Definition | Xanthomonas campestris pv. campestris str. B100, complete genome. |
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Accession | NC_010688 |
Length | 5,079,002 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 15 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 682291..683985 | PHAGE_Burkho_KS5: gp44; xccb100_0606; phage(gi327198042) | 2e-09 | Click |
2 | 684241..685449 | hypothetical protein; xccb100_0607 | N/A | Click |
3 | 685488..685757 | PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0608; phage(gi21232568) | 3e-46 | Click |
4 | 685838..686572 | PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0609; phage(gi21232569) | 6e-142 | Click |
5 | complement(686599..687432) | PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_0610; phage(gi77747809) | 7e-163 | Click |
6 | complement(687465..687731) | PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_0611; phage(gi21231080) | 3e-45 | Click |
7 | complement(688397..689611) | PROPHAGE_Xantho_33913: IS1481 transposase; xccb100_0612; phage(gi21229606) | 0.0 | Click |
8 | 689886..690152 | PROPHAGE_Xantho_33913: ISxcc1 transposase; xccb100_0613; phage(gi21231059) | 4e-45 | Click |
9 | 690227..690994 | PROPHAGE_Xantho_33913: ISxcC1 transposase; xccb100_0614; phage(gi21231060) | 7e-151 | Click |
10 | 690951..691361 | PHAGE_Pseudo_phiCTX: predicted baseplate; xccb100_0615; phage(gi17313235) | 1e-20 | Click |
11 | complement(691526..692407) | hypothetical protein; xccb100_0616 | N/A | Click |
12 | 692752..693015 | PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0617; phage(gi21232568) | 1e-44 | Click |
13 | 693096..693854 | PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0618; phage(gi21232569) | 1e-144 | Click |
14 | 693940..694833 | hypothetical protein; xccb100_0619 | N/A | Click |
15 | complement(694938..695918) | PHAGE_Burkho_KS5: ISBmu23 transposase; xccb100_0620; phage(gi327198044) | 4e-91 | Click |
Region 2, total : 10 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2746917..2746932 | attL CGGTGTGGATCAGATC | N/A | Click |
2 | complement(2759295..2762255) | PROPHAGE_Xantho_33913: Tn5041 transposase; xccb100_2368; phage(gi21231545) | 3e-89 | Click |
3 | complement(2762264..2763232) | Integrase-like protein; xccb100_2369 | N/A | Click |
4 | 2763416..2764471 | PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; xccb100_2370; phage(gi428782750) | 5e-08 | Click |
5 | 2764795..2765070 | hypothetical protein; xccb100_2371 | N/A | Click |
6 | complement(2765067..2767364) | PHAGE_Entero_EPS7: putative phage tail protein; xccb100_2372; phage(gi182682945) | 1e-08 | Click |
7 | complement(2768031..2768204) | hypothetical peptide; xccb100_2373 | N/A | Click |
8 | complement(2768223..2768513) | hypothetical protein; xccb100_2374 | N/A | Click |
9 | complement(2768504..2768728) | hypothetical protein; xccb100_2375 | N/A | Click |
10 | complement(2769075..2769797) | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p3; xccb100_2376; phage(gi70727681) | 6e-05 | Click |
11 | complement(2769846..2770496) | PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp5; xccb100_2377; phage(gi17975752) | 8e-54 | Click |
12 | 2784947..2784962 | attR CGGTGTGGATCAGATC | N/A | Click |
Region 3, total : 29 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3232045..3232057 | attL ATATAAAAAAGCT | N/A | Click |
2 | complement(3236495..3237643) | PROPHAGE_Xantho_33913: phage-related integrase; xccb100_2818; phage(gi77747810) | 0.0 | Click |
3 | 3237928..3239460 | PROPHAGE_Xantho_306: phage-related integrase; xccb100_2819; phage(gi21242262) | 0.0 | Click |
4 | 3239477..3241360 | hypothetical protein; xccb100_2820 | N/A | Click |
5 | 3241418..3242386 | hypothetical protein; xccb100_2821 | N/A | Click |
6 | complement(3242379..3242636) | hypothetical protein; xccb100_2822 | N/A | Click |
7 | 3242635..3242901 | PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_2823; phage(gi21231080) | 3e-45 | Click |
8 | 3242934..3243767 | PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_2824; phage(gi77747809) | 3e-162 | Click |
9 | 3243836..3243848 | attR ATATAAAAAAGCT | N/A | Click |
10 | complement(3243901..3245526) | plasmid mobilization protein; xccb100_2825 | N/A | Click |
11 | 3245950..3246765 | hypothetical protein; xccb100_2826 | N/A | Click |
12 | complement(3246932..3248518) | PHAGE_Geobac_GBSV1: N-acetylmuramoyl-L-alanine amidase; xccb100_2827; phage(gi115334645) | 8e-05 | Click |
13 | complement(3248774..3249016) | predicted transcriptional regulator; xccb100_2828 | N/A | Click |
14 | 3249242..3249553 | hypothetical protein; xccb100_2829 | N/A | Click |
15 | 3249593..3249985 | exported protein; xccb100_2830 | N/A | Click |
16 | complement(3250050..3250772) | hypothetical protein; xccb100_2831 | N/A | Click |
17 | 3250909..3251133 | hypothetical protein; xccb100_2832 | N/A | Click |
18 | complement(3251440..3252198) | PROPHAGE_Xantho_33913: ISxcC1 transposase; xccb100_2833; phage(gi21230085) | 2e-147 | Click |
19 | complement(3252282..3252548) | PROPHAGE_Xantho_33913: ISxcc1 transposase; xccb100_2834; phage(gi21232566) | 4e-43 | Click |
20 | 3252805..3253131 | hypothetical protein; xccb100_2835 | N/A | Click |
21 | complement(3253160..3254014) | PROPHAGE_Xantho_33913: ISxac3 transposase; xccb100_2836; phage(gi21231086) | 6e-163 | Click |
22 | complement(3254032..3254325) | PROPHAGE_Xantho_33913: ISxac3 transposase; xccb100_2837; phage(gi21231087) | 1e-45 | Click |
23 | 3254413..3255393 | PROPHAGE_Xantho_33913: IS1479 transposase; xccb100_2838; phage(gi21229605) | 0.0 | Click |
24 | 3255568..3256026 | hypothetical protein; xccb100_2839 | N/A | Click |
25 | 3256023..3256493 | hypothetical protein; xccb100_2840 | N/A | Click |
26 | complement(3256756..3257274) | PROPHAGE_Xantho_33913: IS1480 transposase; xccb100_2841; phage(gi21231089) | 5e-95 | Click |
27 | complement(3257174..3257554) | IS1480b transposase; xccb100_2842 | N/A | Click |
28 | 3257836..3258591 | hypothetical protein; xccb100_2843 | N/A | Click |
29 | 3258636..3259133 | PHAGE_Erethi_1: minor capsid protein; xccb100_2844; phage(gi62362152) | 2e-06 | Click |
30 | complement(3259481..3259702) | hypothetical protein; xccb100_2845 | N/A | Click |
31 | complement(3259887..3260645) | PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_2846; phage(gi21232569) | 8e-147 | Click |