Definition Proteus mirabilis HI4320 chromosome, complete genome.
Accession NC_010554
Length 4,063,606
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 54 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(535180..535488)  PHAGE_Escher_HK75: Nun; PMI0476; phage(gi356870713)  7e-08  Click
2 complement(535490..535768)  hypothetical protein; PMI0477  N/A  Click
3 complement(536291..536596)  hypothetical protein; PMI0478  N/A  Click
4 complement(536627..537328)  PHAGE_Escher_HK75: cI repressor; PMI0479; phage(gi356870714)  4e-48  Click
5 537436..537621  phage regulatory protein; PMI0480  N/A  Click
6 537742..538089  phage regulatory protein; PMI0481  N/A  Click
7 538355..539122  PHAGE_Salmon_ST64B: putative replication protein; PMI0482; phage(gi23505486)  3e-31  Click
8 539122..540507  PHAGE_Entero_Sf6: gene 44 protein; PMI0483; phage(gi41057321)  1e-116  Click
9 540533..540982  PHAGE_Cronob_phiES15: hypothetical protein; PMI0484; phage(gi401817579)  3e-11  Click
10 541061..541351  PHAGE_Entero_HK140: hypothetical protein; PMI0485; phage(gi428781999)  2e-35  Click
11 541348..541704  PHAGE_Escher_HK639: Rus Holliday junction resolvase; PMI0486; phage(gi356870665)  7e-47  Click
12 541704..542336  PHAGE_Cronob_phiES15: putative antitermination protein Q; PMI0487; phage(gi401817583)  4e-27  Click
13 542647..543168  phage membrane protein; PMI0488  N/A  Click
14 543327..543749  PHAGE_Klebsi_phiKO2: Gp62; PMI0489; phage(gi46402148)  2e-20  Click
15 543797..544072  PHAGE_Salmon_SPN3UB: hypothetical protein; PMI0490; phage(gi423262443)  6e-06  Click
16 544072..544542  PHAGE_Salmon_SE1: Gp19; PMI0491; phage(gi219681236)  7e-44  Click
17 544524..544682  hypothetical protein; PMI0491A  N/A  Click
18 544685..545146  PHAGE_Sodali_phiSG1: putative phage endopeptidase; PMI0492; phage(gi89885988)  3e-15  Click
19 545287..546078  PHAGE_Salmon_SPN3UB: hypothetical protein; PMI0493; phage(gi423262398)  1e-23  Click
20 546075..546281  hypothetical protein; PMI0494  N/A  Click
21 546278..546436  hypothetical protein; PMI0495  N/A  Click
22 546464..547072  PHAGE_Escher_HK639: terminase small subunit; PMI0496; phage(gi356870601)  1e-63  Click
23 547075..548562  PHAGE_Cronob_phiES15: terminase large subunit; PMI0497; phage(gi401817592)  0.0  Click
24 548562..549932  PHAGE_Burkho_KL1: portal protein; PMI0498; phage(gi399528722)  1e-66  Click
25 549929..551050  PHAGE_Cronob_phiES15: hypothetical protein; PMI0499; phage(gi401817594)  7e-106  Click
26 551162..551923  PHAGE_Xantho_Xp15: putative phage structural protein; PMI0500; phage(gi66392059)  6e-20  Click
27 551937..552890  PHAGE_Cronob_phiES15: putative major capsid protein; PMI0501; phage(gi401817596)  1e-29  Click
28 553217..553696  PHAGE_Cronob_phiES15: hypothetical protein; PMI0503; phage(gi401817598)  2e-27  Click
29 553699..554049  PHAGE_Cronob_phiES15: putative structural protein 2; PMI0504; phage(gi401817599)  6e-23  Click
30 554051..554632  PHAGE_Shigel_EP23: putative tail protein; PMI0505; phage(gi371496282)  2e-28  Click
31 554629..555030  PHAGE_Cronob_phiES15: hypothetical protein; PMI0506; phage(gi401817601)  3e-06  Click
32 555076..555732  PHAGE_Cronob_phiES15: putative major tail protein; PMI0507; phage(gi401817602)  3e-42  Click
33 555784..556089  PHAGE_Cronob_phiES15: hypothetical protein; PMI0508; phage(gi401817603)  4e-24  Click
34 556116..556391  PHAGE_Cronob_phiES15: hypothetical protein; PMI0509; phage(gi401817604)  2e-14  Click
