| Definition | Haemophilus somnus 2336 chromosome, complete genome. |
|---|---|
| Accession | NC_010519 |
| Length | 2,263,857 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 20 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 240568..240581 | attL CCCTCTCACCGCCA | N/A | Click |
| 2 | 240845..241798 | PROPHAGE_Entero_Fels-2: integrase-like protein; HSM_0222; phage(gi16766052) | 1e-32 | Click |
| 3 | complement(241901..243037) | PROPHAGE_Escher_Sakai: putative transposase; HSM_0223; phage(gi38704244) | 9e-125 | Click |
| 4 | 243084..243500 | PROPHAGE_Escher_Sakai: putative transposase; HSM_0224; phage(gi15834436) | 2e-47 | Click |
| 5 | complement(243787..244248) | PHAGE_Haemop_HP2: orf21; HSM_0225; phage(gi17981835) | 6e-34 | Click |
| 6 | complement(244245..244697) | PHAGE_Haemop_HP2: packaging protein; HSM_0226; phage(gi17981834) | 2e-39 | Click |
| 7 | complement(244690..245571) | PHAGE_Haemop_HP2: packaging protein; HSM_0227; phage(gi17981833) | 6e-54 | Click |
| 8 | complement(245600..246631) | PHAGE_Haemop_HP2: capsid; HSM_0228; phage(gi17981832) | 2e-117 | Click |
| 9 | complement(246641..247066) | PHAGE_Haemop_HP2: scaffold; HSM_0229; phage(gi17981831) | 2e-07 | Click |
| 10 | complement(247017..247538) | PHAGE_Haemop_HP2: scaffold; HSM_0230; phage(gi17981831) | 1e-41 | Click |
| 11 | 247701..249488 | PHAGE_Haemop_HP2: terminase; HSM_0231; phage(gi17981830) | 0.0 | Click |
| 12 | 249499..250527 | PHAGE_Haemop_HP2: orf15; HSM_0232; phage(gi17981829) | 1e-121 | Click |
| 13 | 250583..250861 | PHAGE_Pasteu_F108: hypothetical protein F108p17; HSM_0233; phage(gi109302913) | 4e-14 | Click |
| 14 | complement(250962..251357) | PHAGE_Lactob_1: DNA methylase; HSM_0234; phage(gi219563243) | 5e-11 | Click |
| 15 | complement(251354..252739) | PHAGE_Lister_B025: gp42; HSM_0235; phage(gi157325259) | 4e-23 | Click |
| 16 | complement(252756..253286) | hypothetical protein; HSM_0236 | N/A | Click |
| 17 | complement(253301..255490) | PHAGE_Thermo_THSA_485A: protein of unknown function DUF927; HSM_0237; phage(gi397912648) | 1e-21 | Click |
| 18 | complement(255487..255756) | hypothetical protein; HSM_0238 | N/A | Click |
| 19 | complement(255749..256237) | hypothetical protein; HSM_0239 | N/A | Click |
| 20 | complement(256389..256667) | hypothetical protein; HSM_0240 | N/A | Click |
| 21 | complement(256736..257500) | PHAGE_Lactoc_Tuc2009: putative methylase; HSM_0241; phage(gi13487817) | 6e-108 | Click |
| 22 | 264355..264368 | attR CCCTCTCACCGCCA | N/A | Click |
Region 2, total : 50 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(746757..747233) | PHAGE_Plankt_PaV_LD: ABC transporter; HSM_0644; phage(gi371496158) | 1e-16 | Click |
| 2 | complement(747563..747808) | PHAGE_Haemop_SuMu: transcription regulator; HSM_0645; phage(gi418489036) | 6e-15 | Click |
| 3 | complement(748000..748527) | hypothetical protein; HSM_0646 | N/A | Click |
| 4 | 748861..750849 | PHAGE_Haemop_SuMu: phage transposase; HSM_0647; phage(gi418489038) | 0.0 | Click |
| 5 | 750853..751728 | PHAGE_Haemop_SuMu: phage transposase; HSM_0648; phage(gi418489040) | 5e-69 | Click |
| 6 | 751951..752166 | hypothetical protein; HSM_0649 | N/A | Click |
| 7 | 752175..752369 | PHAGE_Haemop_SuMu: Gam; HSM_0650; phage(gi418489041) | 1e-05 | Click |
| 8 | 752606..753223 | PHAGE_Burkho_BcepMu: gp05; HSM_0651; phage(gi48696915) | 4e-68 | Click |
| 9 | 753390..753710 | hypothetical protein; HSM_0652 | N/A | Click |
| 10 | 754070..754237 | hypothetical protein; HSM_0653 | N/A | Click |
| 11 | 754404..754796 | hypothetical protein; HSM_0654 | N/A | Click |
| 12 | 754904..755254 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0655; phage(gi418489048) | 2e-06 | Click |
| 13 | 755381..755755 | hypothetical protein; HSM_0656 | N/A | Click |
