Definition Bordetella avium 197N chromosome, complete genome.
Accession NC_010645
Length 3,732,255
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 30 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(414160..415113)  PHAGE_Rhodob_RcapMu: c-repressor; BAV0410; phage(gi356870844)  2e-12  Click
2 complement(415990..416280)  hypothetical protein; BAV0411  N/A  Click
3 416468..416932  hypothetical protein; BAV0412  N/A  Click
4 416929..417180  PHAGE_Burkho_BcepMigl: hypothetical protein; BAV0412A; phage(gi431809873)  6e-09  Click
5 417177..418001  PHAGE_Thalas_BA3: hypothetical protein BA3_0036; BAV0413; phage(gi160700630)  8e-23  Click
6 417988..418686  hypothetical protein; BAV0414  N/A  Click
7 418683..419054  PHAGE_Sulfit_pCB2047_A: hypothetical protein; BAV0415; phage(gi472341907)  4e-09  Click
8 419215..419481  PHAGE_Bordet_1: hypothetical protein BMP-1p26; BAV0416; phage(gi45569520)  5e-30  Click
9 419563..420075  PHAGE_Bordet_1: hypothetical protein BMP-1p25; BAV0417; phage(gi45569519)  8e-76  Click
10 420075..421613  PHAGE_Bordet_1: hypothetical protein BMP-1p24; BAV0418; phage(gi45569518)  0.0  Click
11 421618..422121  PHAGE_Bordet_1: hypothetical protein BMP-1p23; BAV0419; phage(gi45569517)  3e-78  Click
12 422118..422576  PHAGE_Bordet_1: hypothetical protein BMP-1p22; BAV0420; phage(gi45569516)  2e-72  Click
13 422697..422957  PHAGE_Bordet_1: hypothetical protein BMP-1p21; BAV0421; phage(gi45569515)  9e-26  Click
14 422959..424626  PHAGE_Bordet_1: hypothetical protein BMP-1p20; BAV0422; phage(gi45569514)  0.0  Click
15 424713..425060  PHAGE_Bordet_1: hypothetical protein BMP-1p18; BAV0423; phage(gi45569512)  4e-55  Click
16 425035..425709  PHAGE_Bordet_1: hypothetical protein BMP-1p17; BAV0424; phage(gi45569511)  5e-112  Click
17 425723..426718  PHAGE_Bordet_1: hypothetical protein BMP-1p16; BAV0425; phage(gi45569510)  0.0  Click
18 426737..427159  PHAGE_Bordet_1: hypothetical protein BMP-1p15; BAV0426; phage(gi45569509)  3e-60  Click
19 427172..427372  PHAGE_Bordet_1: hypothetical protein BMP-1p14; BAV0427; phage(gi45569508)  7e-26  Click
20 427447..428118  PHAGE_Bordet_1: hypothetical protein BMP-1p13; BAV0428; phage(gi45569507)  5e-118  Click
21 428118..430163  PHAGE_Bordet_1: hypothetical protein BMP-1p12; BAV0429; phage(gi45569506)  0.0  Click
22 430175..430768  PHAGE_Bordet_1: hypothetical protein BMP-1p11; BAV0430; phage(gi45569505)  6e-37  Click
23 430765..432375  PHAGE_Bordet_1: hypothetical protein BMP-1p10; BAV0431; phage(gi45569504)  1e-17  Click
24 432362..435751  PHAGE_Pelagi_HTVC011P: internal virion protein D; BAV0432; phage(gi460042358)  7e-60  Click
25 435912..437024  PHAGE_Bordet_1: hypothetical protein BMP-1p08; BAV0433; phage(gi45569502)  5e-53  Click
26 437030..437422  PHAGE_Edward_MSW_3: putative tail assembly chaperone; BAV0434; phage(gi448261067)  3e-07  Click
27 437463..438269  hypothetical protein; BAV0435  N/A  Click
28 438274..438489  PHAGE_Yersin_PY54: hypothetical protein PY54p60; BAV0436; phage(gi33770569)  5e-06  Click
29 438489..439040  PHAGE_Xantho_CP1: hypothetical protein; BAV0437; phage(gi431811023)  1e-13  Click
30 complement(439274..440035)  PHAGE_Salmon_vB_SosS_Oslo: putative antirepressor protein Ant; BAV0438; phage(gi399528777)  4e-31  Click