35 556617..556850  phage protein; PMI0510  N/A  Click
36 556857..557666  PHAGE_Cronob_phiES15: hypothetical protein; PMI0511; phage(gi401817564)  1e-07  Click
37 complement(557917..558750)  PHAGE_Salmon_vB_SosS_Oslo: putative antirepressor protein Ant; PMI0512; phage(gi399528777)  2e-69  Click
38 complement(558820..558981)  phage protein; PMI0513  N/A  Click
39 559095..559352  PHAGE_Salmon_ST160: Mnt; PMI0514; phage(gi318065963)  1e-07  Click
40 559453..560298  PHAGE_Lactob_LF1: chromosome partitioning ATPase; PMI0515; phage(gi418489414)  3e-27  Click
41 560285..560704  PHAGE_Lactob_LF1: hypothetical protein; PMI0516; phage(gi418489413)  4e-06  Click
42 560697..561365  hypothetical protein; PMI0517  N/A  Click
43 561463..562116  phage lipoprotein; PMI0518  N/A  Click
44 562176..565115  PHAGE_Cronob_phiES15: putative tail tape measure protein; PMI0519; phage(gi401817605)  1e-147  Click
45 565138..565350  hypothetical protein; PMI0520  N/A  Click
46 565390..565680  PHAGE_Entero_HK97: Gp22; PMI0521; phage(gi9634178)  8e-06  Click
47 complement(565700..565900)  phage protein; PMI0522  N/A  Click
48 566044..566385  PHAGE_Cronob_phiES15: putative minor tail protein; PMI0523; phage(gi401817607)  2e-28  Click
49 566382..567125  PHAGE_Entero_mEp390: minor tail protein; PMI0524; phage(gi428782679)  1e-86  Click
50 567122..567832  PHAGE_Cronob_ENT39118: minor tail protein; PMI0525; phage(gi431811059)  2e-85  Click
51 567829..568416  PHAGE_Cronob_ENT39118: tail assembly protein; PMI0526; phage(gi431811064)  5e-59  Click
52 568468..572661  PHAGE_Cronob_ENT39118: phage tail protein; PMI0527; phage(gi431811044)  0.0  Click
53 572655..573023  phage protein; PMI0528  N/A  Click
54 573025..573639  phage protein; PMI0529  N/A  Click
Region 2, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 981716..981727  attL    CATCAAACGAAT  N/A  Click
2 complement(984338..985471)  PHAGE_Entero_mEp235: integrase; PMI0892; phage(gi428781836)  6e-62  Click
3 complement(985446..985697)  excisionase; PMI0893  N/A  Click
4 complement(985758..986234)  PHAGE_Pectob_ZF40: putative methylase; PMI0894; phage(gi422936660)  4e-55  Click
5 complement(986218..986469)  phage protein; PMI0895  N/A  Click
6 complement(986469..987002)  PHAGE_Salmon_SSU5: hypothetical protein; PMI0896; phage(gi410491510)  9e-41  Click
7 complement(987012..987191)  phage protein; PMI0897  N/A  Click
8 complement(987219..987440)  phage protein; PMI0898  N/A  Click
9 complement(987453..987950)  PHAGE_Xantho_vB_XveM_DIBBI: single-stranded DNA-binding protein; PMI0899; phage(gi389060431)  1e-52  Click
10 complement(988009..988836)  PHAGE_Entero_SfV: hypothetical protein SfVp31; PMI0900; phage(gi19549018)  3e-82  Click
11 complement(988902..989276)  PHAGE_Entero_SfV: hypothetical protein SfVp32; PMI0901; phage(gi19549019)  1e-32  Click
12 complement(989300..989482)  hypothetical protein; PMI0902  N/A  Click
13 complement(989925..990407)  prophage repressor; PMI0903  N/A  Click
14 990511..990750  PHAGE_Aggreg_S1249: phage protein; PMI0904; phage(gi273809591)  2e-15  Click
15 990835..991497  phage protein; PMI0905  N/A  Click
16 991513..991971  PHAGE_Entero_mEp390: hypothetical protein; PMI0906; phage(gi428782704)  5e-33  Click
17 992057..992230  phage protein; PMI0907  N/A  Click
18 992227..992406  phage protein; PMI0908  N/A  Click
