Definition Burkholderia cenocepacia J2315 chromosome chromosome 1, complete sequence.
Accession NC_011000
Length 3,870,082
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 33 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(99160..100047)  PHAGE_Vibrio_pYD21_A: hypothetical protein; BCAL0080; phage(gi472340474)  5e-05  Click
2 100299..100374  tRNA  N/A  Click
3 100330..100360  attL    CTCCGAAGGCAGGGGTTGCTGGTTCGATCCC  N/A  Click
4 complement(100429..101505)  PHAGE_Burkho_phiE202: gp10, site-specific recombinase, phage integrase family; BCAL0081; phage(gi134288747)  7e-74  Click
5 complement(101373..101693)  hypothetical protein; BCAL0082  N/A  Click
6 complement(102200..104992)  PHAGE_Burkho_phiE202: gp11, conserved hypothetical protein; BCAL0083; phage(gi134288779)  0.0  Click
7 complement(104998..105255)  PHAGE_Burkho_phiE202: gp12, hypothetical protein; BCAL0083a; phage(gi134288787)  9e-19  Click
8 complement(105383..105631)  PHAGE_Burkho_phiE202: gp19, conserved hypothetical protein; BCAL0084; phage(gi134288771)  1e-39  Click
9 complement(105619..105798)  hypothetical protein; BCAL0084a  N/A  Click
10 complement(105813..106028)  PHAGE_Burkho_phiE202: gp20, conserved hypothetical protein; BCAL0085; phage(gi134288764)  4e-08  Click
11 106119..106610  PHAGE_Burkho_phiE202: gp21; BCAL0086; phage(gi134288765)  3e-14  Click
12 107182..108714  PHAGE_Bordet_1: reverse transcriptase; BCAL0087; phage(gi41179367)  1e-14  Click
13 108758..109138  PHAGE_Burkho_KL3: gp14; BCAL0088; phage(gi327198059)  2e-16  Click
14 complement(109326..110396)  PHAGE_Burkho_phiE202: gp24, fels-2 prophage protein; BCAL0089; phage(gi134288767)  2e-139  Click
15 complement(110393..110824)  PHAGE_Burkho_phiE202: gp25, fels-2 prophage protein; BCAL0090; phage(gi134288777)  7e-45  Click
16 complement(110847..113417)  PHAGE_Burkho_phiE202: gp26, bacteriophage membrane protein; BCAL0091; phage(gi134288775)  7e-151  Click
17 complement(113433..113546)  PHAGE_Burkho_phiE202: gp27, phage tail protein, P2 GpE family; BCAL0092; phage(gi134288776)  2e-11  Click
18 complement(113555..113926)  PHAGE_Burkho_phiE202: gp28, phage tail protein E; BCAL0093; phage(gi134288780)  3e-31  Click
19 complement(114003..114512)  PHAGE_Burkho_phiE202: gp29, phage major tail tube protein; BCAL0094; phage(gi134288759)  2e-66  Click
20 complement(114541..115713)  PHAGE_Burkho_phiE202: gp30, phage tail sheath protein; BCAL0095; phage(gi134288772)  0.0  Click
21 complement(115768..116502)  PHAGE_Burkho_phiE202: gp31, bacteriophage-acquired protein; BCAL0096; phage(gi134288758)  5e-101  Click
22 complement(116518..119169)  PHAGE_Burkho_phiE202: gp32, bacteriophage protein; BCAL0097; phage(gi134288773)  0.0  Click
23 complement(119176..119643)  PHAGE_Burkho_phiE202: gp33, phage tail protein I; BCAL0098; phage(gi134288744)  4e-55  Click
24 complement(119711..120625)  PHAGE_Burkho_phiE202: gp34, phage baseplate assembly protein; BCAL0099; phage(gi134288785)  8e-104  Click
25 complement(120622..120984)  PHAGE_Burkho_phiE202: gp35, phage baseplate assembly protein; BCAL0100; phage(gi134288768)  2e-43  Click
26 complement(120981..121790)  PHAGE_Burkho_phiE202: gp36, gpV; BCAL0101; phage(gi134288750)  9e-86  Click
27 complement(122176..122625)  PHAGE_Burkho_phiE202: gp40, P2 phage tail completion protein R (GpR); BCAL0102; phage(gi134288754)  3e-29  Click
28 complement(122742..123182)  PHAGE_Burkho_phiE202: gp42, protein LysB; BCAL0103; phage(gi134288770)  2e-21  Click
29 complement(123179..124030)  PHAGE_Burkho_phiE202: gp43, bacteriophage-acquired protein; BCAL0104; phage(gi134288769)  2e-93  Click
30 complement(124033..124299)  PHAGE_Burkho_phiE202: gp44, putative bacteriophage membrane protein; BCAL0105; phage(gi134288752)  1e-25  Click
31 complement(124301..124645)  PHAGE_Burkho_phiE202: gp45, putative bacteriophage membrane protein; BCAL0106; phage(gi134288749)  1e-43  Click