| 14 | 755742..756152 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0657; phage(gi418489049) | 3e-23 | Click |
| 15 | 756212..756706 | hypothetical protein; HSM_0658 | N/A | Click |
| 16 | 756891..757319 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0659; phage(gi418489051) | 4e-29 | Click |
| 17 | 757402..757938 | PHAGE_Haemop_SuMu: putative N-acetylmuramoyl-L-alanine amidase; HSM_0660; phage(gi418489052) | 9e-71 | Click |
| 18 | 758081..758323 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0661; phage(gi418489053) | 7e-29 | Click |
| 19 | 758320..758574 | hypothetical protein; HSM_0662 | N/A | Click |
| 20 | 758685..758939 | hypothetical protein; HSM_0663 | N/A | Click |
| 21 | 758939..759193 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0664; phage(gi418489058) | 3e-09 | Click |
| 22 | 759194..759697 | PHAGE_Haemop_SuMu: conserved possible DNA-binding protein; HSM_0665; phage(gi418489059) | 2e-60 | Click |
| 23 | 759800..761443 | PHAGE_Haemop_SuMu: terminase; HSM_0666; phage(gi418489081) | 0.0 | Click |
| 24 | 761447..763105 | PHAGE_Haemop_SuMu: portal protein gp29; HSM_0667; phage(gi418489080) | 0.0 | Click |
| 25 | 763092..764366 | PHAGE_Haemop_SuMu: MuF; HSM_0668; phage(gi418489084) | 7e-129 | Click |
| 26 | 764940..765425 | PHAGE_Haemop_SuMu: Mu-like prophage protein gpG; HSM_0669; phage(gi418489082) | 4e-36 | Click |
| 27 | 765686..766726 | PHAGE_Haemop_SuMu: bacteriophage Mu I protein gp32; HSM_0670; phage(gi418489085) | 3e-75 | Click |
| 28 | 766731..767657 | PHAGE_Haemop_SuMu: gpT; HSM_0671; phage(gi418489086) | 4e-109 | Click |
| 29 | 767701..768171 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0672; phage(gi418489061) | 9e-23 | Click |
| 30 | 768174..768608 | PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; HSM_0673; phage(gi418489087) | 6e-38 | Click |
| 31 | 768520..769233 | PHAGE_Haemop_SuMu: Mu-like prophage protein gp37; HSM_0674; phage(gi418489088) | 1e-49 | Click |
| 32 | 769230..769412 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0675; phage(gi418489089) | 3e-12 | Click |
| 33 | 769405..770820 | PHAGE_Haemop_SuMu: tail sheath protein gpL; HSM_0676; phage(gi418489090) | 1e-161 | Click |
| 34 | 770830..771204 | PHAGE_Haemop_SuMu: tail tube protein; HSM_0677; phage(gi418489063) | 2e-40 | Click |
| 35 | 771204..771575 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0678; phage(gi418489064) | 2e-16 | Click |
| 36 | 771838..774255 | PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; HSM_0679; phage(gi418489066) | 2e-83 | Click |
| 37 | 774258..775589 | PHAGE_Haemop_SuMu: DNA circulation protein; HSM_0680; phage(gi418489067) | 8e-115 | Click |
| 38 | 775579..776724 | PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; HSM_0681; phage(gi418489068) | 2e-147 | Click |
| 39 | 776724..777380 | PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; HSM_0682; phage(gi418489069) | 2e-82 | Click |
| 40 | 777459..777809 | PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; HSM_0683; phage(gi418489070) | 3e-46 | Click |
| 41 | 777823..778887 | PHAGE_Haemop_SuMu: baseplate J family protein gp47; HSM_0684; phage(gi418489071) | 9e-129 | Click |
| 42 | 778887..779474 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0685; phage(gi418489072) | 1e-69 | Click |
| 43 | 779478..781436 | PHAGE_Haemop_SuMu: putative phage-related tail fiber protein; HSM_0686; phage(gi418489073) | 3e-15 | Click |
| 44 | 781433..782047 | PHAGE_Haemop_SuMu: putative tail fiber assembly protein; HSM_0687; phage(gi418489074) | 2e-47 | Click |
| 45 | 782040..782534 | PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; HSM_0688; phage(gi418489075) | 6e-49 | Click |
| 46 | 782902..783660 | PHAGE_Strept_phiNJ2: putative C-5 cytosine-specific DNA methylase; HSM_0689; phage(gi414090243) | 7e-61 | Click |
| 47 | 783647..784483 | PHAGE_Haemop_SuMu: hypothetical protein; HSM_0690; phage(gi418489077) | 5e-106 | Click |
