Definition Clostridium botulinum E3 str. Alaska E43, complete genome.
Accession NC_010723
Length 3,659,644
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 134781..134793  attL    AAAATTATTTGAA  N/A  Click
2 147624..148220  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp45; CLH_0124; phage(gi122891829)  3e-16  Click
3 148239..149084  PHAGE_Staphy_phiETA3: major capsid protein; CLH_0125; phage(gi122891830)  2e-32  Click
4 149149..149556  hypothetical protein; CLH_0126  N/A  Click
5 149558..149803  hypothetical protein; CLH_0127  N/A  Click
6 complement(149835..150353)  PHAGE_Clostr_PhiS63: gp36; CLH_0128; phage(gi388570662)  9e-06  Click
7 150549..150740  hypothetical protein; CLH_0129  N/A  Click
8 150758..152896  PHAGE_Strept_2: primase; CLH_0130; phage(gi273809764)  1e-23  Click
9 152920..153180  hypothetical protein; CLH_0131  N/A  Click
10 153390..153707  hypothetical protein; CLH_0132  N/A  Click
11 153533..153545  attR    AAAATTATTTGAA  N/A  Click
12 153822..154991  PHAGE_Bacill_phIS3501: phage integrase; CLH_0133; phage(gi422934298)  5e-31  Click
13 complement(155357..156751)  PHAGE_Acanth_moumouvirus: asparaginyl t-RNA synthetase; CLH_0134; phage(gi441432571)  2e-90  Click
Region 2, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 915697..916821  PHAGE_Cyanop_KBS_S_2A: RNA polymerase sigma factor RpoD; CLH_0881; phage(gi472341467)  2e-39  Click
2 916914..917600  Bcl-2 family protein; CLH_0882  N/A  Click
3 917718..918509  hypothetical protein; CLH_0883  N/A  Click
4 918566..918802  hypothetical protein; CLH_0884  N/A  Click
5 complement(919288..919749)  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp43; CLH_0885; phage(gi209901280)  2e-31  Click
6 complement(919767..920132)  PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; CLH_0886; phage(gi397912660)  1e-07  Click
7 920387..920896  PHAGE_Clostr_PhiS63: gp40; CLH_0887; phage(gi388570666)  1e-36  Click
8 921657..922073  PHAGE_Strept_1: hypothetical protein EJ-1p51; CLH_0888; phage(gi39653725)  7e-07  Click
9 922063..922218  hypothetical protein; CLH_0889  N/A  Click
10 922219..923529  PHAGE_Strept_1: sheath tail protein; CLH_0890; phage(gi39653727)  5e-103  Click
11 923548..924015  PHAGE_Strept_1: core tail protein; CLH_0891; phage(gi39653728)  6e-42  Click
12 924315..924728  PHAGE_Strept_1: hypothetical protein EJ-1p55; CLH_0892; phage(gi39653729)  9e-14  Click
13 924924..926873  PHAGE_Strept_1: tail length tape measure protein; CLH_0893; phage(gi39653730)  9e-23  Click
14 926873..927535  PHAGE_Strept_1: hypothetical protein EJ-1p57; CLH_0894; phage(gi39653731)  7e-13  Click
15 927547..928518  PHAGE_Strept_1: hypothetical protein EJ-1p58; CLH_0895; phage(gi39653732)  2e-41  Click
16 928522..928851  PHAGE_Clostr_phiC2: hypothetical protein phiC2p23; CLH_0896; phage(gi134287358)  2e-07  Click
17 928844..929251  PHAGE_Strept_1: hypothetical protein EJ-1p60; CLH_0897; phage(gi39653734)  3e-17  Click
18 929254..930312  PHAGE_Strept_1: tail protein; CLH_0898; phage(gi39653735)  4e-32  Click
19 930313..932394  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; CLH_0899; phage(gi9631364)  2e-15  Click
20 932396..933010  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp28; CLH_0900; phage(gi90592664)  5e-19  Click
21 933025..933825  hypothetical protein; CLH_0901  N/A  Click
22 933842..934177  hypothetical protein; CLH_0902  N/A  Click
23 934170..934304  phage protein, XkdX family; CLH_0903  N/A  Click
24 934418..934618  UviB homologous protein; CLH_0904  N/A  Click
25 934757..935551  PHAGE_Clostr_PhiS63: gp21; CLH_0905; phage(gi388570650)  2e-37  Click
