433)  1e-61  Click
3 complement(2016626..2017474)  hypothetical protein; SEN1916  N/A  Click
4 complement(2017471..2017848)  hypothetical protein; SEN1917  N/A  Click
5 complement(2017923..2018048)  hypothetical protein; SEN1918  N/A  Click
6 complement(2018241..2018423)  hypothetical protein; SEN1919  N/A  Click
7 2018506..2018520  attL    CGGTTTTCGAGACCG  N/A  Click
8 complement(2018787..2019008)  PHAGE_Salmon_ST64B: DNA invertase pin protein; SEN1919A; phage(gi23505471)  7e-38  Click
9 2019221..2020228  PHAGE_Salmon_ST64B: hypothetical protein sb26; SEN1920; phage(gi23505470)  0.0  Click
10 complement(2020513..2021082)  PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; SEN1921; phage(gi23505469)  2e-109  Click
11 complement(2021082..2022644)  PHAGE_Salmon_ST64B: tail protein; SEN1922; phage(gi23505468)  0.0  Click
12 complement(2022631..2023218)  PHAGE_Salmon_ST64B: putative tail protein; SEN1923; phage(gi23505467)  2e-115  Click
13 complement(2023221..2024300)  PHAGE_Salmon_ST64B: putative head assembly protein; SEN1924; phage(gi23505465)  3e-96  Click
14 complement(2024293..2024706)  PHAGE_Salmon_ST64B: putative tail protein; SEN1925; phage(gi23505464)  2e-77  Click
15 complement(2024711..2025244)  PHAGE_Salmon_ST64B: putative base plate assembly protein; SEN1926; phage(gi23505463)  2e-98  Click
16 complement(2025244..2026302)  PHAGE_Salmon_ST64B: Tail protein; SEN1927; phage(gi23505462)  0.0  Click
17 complement(2026299..2027639)  PHAGE_Salmon_ST64B: tail/DNA circulation protein; SEN1928; phage(gi23505461)  0.0  Click
18 complement(2027673..2029601)  PHAGE_Salmon_ST64B: tail protein; SEN1929; phage(gi23505460)  0.0  Click
19 complement(2029686..2030012)  PHAGE_Salmon_ST64B: hypothetical protein sb15; SEN1930; phage(gi23505501)  1e-55  Click
20 complement(2030009..2030365)  PHAGE_Salmon_ST64B: Tail tube protein; SEN1931; phage(gi23505459)  8e-65  Click
21 complement(2030365..2031861)  PHAGE_Salmon_ST64B: Tail Sheath protein; SEN1932; phage(gi23505458)  0.0  Click
22 complement(2031851..2032015)  PHAGE_Salmon_ST64B: hypothetical protein sb12; SEN1932A; phage(gi23505457)  9e-27  Click
23 complement(2032019..2032579)  PHAGE_Salmon_ST64B: hypothetical protein sb11; SEN1933; phage(gi23505456)  3e-106  Click
24 complement(2032576..2033088)  PHAGE_Salmon_ST64B: hypothetical protein sb10; SEN1934; phage(gi23505455)  3e-90  Click
25 complement(2033060..2033464)  PHAGE_Salmon_ST64B: hypothetical protein sb9; SEN1935; phage(gi23505454)  1e-70  Click
26 complement(2033461..2033784)  PHAGE_Salmon_ST64B: hypothetical protein sb8; SEN1935A; phage(gi23505453)  3e-38  Click
27 complement(2033864..2035093)  PHAGE_Salmon_ST64B: Major capsid protein precursor; SEN1936; phage(gi23505451)  4e-17  Click
28 complement(2035103..2035705)  PHAGE_Entero_SfV: capsid protease; SEN1937; phage(gi19548994)  2e-101  Click
29 complement(2035698..2036948)  PHAGE_Entero_SfV: portal protein; SEN1938; phage(gi19548993)  0.0  Click
30 complement(2037064..2038794)  PHAGE_Entero_SfV: large terminase subunit; SEN1939; phage(gi19548992)  0.0  Click
31 complement(2038794..2039234)  PHAGE_Salmon_ST64B: terminase small subunit; SEN1940; phage(gi23505446)  2e-11  Click