32 complement(124662..124868)  PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; BCAL0107; phage(gi134288782)  3e-18  Click
33 125266..125296  attR    CTCCGAAGGCAGGGGTTGCTGGTTCGATCCC  N/A  Click
34 125430..127049  PHAGE_Human__2: ubiquitin E3 ligase ICP0; BCAL0108; phage(gi109676722)  8e-05  Click
35 127259..129232  putative TPR repeat protein; BCAL0109  N/A  Click
36 complement(129387..130529)  PHAGE_Ostreo_1: hypothetical protein H665_p041; BCAL0110; phage(gi260665911)  5e-13  Click
Region 2, total : 18 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 620851..620863  attL    AGCACGACGACCG  N/A  Click
2 624880..625857  PHAGE_Bacill_GIL16c: putative lytic enzyme; BCAL0572; phage(gi62327545)  2e-17  Click
3 complement(625970..626787)  PROPHAGE_Shewan_MR-1: ISSod6, transposase; BCAL0573; phage(gi24374783)  2e-18  Click
4 626995..627750  YcgR family protein; BCAL0575  N/A  Click
5 627932..629863  PHAGE_Equid_8: envelope glycoprotein J; BCAL0576; phage(gi386522795)  3e-10  Click
6 629881..631116  PHAGE_Equid__1: envelope glycoprotein J; BCAL0577; phage(gi50313312)  7e-06  Click
7 631395..632702  PHAGE_Lactob_KC5a: putative minor tail protein; BCAL0578; phage(gi90592623)  1e-07  Click
8 complement(632766..633650)  PHAGE_Burkho_phi1026b: gp58; BCAL0579; phage(gi38707948)  2e-24  Click
9 633735..634406  putative chromate transport protein; BCAL0580  N/A  Click
10 634403..634930  putative chromate transporter; BCAL0581  N/A  Click
11 complement(634977..635315)  hypothetical protein; BCAL0582  N/A  Click
12 635603..636349  hypothetical protein; BCAL0583  N/A  Click
13 636694..637815  putative outer membrane porin protein; BCAL0584  N/A  Click
14 638184..638414  hypothetical protein; BCAL0585  N/A  Click
15 638655..640010  glutathione reductase; BCAL0586  N/A  Click
16 640537..641214  putative lipoprotein; BCAL0587  N/A  Click
17 641272..641703  putative lipoprotein; BCAL0588  N/A  Click
18 641714..642388  putative lipoprotein; BCAL0589  N/A  Click
19 642101..642113  attR    AGCACGACGACCG  N/A  Click
20 complement(642473..643309)  PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; BCAL0590; phage(gi17546155)  5e-110  Click
Region 3, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1301322..1303331)  PHAGE_Salmon_SPN1S: putative lipopolysaccharide modification acyltransferase 1; BCAL1191; phage(gi374531215)  5e-18  Click
2 1303456..1303824  PHAGE_Strept_PH15: putative transcriptional repressor; BCAL1192; phage(gi190151419)  2e-06  Click
3 complement(1303821..1304171)  hypothetical protein; BCAL1193  N/A  Click
4 complement(1304173..1304472)  hypothetical protein; BCAL1194  N/A  Click
5 complement(1304575..1305381)  PHAGE_Aeromo_vB_AsaM_56: putative methylase; BCAL1195; phage(gi422937523)  2e-15  Click
6 complement(1305448..1306539)  PHAGE_Cyprin_1: membrane protein ORF65; BCAL1196; phage(gi422933603)  5e-06  Click
7 complement(1306536..1307450)  hypothetical protein; BCAL1197  N/A  Click
8 complement(1307501..1307716)  PHAGE_Pseudo_JBD5: hypothetical protein; BCAL1198; phage(gi448245000)  2e-07  Click
9 complement(1307728..1308723)  PHAGE_Bacill_1: Putative endonuclease; BCAL1199; phage(gi155042966)  1e-55  Click
10 complement(1308794..1308994)  hypothetical protein; BCAL1200  N/A  Click
11 complement(1308991..1309959)  PHAGE_Mycoba_Rosebush: gp83; BCAL1201; phage(gi29566276)  3e-16  Click
12 complement(1310052..1310483)  PHAGE_Vibrio_VP882: phage-related tail protein; BCAL1202; phage(gi126010872)  4e-06  Click
13 complement(1310476..1310670)  hypothetical protein; BCAL1202A  N/A  Click
14 complement(1310718..1311389)  PHAGE_Vibrio_VP882: phage-related tail protein; BCAL1203; phage(gi126010872)  6e-07  Click
15 1311831..1314635  PHAGE_Bacill_36: PcrA helicase; BCAL1204; phage(gi156564011)  4e-06  Click
