| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1232656..1232668 | attL AAAAAAGATGAAA | N/A | Click |
| 2 | 1237989..1238606 | PHAGE_Aggreg_S1249: putative integrase; OTT_1207; phage(gi273809608) | 4e-06 | Click |
| 3 | 1238585..1238908 | PHAGE_Lactob_1: integrase; OTT_1208; phage(gi219563220) | 2e-06 | Click |
| 4 | 1238966..1239289 | hypothetical protein; OTT_1209 | N/A | Click |
| 5 | 1239289..1239681 | putative conjugative transfer protein TraE; OTT_1210 | N/A | Click |
| 6 | 1239839..1240165 | hypothetical protein; OTT_1211 | N/A | Click |
| 7 | 1240201..1240212 | attL TTTTTATAAATC | N/A | Click |
| 8 | 1240305..1240472 | TPR repeat-containing protein 06_01; OTT_1212 | N/A | Click |
| 9 | 1240525..1240677 | hypothetical protein; OTT_1213 | N/A | Click |
| 10 | 1240737..1240952 | TPR repeat-containing protein 02_02; OTT_1214 | N/A | Click |
| 11 | 1243046..1247572 | PHAGE_Equid__1: envelope glycoprotein J; OTT_1215; phage(gi50313312) | 5e-08 | Click |
| 12 | complement(1248560..1248736) | hypothetical protein; OTT_1216 | N/A | Click |
| 13 | complement(1248991..1249197) | putative integrase; OTT_1217 | N/A | Click |
| 14 | 1250324..1250337 | attL AAATTCGATCAGAT | N/A | Click |
| 15 | 1250403..1250816 | PROPHAGE_Strept_2603V/R: IS1381 transposase protein A; OTT_1218; phage(gi22537126) | 9e-12 | Click |
| 16 | 1250770..1250967 | PROPHAGE_Strept_2603V/R: IS1381 transposase protein B; OTT_1219; phage(gi22537127) | 9e-05 | Click |
| 17 | 1252352..1252975 | PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; OTT_1220; phage(gi28876155) | 1e-33 | Click |
| 18 | 1253200..1253775 | PHAGE_Aggreg_S1249: metal dependent phosphohydrolase, HD region; OTT_1221; phage(gi273809566) | 2e-07 | Click |
| 19 | 1254514..1256664 | PHAGE_Glossi_virus: hypothetical protein SGHV062; OTT_1222; phage(gi168804078) | 1e-07 | Click |
| 20 | 1257316..1258101 | PHAGE_Cafete_BV_PW1: putative apurinic-apyrimidinic endonuclease 1; OTT_1223; phage(gi310831095) | 3e-18 | Click |
| 21 | complement(1258143..1258598) | putative conjugative transfer protein TraD; OTT_1224 | N/A | Click |
| 22 | 1258894..1259850 | putative conjugative transfer protein TraA; OTT_1225 | N/A | Click |
| 23 | complement(1259955..1260425) | peroxiredoxin, AhpC/TSA family protein; OTT_1226 | N/A | Click |
| 24 | complement(1260428..1261567) | PHAGE_Pseudo_vB_PaeS_PMG1: integrase; OTT_1227; phage(gi374531680) | 6e-23 | Click |
| 25 | 1262400..1262413 | attR AAATTCGATCAGAT | N/A | Click |
| 26 | 1274733..1274744 | attR TTTTTATAAATC | N/A | Click |
| 27 | 1274803..1274815 | attR AAAAAAGATGAAA | N/A | Click |
Region 2, total : 24 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1543584..1543598 | attL ATAATTTTGAACTAC | N/A | Click |
| 2 | 1543640..1543651 | attL TAAGATTAATTC | N/A | Click |
| 3 | 1544527..1544640 | putative integrase; OTT_1514 | N/A | Click |
| 4 | 1545218..1546111 | putative lipase LipB; OTT_1515 | N/A | Click |
| 5 | 1546398..1546410 | attL ATACATTACATTA | N/A | Click |
| 6 | complement(1546680..1546940) | putative integrase; OTT_1516 | N/A | Click |
| 7 | complement(1548337..1548555) | reverse transcriptase; OTT_1517 | N/A | Click |
| 8 | complement(1548914..1549132) | ankyrin repeat-containing protein 18; OTT_1518 | N/A | Click |
| 9 | complement(1549361..1549852) | PHAGE_Acanth_mimivirus: putative ankyrin repeat protein; OTT_1519; phage(gi311977464) | 2e-15 | Click |
| 10 | complement(1550311..1550709) | putative conjugative transfer protein TraI; OTT_1520 | N/A | Click |
| 11 | 1550821..1551489 | hypothetical protein; OTT_1521 | N/A | Click |
| 12 | 1551677..1551689 | attR ATACATTACATTA | N/A | Click |
| 13 | complement(1551687..1552484) | putative conjugative transfer protein TraA; OTT_1522 | N/A | Click |
| 14 | complement(1552499..1553641) | PHAGE_Lactoc_949: putative exodeoxyribonuclease; OTT_1523; phage(gi327197845) | 2e-13 | Click |
| 15 | complement(1553709..1553843) | putative conjugative transfer protein TraA; OTT_1524 | N/A | Click |
| 16 | 1554140..1554604 | putative conjugative transfer protein TraD; OTT_1525 | N/A | Click |
| 17 | complement(1554608..1556173) | PHAGE_Acanth_moumouvirus: ankyrin repeat protein; OTT_1526; phage(gi441432050) | 2e-07 | Click |
| 18 | complement(1556883..1557215) | PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; OTT_1527; phage(gi28876155) | 9e-21 | Click |
| 19 | complement(1557279..1558121) | hypothetical protein; OTT_1528 | N/A | Click |
| 20 | complement(1558097..1558480) | hypothetical protein; OTT_1529 | N/A | Click |
| 21 | 1558960..1559202 | PROPHAGE_Strept_2603V/R: IS1381 transposase protein A; OTT_1530; phage(gi22537126) | 1e-14 | Click |
| 22 | 1559281..1559457 | transposase; OTT_1531 | N/A | Click |
| 23 | 1559621..1559806 | PROPHAGE_Strept_2603V/R: IS1381 transposase protein B; OTT_1532; phage(gi22537127) | 5e-09 | Click |
| 24 | complement(1560448..1561383) | PHAGE_Bordet_1: reverse transcriptase; OTT_1533; phage(gi45569499) | 2e-06 | Click |
| 25 | 1561630..1562598 | PROPHAGE_Shewan_MR-1: IS110 family transposase; OTT_1534; phage(gi24375433) | 3e-11 | Click |
| 26 | complement(1562614..1562832) | reverse transcriptase; OTT_1535 | N/A | Click |
| 27 | 1562816..1563256 | hypothetical protein; OTT_1536 | N/A | Click |
| 28 | 1563287..1563298 | attR TAAGATTAATTC | N/A | Click |
| 29 | complement(1563657..1564679) | PROPHAGE_Escher_CFT073: P4 family integrase; OTT_1537; phage(gi26248244) | 1e-12 | Click |
| 30 | 1570567..1570581 | attR ATAATTTTGAACTAC | N/A | Click |