32 complement(2039378..2039728)  PHAGE_Salmon_ST64B: hypothetical protein sb56; SEN1941; phage(gi23505500)  7e-66  Click
33 complement(2039752..2040291)  PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; SEN1942; phage(gi16765210)  9e-68  Click
34 complement(2040288..2040905)  PHAGE_Salmon_ST64B: lytic enzyme (putative glycohydrolase); SEN1943; phage(gi23505496)  1e-93  Click
35 complement(2041173..2041562)  PHAGE_Entero_mEp390: putative holin; SEN1944; phage(gi428782712)  1e-45  Click
36 complement(2041651..2042223)  phage membrane protein; SEN1945  N/A  Click
37 complement(2042236..2043327)  exported phage protein; SEN1946  N/A  Click
38 complement(2043359..2044111)  PHAGE_Entero_SfV: antitermination protein Q; SEN1947; phage(gi19549033)  1e-137  Click
39 complement(2044125..2045114)  PHAGE_Salmon_ST64B: hypothetical protein sb47; SEN1948; phage(gi23505491)  5e-137  Click
40 complement(2045122..2045982)  PHAGE_Salmon_ST64B: hypothetical protein sb46; SEN1949; phage(gi23505490)  9e-161  Click
41 complement(2045999..2046388)  PHAGE_Salmon_ST64B: holiday-junction resolvase; SEN1949A; phage(gi23505489)  3e-65  Click
42 complement(2046397..2047278)  PHAGE_Entero_P1: Dmt; SEN1950; phage(gi46401691)  2e-69  Click
43 complement(2047275..2047748)  PHAGE_Salmon_ST64B: putative transcriptional activator; SEN1951; phage(gi23505487)  1e-30  Click
44 complement(2047745..2048719)  PHAGE_Entero_mEp390: hypothetical protein; SEN1952; phage(gi428782706)  9e-41  Click
45 complement(2048937..2050094)  PHAGE_Salmon_ST64B: putative antirepressor; SEN1953; phage(gi23505485)  0.0  Click
46 complement(2050091..2050645)  PHAGE_Salmon_ST64B: hypothetical protein sb40; SEN1954; phage(gi23505484)  5e-46  Click
47 2050996..2051691  PHAGE_Salmon_ST64B: regulatory protein; SEN1955; phage(gi23505482)  2e-128  Click
48 complement(2052158..2052409)  phage protein; SEN1957  N/A  Click
49 complement(2052419..2052880)  phage protein; SEN1957A  N/A  Click
50 2052979..2053896  PHAGE_Entero_P1: HrdC; SEN1959; phage(gi46401690)  7e-87  Click
51 2053991..2054530  PHAGE_Salmon_ST64B: hypothetical protein sb35; SEN1960; phage(gi23505479)  7e-100  Click
52 2054828..2055343  PHAGE_Salmon_ST64B: hypothetical protein sb33; SEN1961; phage(gi23505477)  2e-94  Click
53 2055340..2055699  PHAGE_Salmon_SPN1S: eaf; SEN1962; phage(gi374531242)  3e-60  Click
54 2055971..2056264  PHAGE_Klebsi_phiKO2: Gp43; SEN1963; phage(gi46402129)  2e-35  Click
55 2056261..2057124  PHAGE_Salmon_ST64B: hypothetical protein sb31; SEN1964; phage(gi23505475)  1e-22  Click
56 2057121..2057690  PHAGE_Salmon_ST64B: Endodeoxyribonuclease; SEN1965; phage(gi23505474)  1e-109  Click
57 2057715..2057957  PHAGE_Salmon_ST64B: hypothetical protein sb29; SEN1965A; phage(gi23505473)  2e-41  Click
58 2057959..2058948  PHAGE_Salmon_ST64B: Integrase protein; SEN1966; phage(gi23505472)  0.0  Click
59 complement(2059065..2059151)  tRNA  N/A  Click
60 2059109..2059123  attR    CGGTTTTCGAGACCG  N/A  Click
61 2059240..2060037  hypothetical protein; SEN1967  N/A  Click
62 2060138..2060210  tRNA  N/A  Click
63 2061108..2061180  tRNA  N/A  Click
64 2061363..2062637  PROPHAGE_Shigel_301: putative P4-type integrase; SEN1970; phage(gi24114228)  9e-140  Click
65 2072028..2072039  attR    TTATTTAAGCTC  N/A  Click