16 complement(1315386..1316372)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; BCAL1205; phage(gi116326757)  3e-70  Click
17 complement(1316527..1317531)  PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; BCAL1207; phage(gi326781942)  2e-05  Click
Region 4, total : 49 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1729077..1729787)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp49; BCAL1559; phage(gi198449311)  7e-134  Click
2 complement(1729861..1732089)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp48; BCAL1560; phage(gi198449310)  0.0  Click
3 complement(1732097..1733074)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp47; BCAL1561; phage(gi198449309)  0.0  Click
4 complement(1733074..1733673)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp46; BCAL1562; phage(gi198449308)  2e-116  Click
5 complement(1733676..1734797)  PHAGE_Burkho_KS10: MuW-like tail protein; BCAL1563; phage(gi198449307)  0.0  Click
6 complement(1734794..1735375)  PHAGE_Burkho_KS10: MuV-like tail protein; BCAL1564; phage(gi198449306)  5e-112  Click
7 complement(1735460..1735981)  PHAGE_Burkho_KS10: MuQ-like baseplate assembly protein; BCAL1565; phage(gi198449305)  1e-96  Click
8 complement(1735981..1737138)  PHAGE_Burkho_KS10: MuQ-like tail protein; BCAL1566; phage(gi198449304)  0.0  Click
9 complement(1737144..1738514)  PHAGE_Burkho_KS10: putative DNA circularization protein; BCAL1567; phage(gi198449303)  0.0  Click
10 complement(1738514..1740940)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp40; BCAL1568; phage(gi198449302)  0.0  Click
11 complement(1740998..1741552)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp39; BCAL1569; phage(gi198449301)  2e-99  Click
12 complement(1741635..1742006)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp38; BCAL1570; phage(gi198449300)  5e-68  Click
13 complement(1742052..1743530)  PHAGE_Burkho_KS10: MuL-like protein; BCAL1571; phage(gi198449299)  0.0  Click
14 complement(1743574..1743777)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp36; BCAL1572; phage(gi198449298)  5e-32  Click
15 complement(1743836..1744438)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp35; BCAL1573; phage(gi198449297)  5e-114  Click
16 complement(1744438..1744869)  PHAGE_Burkho_KS10: MuG-like protein; BCAL1574; phage(gi198449296)  9e-79  Click
17 complement(1744866..1745369)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp33; BCAL1575; phage(gi198449295)  1e-95  Click
18 complement(1745366..1745755)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp32; BCAL1576; phage(gi198449294)  5e-68  Click
19 complement(1745830..1746777)  PHAGE_Burkho_KS10: putative capsid protein; BCAL1577; phage(gi198449293)  4e-179  Click
20 complement(1746828..1747184)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp30; BCAL1578; phage(gi198449292)  8e-60  Click
21 complement(1747230..1748375)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp28; BCAL1579; phage(gi198449290)  0.0  Click
22 complement(1748589..1748987)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp27; BCAL1580; phage(gi198449289)  1e-71  Click
23 complement(1748984..1749424)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp26; BCAL1581; phage(gi198449288)  6e-79  Click
24 complement(1749426..1749746)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp25; BCAL1582; phage(gi198449287)  6e-57  Click
25 complement(1749746..1749913)  hypothetical protein; BCAL1583  N/A  Click
26 complement(1749910..1750743)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp24; BCAL1584; phage(gi198449286)  4e-161  Click
27 complement(1750820..1751092)  PHAGE_Burkho_KS10: DNA binding protein HU-beta; BCAL1585; phage(gi198449285)  4e-43  Click
28 complement(1751155..1751547)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp22; BCAL1586; phage(gi198449284)  2e-73  Click
29 complement(1751558..1752184)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; BCAL1587; phage(gi198449283)  1e-113  Click