Region 2, total : 78 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1366325..1367362)  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; BAV1273; phage(gi163932195)  3e-06  Click
2 complement(1367359..1368540)  ABC transporter substrate-binding protein; BAV1274  N/A  Click
3 complement(1368740..1369075)  hypothetical protein; BAV1275  N/A  Click
4 complement(1369273..1369932)  Crp family transcriptional regulator; BAV1276  N/A  Click
5 1370302..1370736  PHAGE_Entero_HK022: IS903 transposase; BAV1277; phage(gi9634149)  7e-05  Click
6 1370729..1370920  hypothetical protein; BAV1277A  N/A  Click
7 complement(1370910..1371179)  phage glycoprotein; BAV1278  N/A  Click
8 complement(1371209..1371352)  hypothetical protein; BAV1279  N/A  Click
9 1371555..1371578  attL    TGGTGGAGCCGGGGGGAATTGAAC  N/A  Click
10 complement(1371642..1372889)  PHAGE_Cronob_phiES15: putative integrase; BAV1280; phage(gi401817566)  2e-69  Click
11 complement(1372841..1373044)  PHAGE_Cronob_phiES15: putative excisionase; BAV1281; phage(gi401817567)  2e-05  Click
12 complement(1373076..1373405)  phage protein; BAV1282  N/A  Click
13 complement(1373403..1374436)  PHAGE_Burkho_BcepC6B: putative methyl transferase protein; BAV1283; phage(gi48697223)  5e-104  Click
14 complement(1374440..1374940)  PHAGE_Pectob_ZF40: putative methylase; BAV1284; phage(gi422936660)  1e-54  Click
15 complement(1374941..1375315)  phage protein; BAV1285  N/A  Click
16 complement(1375312..1376244)  phage protein; BAV1286  N/A  Click
17 complement(1376241..1377143)  PHAGE_Vibrio_VHML: ORF10; BAV1287; phage(gi27311176)  3e-41  Click
18 complement(1377522..1378016)  PHAGE_Strept_2: hypothetical protein; BAV1289; phage(gi273809759)  1e-17  Click
19 complement(1378019..1378630)  PHAGE_Escher_TL_2011c: hypothetical protein; BAV1290; phage(gi418487087)  2e-13  Click
20 complement(1378631..1379281)  PHAGE_Entero_HK629: hypothetical protein; BAV1291; phage(gi428782051)  3e-55  Click
21 complement(1379393..1379665)  phage protein; BAV1292  N/A  Click
22 complement(1379766..1380092)  phage protein; BAV1293  N/A  Click
23 complement(1380215..1380288)  tRNA  N/A  Click
24 complement(1380760..1381254)  phage protein; BAV1294  N/A  Click
25 complement(1381381..1381647)  phage protein; BAV1295  N/A  Click
26 complement(1381752..1382471)  phage protein; BAV1296  N/A  Click
27 complement(1382490..1382717)  phage protein; BAV1297  N/A  Click
28 complement(1382739..1383221)  phage membrane protein; BAV1298  N/A  Click
29 complement(1383205..1384161)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p11; BAV1299; phage(gi31544009)  2e-10  Click
30 complement(1384189..1385271)  PHAGE_Rhodob_RcapMu: c-repressor; BAV1300; phage(gi356870844)  1e-12  Click
31 1385535..1385741  phage protein; BAV1301  N/A  Click
32 1385756..1386064  PHAGE_Salmon_SPN3UB: putative CII; BAV1302; phage(gi423262426)  9e-06  Click
33 1386064..1386537  phage protein; BAV1303  N/A  Click
34 1386534..1386905  PHAGE_Entero_P1: Ref; BAV1304; phage(gi46401630)  2e-08  Click
35 1386892..1387683  PHAGE_Thalas_BA3: hypothetical protein BA3_0036; BAV1305; phage(gi160700630)  2e-13  Click
36 1387670..1388368  phage protein; BAV1306  N/A  Click
37 1388365..1388736  PHAGE_Sulfit_pCB2047_A: hypothetical protein; BAV1307; phage(gi472341907)  1e-10  Click
38 1388777..1389223  phage protein; BAV1308  N/A  Click
39 1389233..1389589  phage protein; BAV1309  N/A  Click
