Definition Leptothrix cholodnii SP-6 chromosome, complete genome.
Accession NC_010524
Length 4,909,403
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 60 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2428920..2428937  attL    CAGCTCGGCCAGGCGCTG  N/A  Click
2 complement(2435945..2441692)  PHAGE_Yersin_PY54: tail protein; Lcho_2232; phage(gi33770530)  3e-28  Click
3 complement(2441689..2442258)  PHAGE_Yersin_PY54: hypothetical protein PY54p17; Lcho_2233; phage(gi33770526)  2e-09  Click
4 complement(2442255..2442881)  PHAGE_Yersin_PY54: hypothetical protein PY54p16; Lcho_2234; phage(gi33770525)  4e-12  Click
5 complement(2442889..2446230)  PHAGE_Pseudo_MP29: putative tail component protein; Lcho_2235; phage(gi215480016)  4e-69  Click
6 complement(2446246..2446614)  PHAGE_Entero_HK578: hypothetical protein; Lcho_2236; phage(gi428782873)  1e-09  Click
7 complement(2446632..2446982)  PHAGE_Escher_HK639: hypothetical protein; Lcho_2237; phage(gi356870614)  2e-06  Click
8 complement(2446993..2447958)  PHAGE_Synech_S_CBS1: hypothetical protein; Lcho_2238; phage(gi356870806)  3e-25  Click
9 complement(2447997..2448215)  hypothetical protein; Lcho_2239  N/A  Click
10 complement(2448249..2448710)  hypothetical protein; Lcho_2240  N/A  Click
11 complement(2448707..2449120)  PHAGE_Rhodob_RcapMu: conserved phage protein; Lcho_2241; phage(gi356870882)  4e-16  Click
12 complement(2449130..2449348)  PHAGE_Rhodov_RS1: hypothetical protein; Lcho_2242; phage(gi472342917)  7e-05  Click
13 complement(2449476..2450357)  PHAGE_Rhodov_RS1: major head protein; Lcho_2243; phage(gi472342916)  3e-55  Click
14 complement(2450399..2450812)  PHAGE_Rhodov_RS1: hypothetical protein; Lcho_2244; phage(gi472342915)  2e-20  Click
15 complement(2450866..2451987)  PHAGE_Pseudo_JBD30: hypothetical protein; Lcho_2245; phage(gi448244621)  2e-51  Click
16 complement(2452054..2452632)  hypothetical protein; Lcho_2246  N/A  Click
17 complement(2452638..2453393)  PHAGE_Burkho_BcepMu: gp30; Lcho_2247; phage(gi48696940)  7e-32  Click
18 complement(2453396..2455150)  PHAGE_Pseudo_MP22: portal protein; Lcho_2248; phage(gi157834998)  5e-104  Click
19 complement(2455308..2456990)  PHAGE_Burkho_BcepMu: gp28; Lcho_2249; phage(gi48696938)  1e-117  Click
20 complement(2456987..2457208)  hypothetical protein; Lcho_2250  N/A  Click
21 complement(2457205..2457777)  PHAGE_Burkho_BcepMu: gp27; Lcho_2251; phage(gi48696937)  3e-28  Click
22 complement(2457781..2458086)  PHAGE_Escher_D108: hypothetical protein; Lcho_2252; phage(gi281199669)  1e-12  Click
23 complement(2458083..2458436)  hypothetical protein; Lcho_2253  N/A  Click
24 complement(2458494..2458835)  hypothetical protein; Lcho_2254  N/A  Click
25 complement(2458858..2459877)  PHAGE_Bordet_1: reverse transcriptase; Lcho_2255; phage(gi41179367)  2e-44  Click
26 complement(2460143..2460568)  hypothetical protein; Lcho_2256  N/A  Click
27 complement(2460605..2462149)  PHAGE_Pelagi_HTVC010P: putative tail tubular protein B; Lcho_2257; phage(gi460042270)  1e-08  Click