26 935699..935863  surface lipoprotein-related protein; CLH_0906  N/A  Click
27 complement(935886..936452)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p012; CLH_0907; phage(gi9630137)  1e-06  Click
28 936819..937865  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p028; CLH_0908; phage(gi9630153)  5e-10  Click
29 937884..938921  hypothetical protein; CLH_0909  N/A  Click
30 939071..940180  PHAGE_Plankt_PaV_LD: ABC transporter; CLH_0910; phage(gi371496158)  3e-23  Click
31 940202..941143  PHAGE_Megavi_lba: hypothetical protein; CLH_0911; phage(gi448825526)  9e-05  Click
Region 3, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1841947..1841959  attL    AATATATTTATAA  N/A  Click
2 complement(1846045..1847034)  PHAGE_Thermu_26: phage XerD-like integrase; CLH_1697; phage(gi157265417)  3e-10  Click
3 1847705..1848184  YbaK/ebsC protein; CLH_1698  N/A  Click
4 complement(1848507..1849877)  (dimethylallyl)adenosine tRNA methylthiotransferase; CLH_1699  N/A  Click
5 complement(1850114..1850326)  PHAGE_Bacill_SPBc2: putative SPbeta phage repressor; CLH_1700; phage(gi9630190)  2e-05  Click
6 complement(1850836..1851624)  PHAGE_Pseudo_PAJU2: putative endolysin; CLH_1701; phage(gi209552446)  8e-18  Click
7 complement(1851682..1851855)  hypothetical protein; CLH_1702  N/A  Click
8 complement(1851868..1852068)  UviB homologous protein; CLH_1703  N/A  Click
9 complement(1852141..1853145)  PHAGE_Pseudo_phiIBB_PF7A: minor capsid protein 10B; CLH_1704; phage(gi326536940)  8e-08  Click
10 complement(1853192..1854715)  PHAGE_Cronob_phiES15: putative major tail protein; CLH_1705; phage(gi401817602)  2e-06  Click
11 complement(1855188..1855385)  hypothetical protein; CLH_1706  N/A  Click
12 complement(1855398..1855736)  PHAGE_Antica_nucleopolyhedrovirus: pe38 like protein; CLH_1707; phage(gi116326217)  4e-05  Click
13 complement(1855752..1857161)  PHAGE_Clostr_phiMMP04: tail fiber; CLH_1708; phage(gi414090463)  2e-48  Click
14 complement(1857161..1857823)  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; CLH_1709; phage(gi169936031)  1e-13  Click
15 complement(1857823..1858974)  PHAGE_Burkho_BcepMu: gp50; CLH_1710; phage(gi48696960)  4e-28  Click
16 complement(1858967..1859287)  putative GPW/gp25 family protein; CLH_1711  N/A  Click
17 complement(1859290..1859832)  hypothetical protein; CLH_1712  N/A  Click
18 complement(1859837..1860037)  putative phage baseplate assembly protein V; CLH_1713  N/A  Click
19 complement(1860037..1860945)  PHAGE_Burkho_BcepMu: gp47; CLH_1714; phage(gi48696957)  2e-05  Click
20 complement(1860961..1861173)  hypothetical protein; CLH_1715  N/A  Click
21 complement(1861166..1863364)  PHAGE_Clostr_phiCP13O: phage-related minor tail protein; CLH_1716; phage(gi422935081)  1e-54  Click
22 complement(1863530..1863853)  hypothetical protein; CLH_1717  N/A  Click
23 complement(1863923..1864444)  PHAGE_Burkho_BcepMu: gp40; CLH_1718; phage(gi48696950)  7e-09  Click
24 complement(1864444..1865880)  PHAGE_Burkho_BcepMu: gp39; CLH_1719; phage(gi48696949)  2e-17  Click
25 1880079..1880091  attR    AATATATTTATAA  N/A  Click
Region 4, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1863620..1863631  attL    TCTTTTTACATC  N/A  Click
2 complement(1868967..1870100)  PHAGE_Geobac_E2: putative Clp peptidase; CLH_1726; phage(gi148747731)  3e-36  Click
3 complement(1870180..1871739)  PHAGE_Synech_S_CBS3: lambda-like phage portal protein; CLH_1727; phage(gi331028010)  5e-40  Click
4 complement(1871750..1871983)  hypothetical protein; CLH_1728  N/A  Click