40 1389607..1389888  phage protein; BAV1310  N/A  Click
41 1389942..1390454  PHAGE_Salmon_SPN3UB: hypothetical protein; BAV1311; phage(gi423262398)  3e-17  Click
42 complement(1390469..1390795)  PHAGE_Burkho_phiE125: putative helix-turn-helix transcriptional regulator; BAV1312; phage(gi17975230)  1e-06  Click
43 complement(1390779..1391033)  PHAGE_Mycoba_Fruitloop: gp41; BAV1312A; phage(gi206599921)  2e-05  Click
44 1391095..1391529  PHAGE_Erwini_phiEt88: phage terminase, small subunit; BAV1313; phage(gi327198562)  2e-42  Click
45 1391510..1392931  PHAGE_Acinet_Bphi_B1251: hypothetical protein; BAV1314; phage(gi423262000)  1e-159  Click
46 1392928..1394403  PHAGE_Pseudo_PB1: putative minor head protein; BAV1315; phage(gi219523887)  2e-105  Click
47 1394348..1395196  PHAGE_Burkho_BcepB1A: gp27; BAV1316; phage(gi48697516)  2e-47  Click
48 1395189..1396439  PHAGE_Burkho_BcepB1A: gp26; BAV1317; phage(gi48697515)  9e-49  Click
49 1396442..1396909  PHAGE_Burkho_BcepB1A: gp24; BAV1318; phage(gi48697514)  2e-10  Click
50 1396925..1398004  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.117; BAV1319; phage(gi126011051)  6e-54  Click
51 1398114..1398455  PHAGE_Burkho_BcepB1A: gp22; BAV1320; phage(gi48697512)  1e-11  Click
52 1398457..1398882  PHAGE_Burkho_BcepB1A: gp21; BAV1321; phage(gi48697511)  4e-19  Click
53 1398879..1399355  PHAGE_Burkho_BcepB1A: gp20; BAV1322; phage(gi48697510)  4e-21  Click
54 1399352..1399735  PHAGE_Burkho_BcepB1A: gp19; BAV1323; phage(gi48697509)  3e-10  Click
55 1399716..1400243  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.113; BAV1324; phage(gi126011047)  4e-07  Click
56 1400252..1401760  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.111; BAV1325; phage(gi126011045)  9e-75  Click
57 1401820..1402281  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.110; BAV1326; phage(gi126011044)  7e-35  Click
58 1402293..1402718  PHAGE_Burkho_BcepB1A: gp15 E; BAV1327; phage(gi48697505)  1e-24  Click
59 1402763..1402837  phage protein; BAV1328  N/A  Click
60 1402839..1404452  PHAGE_Burkho_BcepB1A: gp14 T; BAV1329; phage(gi72257065)  4e-40  Click
61 1404449..1405000  PHAGE_Burkho_BcepB1A: gp13; BAV1330; phage(gi48697561)  1e-15  Click
62 1404988..1405299  PHAGE_Burkho_BcepB1A: gp12; BAV1331; phage(gi48697560)  9e-11  Click
63 1405289..1406116  PHAGE_Burkho_BcepB1A: gp11; BAV1332; phage(gi48697559)  7e-44  Click
64 1406101..1406808  PHAGE_Burkho_BcepB1A: gp10 V; BAV1333; phage(gi48697558)  3e-37  Click
65 1406805..1407149  PHAGE_Burkho_BcepB1A: gp09; BAV1334; phage(gi48697557)  1e-09  Click
66 1407142..1408332  PHAGE_Burkho_BcepB1A: gp08 W; BAV1335; phage(gi48697556)  1e-75  Click
67 1408329..1408979  PHAGE_Burkho_BcepB1A: gp07; BAV1336; phage(gi48697555)  2e-41  Click
68 1408982..1410130  PHAGE_Klebsi_JD001: putative tail-fiber protein; BAV1337; phage(gi448245166)  3e-26  Click
69 1410130..1410300  phage protein; BAV1337A  N/A  Click
70 1410369..1410602  phage protein; BAV1337B  N/A  Click
71 1410595..1411050  PHAGE_Iodoba_phiPLPE: gp15 putative lysozyme; BAV1338; phage(gi197085629)  4e-24  Click
72 1411047..1411529  PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; BAV1339A; phage(gi16765210)  1e-12  Click
73 complement(1411724..1411993)  phage protein; BAV1340  N/A  Click
74 complement(1412027..1412272)  phage protein; BAV1341  N/A  Click