30 complement(1752181..1752768)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp20; BCAL1588; phage(gi198449282)  8e-95  Click
31 complement(1752755..1753060)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp19; BCAL1589; phage(gi198449281)  2e-51  Click
32 complement(1753057..1753245)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp18; BCAL1590; phage(gi198449280)  5e-30  Click
33 complement(1753253..1754245)  PHAGE_Burkho_KS10: putative transposition protein; BCAL1591; phage(gi198449279)  0.0  Click
34 complement(1754255..1755880)  PHAGE_Burkho_KS10: putative transposase; BCAL1592; phage(gi198449278)  0.0  Click
35 complement(1755920..1756972)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp15; BCAL1593; phage(gi198449277)  0.0  Click
36 complement(1756969..1757184)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp14; BCAL1594; phage(gi198449276)  5e-31  Click
37 1757242..1757712  PHAGE_Burkho_KS10: hypothetical protein KS10_gp13; BCAL1595; phage(gi198449275)  4e-83  Click
38 1757767..1758300  PHAGE_Burkho_KS10: hypothetical protein KS10_gp12; BCAL1596; phage(gi198449274)  5e-97  Click
39 1758293..1758901  PHAGE_Burkho_KS10: hypothetical protein KS10_gp11; BCAL1597; phage(gi198449273)  6e-114  Click
40 1759043..1759417  PHAGE_Burkho_KS10: hypothetical protein KS10_gp10; BCAL1598; phage(gi198449272)  2e-65  Click
41 1759414..1760085  PHAGE_Burkho_KS10: putative endolysin; BCAL1599; phage(gi198449271)  8e-129  Click
42 1760082..1760543  hypothetical protein; BCAL1599a  N/A  Click
43 1760648..1760872  PHAGE_Burkho_KS10: hypothetical protein KS10_gp07; BCAL1599b; phage(gi198449269)  2e-39  Click
44 1760869..1761159  PHAGE_Burkho_KS10: hypothetical protein KS10_gp06; BCAL1601; phage(gi198449268)  4e-49  Click
45 1761163..1761660  PHAGE_Burkho_KS10: hypothetical protein KS10_gp05; BCAL1602; phage(gi198449267)  7e-90  Click
46 1761667..1763283  PHAGE_Burkho_KS10: hypothetical protein KS10_gp04; BCAL1603; phage(gi198449266)  0.0  Click
47 1763273..1764808  PHAGE_Burkho_KS10: hypothetical protein KS10_gp03; BCAL1604; phage(gi198449265)  0.0  Click
48 1764853..1765113  PHAGE_Burkho_KS10: hypothetical protein KS10_gp02; BCAL1605; phage(gi198449264)  9e-42  Click
49 1765114..1766346  PHAGE_Burkho_KS10: MuF-like protein; BCAL1606; phage(gi198449263)  0.0  Click
Region 5, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3241582..3241593  attL    CCACCAAATTCC  N/A  Click
2 3241751..3242995  PHAGE_Stenot_S1: putative integrase; BCAL2961; phage(gi213163927)  2e-124  Click
3 complement(3243094..3243792)  hypothetical protein; BCAL2962  N/A  Click
4 3244061..3244363  hypothetical protein; BCAL2962a  N/A  Click
5 3244347..3245321  hypothetical protein; BCAL2962b  N/A  Click
6 3245525..3245782  putative phage-related DNA-binding protein; BCAL2963  N/A  Click
7 3245786..3246499  PHAGE_Pseudo_D3: Orf11; BCAL2964; phage(gi9635595)  3e-27  Click
8 3246496..3246786  hypothetical protein; BCAL2965  N/A  Click
9 3247080..3247280  hypothetical protein; BCAL2965a  N/A  Click
10 3247273..3247512  hypothetical protein; BCAL2965b  N/A  Click
11 3247505..3247780  PHAGE_Burkho_Bcep176: gp21; BCAL2965C; phage(gi77864646)  5e-12  Click
12 3247823..3248131  hypothetical protein; BCAL2965D  N/A  Click
13 3248128..3250932  PHAGE_Entero_P4: DNA primase; BCAL2966; phage(gi9627512)  4e-19  Click
14 3251161..3251499  hypothetical protein; BCAL2967  N/A  Click
15 3251514..3251723  hypothetical protein; BCAL2968  N/A  Click
16 3251740..3252765  PHAGE_Aggreg_S1249: hypothetical protein; BCAL2969; phage(gi273809551)  5e-33  Click
17 complement(3252756..3253013)  hypothetical protein; BCAL2969a  N/A  Click
18 3253166..3253876  PHAGE_Haemop_Aaphi23: putative baseplate protein; BCAL2970; phage(gi31544048)  1e-22  Click
19 3256597..3256608  attR    CCACCAAATTCC  N/A  Click