28 complement(2462149..2462454)  hypothetical protein; Lcho_2258  N/A  Click
29 complement(2462478..2462690)  hypothetical protein; Lcho_2259  N/A  Click
30 complement(2462687..2463175)  PHAGE_Burkho_KS9: endolysin gp23; Lcho_2260; phage(gi255033754)  7e-32  Click
31 complement(2463600..2464190)  hypothetical protein; Lcho_2261  N/A  Click
32 complement(2464198..2464989)  hypothetical protein; Lcho_2262  N/A  Click
33 complement(2465090..2465338)  hypothetical protein; Lcho_2263  N/A  Click
34 complement(2465399..2465725)  hypothetical protein; Lcho_2264  N/A  Click
35 complement(2465781..2466224)  PHAGE_Burkho_phi52237: helix-turn-helix domain protein; Lcho_2265; phage(gi72537692)  3e-14  Click
36 2466681..2467154  PHAGE_Burkho_BcepMu: gp16; Lcho_2266; phage(gi48696926)  6e-16  Click
37 2467211..2467702  hypothetical protein; Lcho_2267  N/A  Click
38 2467741..2468115  hypothetical protein; Lcho_2268  N/A  Click
39 2468115..2468381  hypothetical protein; Lcho_2269  N/A  Click
40 2468378..2468683  PHAGE_Burkho_BcepMu: gp12; Lcho_2270; phage(gi48696922)  3e-11  Click
41 2468683..2468958  hypothetical protein; Lcho_2271  N/A  Click
42 2468955..2469971  hypothetical protein; Lcho_2272  N/A  Click
43 2470002..2471795  PHAGE_Burkho_BcepMu: gp09; Lcho_2273; phage(gi48696919)  1e-92  Click
44 2471838..2473136  PHAGE_Burkho_BcepMu: gp08; Lcho_2274; phage(gi48696918)  3e-83  Click
45 2473166..2473498  hypothetical protein; Lcho_2275  N/A  Click
46 2473498..2473827  hypothetical protein; Lcho_2276  N/A  Click
47 2473818..2474453  PHAGE_Burkho_KS10: hypothetical protein KS10_gp20; Lcho_2277; phage(gi198449282)  2e-11  Click
48 2474450..2474809  helix-turn-helix type 11 domain-containing protein; Lcho_2278  N/A  Click
49 2474848..2475033  PHAGE_Burkho_BcepMu: gp05; Lcho_2279; phage(gi48696915)  9e-08  Click
50 2475079..2475378  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; Lcho_2280; phage(gi24373865)  3e-10  Click
51 2475375..2476262  PROPHAGE_Escher_CFT073: transposase insF; Lcho_2281; phage(gi26249410)  3e-58  Click
52 2476272..2476727  PHAGE_Burkho_BcepMu: gp05; Lcho_2282; phage(gi48696915)  1e-48  Click
53 2476736..2476993  hypothetical protein; Lcho_2283  N/A  Click
54 2477202..2477678  PHAGE_Burkho_BcepMu: gp02; Lcho_2284; phage(gi48696912)  2e-16  Click
55 2477675..2478037  PHAGE_Burkho_BcepMu: gp01; Lcho_2285; phage(gi48696911)  4e-11  Click
56 2478200..2478403  hypothetical protein; Lcho_2286  N/A  Click
57 2478548..2478748  PHAGE_Acinet_Bphi_B1251: hypothetical protein; Lcho_2287; phage(gi423262005)  9e-19  Click
58 2478751..2478960  hypothetical protein; Lcho_2288  N/A  Click
59 2479258..2480313  extracellular solute-binding protein; Lcho_2289  N/A  Click
60 2480395..2480733  histone family protein nucleoid-structuring protein H-NS; Lcho_2290  N/A  Click
61 2480988..2481716  PHAGE_Bacill_36: baseplate hub protein; Lcho_2291; phage(gi156564128)  2e-10  Click
62 2494881..2494898  attR    CAGCTCGGCCAGGCGCTG  N/A  Click