75 complement(1412328..1412495)  phage protein; BAV1342  N/A  Click
76 complement(1412696..1413101)  tRNA  N/A  Click
77 1412696..1412719  attR    TGGTGGAGCCGGGGGGAATTGAAC  N/A  Click
78 complement(1413148..1414332)  PHAGE_Lactob_KC5a: putative minor tail protein; BAV1343; phage(gi90592623)  4e-08  Click
79 complement(1414538..1415215)  phosphoglycolate phosphatase; BAV1344  N/A  Click
80 complement(1415212..1415937)  PHAGE_Microm_12T: hypothetical protein; BAV1345; phage(gi472342811)  9e-07  Click
81 complement(1416012..1416596)  outer membrane protein A; BAV1346  N/A  Click
82 1416988..1419639  PHAGE_Clostr_st: putative DNA gyrase A subunit; BAV1347; phage(gi80159786)  1e-66  Click
Region 3, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1496587..1496635  attL    GTGCGGGTTCGAGTCCCGCCCTTCGCACCAAGAAACCCCTTAAAAATCA  N/A  Click
2 complement(1496816..1497934)  PHAGE_Cronob_phiES15: putative integrase; BAV1423; phage(gi401817566)  1e-50  Click
3 complement(1497904..1498266)  PHAGE_Bordet_1: Bbp49; BAV1423A; phage(gi41179409)  1e-06  Click
4 complement(1498263..1498523)  phage protein; BAV1423B  N/A  Click
5 complement(1498558..1498731)  phage protein; BAV1423C  N/A  Click
6 complement(1498810..1499841)  PHAGE_Entero_epsilon15: RecT; BAV1424; phage(gi30387413)  7e-63  Click
7 complement(1499838..1500692)  PHAGE_Synech_S_CBS1: exonuclease VIII; BAV1425; phage(gi356870827)  6e-42  Click
8 complement(1500696..1500881)  phage protein; BAV1426  N/A  Click
9 complement(1500878..1501165)  phage protein; BAV1427  N/A  Click
10 complement(1501235..1501984)  PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; BAV1428; phage(gi31544021)  6e-36  Click
11 1502337..1502600  PHAGE_Sodali_phiSG1: hypothetical protein SGPHI_0040; BAV1429; phage(gi89886021)  2e-08  Click
12 complement(1502601..1502726)  phage protein; BAV1430  N/A  Click
13 complement(1502778..1503002)  phage protein; BAV1431  N/A  Click
14 complement(1503034..1503126)  phage protein; BAV1432  N/A  Click
15 complement(1503554..1504108)  phage protein; BAV1434  N/A  Click
16 complement(1504110..1504532)  phage protein; BAV1435  N/A  Click
17 complement(1504791..1505153)  PHAGE_Entero_ST104: CI; BAV1436; phage(gi46358671)  5e-05  Click
18 1505226..1505447  phage protein; BAV1437  N/A  Click
19 1505440..1505706  phage protein; BAV1438  N/A  Click
20 complement(1505784..1506224)  PHAGE_Burkho_KS9: repressor protein gp41; BAV1439; phage(gi255033724)  6e-15  Click
21 1506268..1506531  PHAGE_Burkho_KS9: hypothetical protein gp42; BAV1440; phage(gi255033725)  8e-12  Click
22 complement(1506863..1507249)  PHAGE_Entero_mEp237: hypothetical protein; BAV1441; phage(gi435439303)  7e-05  Click
23 1507333..1507731  phage protein; BAV1442  N/A  Click
24 1507743..1507922  phage protein; BAV1442A  N/A  Click
25 1508037..1508519  phage protein; BAV1443  N/A  Click
26 1508516..1508767  PHAGE_Burkho_BcepMigl: hypothetical protein; BAV1444; phage(gi431809873)  6e-09  Click
27 1508764..1509708  PHAGE_Thalas_BA3: hypothetical protein BA3_0036; BAV1445; phage(gi160700630)  1e-16  Click
28 1509705..1510187  phage protein; BAV1446  N/A  Click
29 1510184..1510837  PHAGE_Tetras_SI1: hypothetical protein; BAV1447; phage(gi472342269)  4e-07  Click
30 1510830..1511147  phage protein; BAV1448  N/A  Click