19 992419..993510  PHAGE_Erwini_PEp14: putative phage O family protein; PMI0909; phage(gi374531901)  3e-36  Click
20 993664..994386  PHAGE_Cronob_ENT47670: phage antirepressor protein; PMI0910; phage(gi431810509)  6e-59  Click
21 994386..995411  PHAGE_Entero_SfV: hypothetical protein SfVp45; PMI0911; phage(gi19549032)  3e-67  Click
22 995439..995837  PHAGE_Entero_phiP27: putative antitermination protein Q; PMI0912; phage(gi18249885)  1e-33  Click
23 996178..996390  PHAGE_Lactoc_bIL312: Csp; PMI0913; phage(gi13095918)  8e-17  Click
24 1000454..1000465  attR    CATCAAACGAAT  N/A  Click
Region 3, total : 26 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1001831..1002253  PHAGE_Klebsi_phiKO2: Gp62; PMI0918; phage(gi46402148)  1e-20  Click
2 1002306..1002575  PHAGE_Salmon_SPN3UB: hypothetical protein; PMI0919; phage(gi423262443)  6e-06  Click
3 1002575..1003045  PHAGE_Salmon_SE1: Gp19; PMI0920; phage(gi219681236)  7e-44  Click
4 1003188..1003649  PHAGE_Entero_HK630: cell lysis protein Rz; PMI0921; phage(gi428782852)  4e-14  Click
5 1004547..1004885  PHAGE_Escher_HK75: hypothetical protein; PMI0922; phage(gi356870734)  1e-41  Click
6 1005004..1005471  PHAGE_Entero_mEp235: terminase small subunit; PMI0923; phage(gi428781811)  2e-31  Click
7 1005425..1007158  PHAGE_Tetras_SI1: terminase; PMI0924; phage(gi472342258)  8e-137  Click
8 1007158..1008426  PHAGE_Escher_HK75: portal protein; PMI0925; phage(gi356870680)  0.0  Click
9 1008444..1009112  PHAGE_Escher_HK75: prohead protease; PMI0926; phage(gi356870681)  6e-84  Click
10 1009116..1010282  PHAGE_Cronob_ENT39118: major capsid protein; PMI0927; phage(gi431811052)  4e-174  Click
11 1010321..1010620  PHAGE_Escher_HK75: hypothetical protein; PMI0928; phage(gi356870683)  2e-33  Click
12 1010620..1010949  PHAGE_Pseudo_PAJU2: putative head-tail adaptor; PMI0929; phage(gi209552428)  3e-12  Click
13 1010942..1011412  PHAGE_Escher_HK75: hypothetical protein; PMI0930; phage(gi356870685)  8e-19  Click
14 1011418..1011759  phage protein; PMI0931  N/A  Click
15 1011769..1012434  PHAGE_Burkho_Bcep176: gp70; PMI0932; phage(gi77864696)  7e-05  Click
16 1012499..1012915  phage protein; PMI0933  N/A  Click
17 1012918..1013190  phage protein; PMI0934  N/A  Click
18 complement(1013215..1013406)  phage membrane protein; PMI0935  N/A  Click
19 1013509..1016808  PHAGE_Escher_HK75: tail length tape measure protein; PMI0936; phage(gi356870691)  4e-74  Click
20 1016809..1017405  PHAGE_Yersin_PY54: hypothetical protein PY54p16; PMI0937; phage(gi33770525)  1e-43  Click
21 1017405..1017986  PHAGE_Yersin_PY54: hypothetical protein PY54p17; PMI0938; phage(gi33770526)  7e-54  Click
22 1018043..1018441  PHAGE_Yersin_PY54: hypothetical protein PY54p19; PMI0939; phage(gi33770528)  2e-25  Click
23 1018441..1021470  PHAGE_Yersin_PY54: tail protein; PMI0940; phage(gi33770530)  0.0  Click
24 1021474..1022475  phage protein; PMI0941  N/A  Click
25 1022674..1022922  colicin immunity protein; PMI0943  N/A  Click
26 1022971..1023120  phage protein; PMI0944  N/A  Click
Region 4, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1826750..1827292)  PHAGE_Cafete_BV_PW1: hypothetical protein; PMI1708; phage(gi310831133)  2e-15  Click
2 1827859..1828038  hypothetical protein; PMI1709  N/A  Click
3 complement(1828299..1829552)  PHAGE_Burkho_BcepB1A: gp05 H; PMI1710; phage(gi48697553)  3e-16  Click
4 complement(1829558..1830214)  PHAGE_Burkho_BcepB1A: gp07; PMI1711; phage(gi48697555)  2e-42  Click