5 complement(1871999..1873111)  PHAGE_Synech_S_CBS3: large terminase subunit; CLH_1729; phage(gi331028008)  1e-42  Click
6 complement(1873313..1873819)  PHAGE_Synech_S_CBS3: large terminase subunit; CLH_1730; phage(gi331028008)  9e-32  Click
7 complement(1873797..1874390)  hypothetical protein; CLH_1731  N/A  Click
8 complement(1874657..1875013)  hypothetical protein; CLH_1732  N/A  Click
9 1874843..1874854  attR    TCTTTTTACATC  N/A  Click
10 complement(1875198..1875782)  PHAGE_Clostr_phiCD6356: putative site-specific recombinase; CLH_1733; phage(gi326536904)  1e-39  Click
11 complement(1875779..1876006)  hypothetical protein; CLH_1734  N/A  Click
12 complement(1876061..1876432)  PHAGE_Clostr_PhiS63: gp22; CLH_1735; phage(gi388570651)  3e-29  Click
Region 5, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2264698..2265576)  PHAGE_Parame_1: 6mA DNA methylase M.CviAI; CLH_2099; phage(gi9632131)  2e-12  Click
2 2265581..2265594  attL    AAAATCCTCCTTAA  N/A  Click
3 complement(2265638..2267227)  hypothetical protein; CLH_2100  N/A  Click
4 complement(2267480..2268154)  PHAGE_Clostr_phiCPV4: N-acetylmuramoyl-L-alanine amidase; CLH_2101; phage(gi392972663)  4e-25  Click
5 complement(2268216..2268632)  PHAGE_Clostr_phiCTP1: predicted holin; CLH_2102; phage(gi304360690)  3e-31  Click
6 complement(2268732..2268956)  hypothetical protein; CLH_2103  N/A  Click
7 complement(2269044..2269358)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p040; CLH_2104; phage(gi9630165)  9e-05  Click
8 complement(2269372..2270889)  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; CLH_2105; phage(gi9631364)  1e-07  Click
9 complement(2270908..2272653)  PHAGE_Lister_2389: Gp14 protein; CLH_2106; phage(gi17488517)  4e-18  Click
10 complement(2272650..2273324)  PHAGE_Clostr_phiCD38_2: tail component protein; CLH_2107; phage(gi333798124)  2e-15  Click
11 complement(2273340..2276810)  PHAGE_Clostr_phiCP26F: phage tail tape measure protein; CLH_2108; phage(gi422933964)  2e-103  Click
12 complement(2276860..2277123)  hypothetical protein; CLH_2109  N/A  Click
13 complement(2277126..2277449)  hypothetical protein; CLH_2110  N/A  Click
14 complement(2277452..2278033)  hypothetical protein; CLH_2111  N/A  Click
15 complement(2278036..2278356)  PHAGE_Lactoc_bIL285: Orf49; CLH_2112; phage(gi13095729)  2e-12  Click
16 complement(2278349..2278738)  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp010; CLH_2113; phage(gi148747737)  5e-12  Click
17 complement(2278738..2279073)  hypothetical protein; CLH_2114  N/A  Click
18 complement(2279048..2279377)  PHAGE_Lister_2389: Gp6 protein; CLH_2115; phage(gi17488509)  1e-14  Click
19 complement(2279392..2280588)  PHAGE_Lister_2389: major capsid protein a; CLH_2116; phage(gi17488508)  5e-65  Click
20 complement(2280588..2281379)  PHAGE_Lister_2389: Clp protease; CLH_2117; phage(gi17488507)  2e-33  Click
21 complement(2281381..2282529)  PHAGE_Lister_2389: hypothetical protein 2389gp03; CLH_2118; phage(gi17488506)  5e-53  Click
22 complement(2282578..2284233)  PHAGE_Lister_2389: terminase large subunit; CLH_2119; phage(gi17488505)  4e-119  Click
23 complement(2284214..2284768)  PHAGE_Lister_2389: terminase small subunit; CLH_2120; phage(gi17488504)  3e-09  Click
24 complement(2284871..2285197)  PHAGE_Lister_2389: Gp54 protein; CLH_2121; phage(gi17488559)  9e-19  Click
25 complement(2285185..2285502)  PHAGE_Strept_Dp_1: hypothetical protein; CLH_2122; phage(gi327198353)  3e-05  Click
26 2285550..2285563  attR    AAAATCCTCCTTAA  N/A  Click
27 complement(2285656..2286198)  PHAGE_Clostr_phiCD6356: putative site-specific recombinase; CLH_2123; phage(gi326536904)  2e-51  Click