Definition Xanthomonas campestris pv. campestris str. B100, complete genome.
Accession NC_010688
Length 5,079,002
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 15 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 682291..683985  PHAGE_Burkho_KS5: gp44; xccb100_0606; phage(gi327198042)  2e-09  Click
2 684241..685449  hypothetical protein; xccb100_0607  N/A  Click
3 685488..685757  PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0608; phage(gi21232568)  3e-46  Click
4 685838..686572  PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0609; phage(gi21232569)  6e-142  Click
5 complement(686599..687432)  PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_0610; phage(gi77747809)  7e-163  Click
6 complement(687465..687731)  PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_0611; phage(gi21231080)  3e-45  Click
7 complement(688397..689611)  PROPHAGE_Xantho_33913: IS1481 transposase; xccb100_0612; phage(gi21229606)  0.0  Click
8 689886..690152  PROPHAGE_Xantho_33913: ISxcc1 transposase; xccb100_0613; phage(gi21231059)  4e-45  Click
9 690227..690994  PROPHAGE_Xantho_33913: ISxcC1 transposase; xccb100_0614; phage(gi21231060)  7e-151  Click
10 690951..691361  PHAGE_Pseudo_phiCTX: predicted baseplate; xccb100_0615; phage(gi17313235)  1e-20  Click
11 complement(691526..692407)  hypothetical protein; xccb100_0616  N/A  Click
12 692752..693015  PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0617; phage(gi21232568)  1e-44  Click
13 693096..693854  PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_0618; phage(gi21232569)  1e-144  Click
14 693940..694833  hypothetical protein; xccb100_0619  N/A  Click
15 complement(694938..695918)  PHAGE_Burkho_KS5: ISBmu23 transposase; xccb100_0620; phage(gi327198044)  4e-91  Click
Region 2, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2746917..2746932  attL    CGGTGTGGATCAGATC  N/A  Click
2 complement(2759295..2762255)  PROPHAGE_Xantho_33913: Tn5041 transposase; xccb100_2368; phage(gi21231545)  3e-89  Click
3 complement(2762264..2763232)  Integrase-like protein; xccb100_2369  N/A  Click
4 2763416..2764471  PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; xccb100_2370; phage(gi428782750)  5e-08  Click
5 2764795..2765070  hypothetical protein; xccb100_2371  N/A  Click
6 complement(2765067..2767364)  PHAGE_Entero_EPS7: putative phage tail protein; xccb100_2372; phage(gi182682945)  1e-08  Click
7 complement(2768031..2768204)  hypothetical peptide; xccb100_2373  N/A  Click
8 complement(2768223..2768513)  hypothetical protein; xccb100_2374  N/A  Click
9 complement(2768504..2768728)  hypothetical protein; xccb100_2375  N/A  Click
10 complement(2769075..2769797)  PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p3; xccb100_2376; phage(gi70727681)  6e-05  Click
11 complement(2769846..2770496)  PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp5; xccb100_2377; phage(gi17975752)  8e-54  Click
12 2784947..2784962  attR    CGGTGTGGATCAGATC  N/A  Click
Region 3, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3232045..3232057  attL    ATATAAAAAAGCT  N/A  Click
2 complement(3236495..3237643)  PROPHAGE_Xantho_33913: phage-related integrase; xccb100_2818; phage(gi77747810)  0.0  Click
3 3237928..3239460  PROPHAGE_Xantho_306: phage-related integrase; xccb100_2819; phage(gi21242262)  0.0  Click
4 3239477..3241360  hypothetical protein; xccb100_2820  N/A  Click
5 3241418..3242386  hypothetical protein; xccb100_2821  N/A  Click
6 complement(3242379..3242636)  hypothetical protein; xccb100_2822  N/A  Click
7 3242635..3242901  PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_2823; phage(gi21231080)  3e-45  Click
8 3242934..3243767  PROPHAGE_Xantho_33913: IS1477 transposase; xccb100_2824; phage(gi77747809)  3e-162  Click
9 3243836..3243848  attR    ATATAAAAAAGCT  N/A  Click
10 complement(3243901..3245526)  plasmid mobilization protein; xccb100_2825  N/A  Click
11 3245950..3246765  hypothetical protein; xccb100_2826  N/A  Click
12 complement(3246932..3248518)  PHAGE_Geobac_GBSV1: N-acetylmuramoyl-L-alanine amidase; xccb100_2827; phage(gi115334645)  8e-05  Click
13 complement(3248774..3249016)  predicted transcriptional regulator; xccb100_2828  N/A  Click
14 3249242..3249553  hypothetical protein; xccb100_2829  N/A  Click
15 3249593..3249985  exported protein; xccb100_2830  N/A  Click
16 complement(3250050..3250772)  hypothetical protein; xccb100_2831  N/A  Click
17 3250909..3251133  hypothetical protein; xccb100_2832  N/A  Click
18 complement(3251440..3252198)  PROPHAGE_Xantho_33913: ISxcC1 transposase; xccb100_2833; phage(gi21230085)  2e-147  Click
19 complement(3252282..3252548)  PROPHAGE_Xantho_33913: ISxcc1 transposase; xccb100_2834; phage(gi21232566)  4e-43  Click
20 3252805..3253131  hypothetical protein; xccb100_2835  N/A  Click
21 complement(3253160..3254014)  PROPHAGE_Xantho_33913: ISxac3 transposase; xccb100_2836; phage(gi21231086)  6e-163  Click
22 complement(3254032..3254325)  PROPHAGE_Xantho_33913: ISxac3 transposase; xccb100_2837; phage(gi21231087)  1e-45  Click
23 3254413..3255393  PROPHAGE_Xantho_33913: IS1479 transposase; xccb100_2838; phage(gi21229605)  0.0  Click
24 3255568..3256026  hypothetical protein; xccb100_2839  N/A  Click
25 3256023..3256493  hypothetical protein; xccb100_2840  N/A  Click
26 complement(3256756..3257274)  PROPHAGE_Xantho_33913: IS1480 transposase; xccb100_2841; phage(gi21231089)  5e-95  Click
27 complement(3257174..3257554)  IS1480b transposase; xccb100_2842  N/A  Click
28 3257836..3258591  hypothetical protein; xccb100_2843  N/A  Click
29 3258636..3259133  PHAGE_Erethi_1: minor capsid protein; xccb100_2844; phage(gi62362152)  2e-06  Click
30 complement(3259481..3259702)  hypothetical protein; xccb100_2845  N/A  Click
31 complement(3259887..3260645)  PROPHAGE_Xantho_33913: IS1404 transposase; xccb100_2846; phage(gi21232569)  8e-147  Click