5 complement(1830211..1831398)  PHAGE_Burkho_BcepB1A: gp08 W; PMI1712; phage(gi48697556)  1e-76  Click
6 complement(1831391..1831735)  PHAGE_Burkho_BcepB1A: gp09; PMI1713; phage(gi48697557)  9e-11  Click
7 complement(1831732..1832424)  PHAGE_Burkho_BcepB1A: gp10 V; PMI1714; phage(gi48697558)  7e-38  Click
8 complement(1832427..1833239)  PHAGE_Burkho_BcepB1A: gp11; PMI1715; phage(gi48697559)  6e-44  Click
9 complement(1833208..1833528)  PHAGE_Burkho_BcepB1A: gp12; PMI1716; phage(gi48697560)  7e-10  Click
10 complement(1833541..1834029)  PHAGE_Burkho_BcepB1A: gp13; PMI1717; phage(gi48697561)  2e-11  Click
11 complement(1834032..1836335)  PHAGE_Burkho_BcepB1A: gp14 T; PMI1718; phage(gi72257065)  4e-20  Click
12 complement(1836418..1836876)  PHAGE_Burkho_BcepB1A: gp15 E; PMI1719; phage(gi48697505)  1e-27  Click
13 complement(1836936..1837388)  PHAGE_Burkho_BcepB1A: gp16; PMI1720; phage(gi48697506)  3e-29  Click
14 complement(1837399..1838886)  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.111; PMI1721; phage(gi126011045)  1e-68  Click
15 complement(1838895..1839407)  PHAGE_Pseudo_KPP12: hypothetical protein; PMI1722; phage(gi431811109)  2e-05  Click
16 complement(1839444..1839893)  PHAGE_Entero_ES18: gp77; PMI1723; phage(gi62362290)  6e-15  Click
17 complement(1839890..1840294)  PHAGE_Salmon_SSU5: putative endolysin; PMI1724; phage(gi410491437)  3e-21  Click
18 complement(1840297..1840596)  PHAGE_Entero_P22: inhibitor of gene 13' protein holin; PMI1725; phage(gi9635530)  3e-19  Click
19 complement(1840978..1841793)  PHAGE_Salmon_SPN3UB: antitermination protein Q; PMI1726; phage(gi423262441)  1e-49  Click
20 1842039..1842776  PHAGE_Erwini_phiEt88: phage repressor protein; PMI1727; phage(gi327198606)  2e-36  Click
Region 5, total : 42 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2114434..2114445  attL    CTCCTATCCTTT  N/A  Click
2 2117082..2117106  attL    ATAAAAAAGCCATCTTGCGATGGCT  N/A  Click
3 complement(2118115..2118333)  PHAGE_Salmon_RE_2010: OGR regulator of late gene transcription; PMI1970; phage(gi418489727)  4e-21  Click
4 complement(2118386..2119483)  PHAGE_Salmon_RE_2010: gene D protein; PMI1971; phage(gi418489726)  1e-119  Click
5 complement(2119483..2119953)  PHAGE_Salmon_RE_2010: tail protein; PMI1972; phage(gi418489725)  7e-47  Click
6 complement(2119947..2122781)  PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; PMI1973; phage(gi428782750)  4e-101  Click
7 complement(2122908..2123255)  PHAGE_Salmon_RE_2010: tail protein E; PMI1974; phage(gi418489722)  6e-22  Click
8 complement(2123275..2123790)  PHAGE_Salmon_RE_2010: major tail tube protein; PMI1975; phage(gi418489721)  1e-56  Click
9 complement(2123794..2124966)  PHAGE_Salmon_RE_2010: major tail sheath protein; PMI1976; phage(gi418489720)  1e-165  Click
10 complement(2125066..2126697)  PHAGE_Salmon_RE_2010: tail fiber protein; PMI1977; phage(gi418489713)  4e-61  Click
11 complement(2126687..2127298)  PHAGE_Salmon_RE_2010: tail protein I; PMI1978; phage(gi418489712)  2e-69  Click
12 complement(2127291..2128199)  PHAGE_Erwini_ENT90: baseplate assembly protein; PMI1979; phage(gi431810943)  2e-109  Click
13 complement(2128201..2128539)  PHAGE_Erwini_ENT90: baseplate assembly protein; PMI1980; phage(gi431810974)  2e-27  Click
14 complement(2128536..2129162)  PHAGE_Erwini_ENT90: baseplate assembly protein; PMI1981; phage(gi431810950)  2e-51  Click