31 complement(1511064..1511435)  PHAGE_Burkho_Bcep176: gp18; BAV1449; phage(gi77864643)  4e-35  Click
32 1511680..1512012  phage protein; BAV1450  N/A  Click
33 1512012..1512413  phage protein; BAV1451  N/A  Click
34 1512410..1512697  phage protein; BAV1452  N/A  Click
35 complement(1512701..1513204)  phage protein; BAV1453  N/A  Click
36 1513524..1514648  PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp25; BAV1454; phage(gi209552444)  7e-24  Click
37 1514705..1515034  phage protein; BAV1454A  N/A  Click
38 complement(1515064..1515342)  PHAGE_Burkho_phiE202: gp7, pANL12; BAV1455; phage(gi134288781)  6e-10  Click
39 complement(1515329..1515595)  PHAGE_Burkho_phiE202: gp6, pANL56; BAV1456; phage(gi134288760)  1e-09  Click
40 1515776..1516159  PHAGE_Burkho_KS9: homing endonuclease gp49; BAV1457; phage(gi255033732)  6e-31  Click
41 1516356..1516838  PHAGE_Burkho_2: gp1, phage terminase, small subunit, P27 family; BAV1459; phage(gi134288627)  1e-56  Click
42 1516839..1518566  PHAGE_Burkho_2: gp2, phage terminase, large subunit, putative; BAV1460; phage(gi134288625)  0.0  Click
43 1518568..1518723  phage protein; BAV1461  N/A  Click
44 1518720..1519952  PHAGE_Entero_SfV: portal protein; BAV1462; phage(gi19548993)  3e-129  Click
45 1519961..1520578  PHAGE_Entero_SfV: capsid protease; BAV1463; phage(gi19548994)  1e-52  Click
46 1520591..1521814  PHAGE_Burkho_KS9: major capsid protein gp5; BAV1464; phage(gi255033737)  3e-50  Click
47 1521822..1522172  PHAGE_Entero_mEp235: head-tail connector II; BAV1465; phage(gi428781817)  4e-13  Click
48 1522183..1522521  PHAGE_Burkho_KS9: head-tail adaptor gp7; BAV1466; phage(gi255033739)  8e-12  Click
49 1522518..1523012  PHAGE_Xantho_CP1: hypothetical protein; BAV1467; phage(gi431811007)  7e-18  Click
50 1523005..1523355  PHAGE_Xantho_CP1: hypothetical protein; BAV1468; phage(gi431811008)  1e-12  Click
51 1523352..1523795  phage protein; BAV1469  N/A  Click
52 1523867..1524514  PHAGE_Cronob_phiES15: putative major tail protein; BAV1470; phage(gi401817602)  6e-27  Click
53 1524548..1524865  PHAGE_Entero_TLS: TfmA; BAV1471; phage(gi148734515)  1e-13  Click
54 1524865..1525173  PHAGE_Entero_HK578: hypothetical protein; BAV1472; phage(gi428782873)  2e-11  Click
55 1525196..1530745  PHAGE_Xantho_CP1: putative tail length tape measure protein; BAV1473; phage(gi431811013)  4e-68  Click
56 1530742..1531632  PHAGE_Salico_CGphi29: hypothetical protein; BAV1474; phage(gi472340191)  3e-22  Click
57 1531634..1532563  PHAGE_Salini_CW02: putative tail fiber; BAV1475; phage(gi423261944)  2e-05  Click
58 1532570..1532962  PHAGE_Edward_MSW_3: putative tail assembly chaperone; BAV1476; phage(gi448261067)  1e-07  Click
59 1532959..1533327  PHAGE_Rhodob_RcapMu: hypothetical protein; BAV1477; phage(gi356870895)  2e-05  Click
60 1533328..1534149  phage protein; BAV1478  N/A  Click
61 1534154..1534369  PHAGE_Yersin_PY54: hypothetical protein PY54p60; BAV1479; phage(gi33770569)  5e-06  Click
62 1534369..1534920  PHAGE_Xantho_CP1: hypothetical protein; BAV1480; phage(gi431811023)  9e-15  Click
63 complement(1534964..1535488)  phage protein; BAV1480A  N/A  Click
64 1535707..1536228  PHAGE_Burkho_KS9: Rz gp24; BAV1481; phage(gi255033755)  7e-12  Click
65 complement(1536357..1536641)  phage protein; BAV1482  N/A  Click
66 1536966..1537014  attR    GTGCGGGTTCGAGTCCCGCCCTTCGCACCAAGAAACCCCTTAAAAATCA  N/A  Click