15 complement(2129228..2129863)  PHAGE_Burkho_phiE202: gp39, phage virion morphogenesis protein; PMI1982; phage(gi134288746)  2e-18  Click
16 complement(2129853..2130290)  PHAGE_Salmon_RE_2010: tail protein; PMI1983; phage(gi418489706)  1e-35  Click
17 complement(2130265..2130768)  PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; PMI1984; phage(gi169257297)  7e-11  Click
18 complement(2130765..2131169)  PHAGE_Cronob_vB_CsaM_GAP161: putative endolysin; PMI1985; phage(gi414086235)  4e-41  Click
19 complement(2131162..2131476)  PHAGE_Cronob_ENT47670: phage holin; PMI1986; phage(gi431810538)  5e-21  Click
20 complement(2131496..2131702)  PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; PMI1987; phage(gi134288782)  7e-18  Click
21 complement(2131702..2132157)  PHAGE_Salmon_RE_2010: head completion-stabilization protein; PMI1988; phage(gi418489701)  3e-32  Click
22 complement(2132235..2132903)  PHAGE_Salmon_RE_2010: terminase endonuclease subunit; PMI1989; phage(gi418489700)  7e-43  Click
23 complement(2132903..2134048)  PHAGE_Salmon_RE_2010: major capsid protein; PMI1990; phage(gi418489699)  4e-130  Click
24 complement(2134064..2134873)  PHAGE_Salmon_RE_2010: capsid scaffolding protein; PMI1991; phage(gi418489698)  1e-62  Click
25 2135046..2136800  PHAGE_Salmon_RE_2010: terminase ATPase subunit; PMI1992; phage(gi418489697)  0.0  Click
26 2136800..2137828  PHAGE_Salmon_RE_2010: capsid packaging protein; PMI1993; phage(gi418489696)  1e-135  Click
27 complement(2138439..2139566)  PHAGE_Clostr_phiCD27: putative phage DNA-binding protein; PMI1994; phage(gi209901309)  7e-32  Click
28 complement(2139577..2140170)  hypothetical protein; PMI1995  N/A  Click
29 complement(2140281..2140493)  hypothetical protein; PMI1996  N/A  Click
30 complement(2140486..2142864)  PHAGE_Yersin_413C: gpA; PMI1997; phage(gi30065742)  4e-165  Click
31 complement(2142864..2143187)  hypothetical protein; PMI1998  N/A  Click
32 complement(2143187..2144011)  PHAGE_Salmon_RE_2010: DNA adenine methyltransferase; PMI1999; phage(gi418489691)  6e-60  Click
33 complement(2144013..2144234)  PHAGE_Erwini_ENT90: hypothetical protein; PMI2000; phage(gi431810989)  6e-14  Click
34 complement(2144227..2144484)  phage protein; PMI2001  N/A  Click
35 complement(2144502..2144897)  PHAGE_Salmon_RE_2010: hypothetical protein; PMI2002; phage(gi418489688)  2e-06  Click
36 complement(2144906..2145055)  hypothetical protein; PMI2003  N/A  Click
37 complement(2145052..2145249)  hypothetical protein; PMI2004  N/A  Click
38 complement(2145255..2145530)  PHAGE_Entero_P2: Cox; PMI2005; phage(gi9630359)  2e-15  Click
39 2145633..2145932  PHAGE_Entero_P2: gpC; PMI2006; phage(gi9630358)  2e-20  Click
40 2145999..2146982  PHAGE_Salmon_RE_2010: integrase; PMI2007; phage(gi418489683)  1e-62  Click
41 2147092..2147116  attR    ATAAAAAAGCCATCTTGCGATGGCT  N/A  Click
42 complement(2147151..2148665)  lysyl-tRNA synthetase; PMI2008  N/A  Click
43 complement(2148674..2149772)  PHAGE_Mycoba_ScottMcG: gp204; PMI2009; phage(gi203459047)  3e-09  Click
44 complement(2149944..2151677)  PHAGE_Bacill_36: RecJ; PMI2010; phage(gi156564062)  1e-63  Click
45 complement(2151687..2152394)  thiol:disulfide interchange protein; PMI2011  N/A  Click
46 complement(2152428..2153369)  PHAGE_Salmon_RE_2010: integrase; PMI2012; phage(gi418489683)  4e-11  Click
47 2165745..2165756  attR    CTCCTATCCTTT  N/A  Click