| 48 | complement(784504..784692) | hypothetical protein; HSM_0691 | N/A | Click |
| 49 | complement(784696..785010) | hypothetical protein; HSM_0692 | N/A | Click |
| 50 | complement(785160..786344) | PHAGE_Plankt_PaV_LD: ABC transporter; HSM_0693; phage(gi371496158) | 2e-16 | Click |
Region 3, total : 35 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1006960..1007799) | PHAGE_Aggreg_S1249: putative antirepressor protein Ant; HSM_0868; phage(gi273809579) | 2e-32 | Click |
| 2 | complement(1008591..1009388) | hypothetical protein; HSM_0869 | N/A | Click |
| 3 | 1009789..1009974 | PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p49; HSM_0870; phage(gi109289984) | 2e-12 | Click |
| 4 | 1010153..1010518 | hypothetical protein; HSM_0871 | N/A | Click |
| 5 | complement(1010620..1011249) | PHAGE_Entero_HK629: hypothetical protein; HSM_0872; phage(gi428782050) | 3e-33 | Click |
| 6 | complement(1011246..1011908) | PHAGE_Entero_HK629: hypothetical protein; HSM_0873; phage(gi428782051) | 1e-60 | Click |
| 7 | complement(1011972..1012604) | PHAGE_Entero_SfV: hypothetical protein SfVp44; HSM_0874; phage(gi19549031) | 6e-16 | Click |
| 8 | complement(1012882..1013709) | PHAGE_Riemer_RAP44: DNA-damage-inducible protein D; HSM_0875; phage(gi418489887) | 1e-46 | Click |
| 9 | complement(1014768..1014989) | hypothetical protein; HSM_0876 | N/A | Click |
| 10 | 1015001..1015189 | PHAGE_Mycoba_Troll4: gp41; HSM_0877; phage(gi206599836) | 3e-09 | Click |
| 11 | 1015606..1015902 | PHAGE_Burkho_2: gp7, putative addiction module killer protein; HSM_0878; phage(gi134288691) | 4e-21 | Click |
| 12 | 1015904..1016200 | PHAGE_Burkho_2: gp6, putative addiction module antidote protein; HSM_0879; phage(gi134288715) | 4e-18 | Click |
| 13 | complement(1016228..1017232) | hypothetical protein; HSM_0880 | N/A | Click |
| 14 | complement(1017329..1018015) | PHAGE_Stx2_c_I: CI protein; HSM_0881; phage(gi20065916) | 2e-21 | Click |
| 15 | 1018118..1018345 | PHAGE_Escher_HK75: regulatory protein cro; HSM_0882; phage(gi356870715) | 1e-10 | Click |
| 16 | 1018498..1018737 | PHAGE_Sulfit_pCB2047_C: hypothetical protein; HSM_0883; phage(gi472341794) | 3e-13 | Click |
| 17 | 1018727..1019551 | PHAGE_Aggreg_S1249: replication protein; HSM_0884; phage(gi273809588) | 9e-20 | Click |
| 18 | 1019548..1020240 | PHAGE_Aggreg_S1249: possible bacteriophage replication protein P; HSM_0885; phage(gi273809587) | 2e-34 | Click |
| 19 | 1020255..1020788 | PHAGE_Aggreg_S1249: DNA adenine methylase; HSM_0886; phage(gi273809586) | 1e-20 | Click |
| 20 | 1020801..1021253 | PHAGE_Escher_TL_2011c: hypothetical protein; HSM_0887; phage(gi418487093) | 5e-46 | Click |
| 21 | complement(1021305..1021919) | PHAGE_Aggreg_S1249: possible bacteriophage antirepressor; HSM_0888; phage(gi273809598) | 7e-31 | Click |
| 22 | complement(1022474..1022887) | PHAGE_Haemop_HP2: hypothetical protein HP2p14; HSM_0889; phage(gi17981828) | 1e-35 | Click |
| 23 | complement(1022910..1023125) | PHAGE_Haemop_HP2: hypothetical protein HP2p13; HSM_0890; phage(gi19289355) | 2e-12 | Click |
| 24 | 1023286..1023864 | PHAGE_Aggreg_S1249: NinG recombination protein; HSM_0891; phage(gi273809581) | 8e-58 | Click |
| 25 | complement(1024492..1024896) | hypothetical protein; HSM_0892 | N/A | Click |
| 26 | 1025178..1025414 | hypothetical protein; HSM_0893 | N/A | Click |
| 27 | 1025404..1025943 | PHAGE_Mannhe_phiMHaA1: endolysin; HSM_0894; phage(gi109289945) | 4e-47 | Click |
| 28 | 1025916..1026245 | PHAGE_Aggreg_S1249: putative lytic protein Rz; HSM_0895; phage(gi273809574) | 2e-05 | Click |
| 29 | 1026442..1027137 | PHAGE_Escher_TL_2011c: putative terminase small subunit; HSM_0896; phage(gi418487072) | 6e-18 | Click |
| 30 | 1027137..1028684 | PHAGE_Burkho_BcepC6B: putative TerL; HSM_0897; phage(gi48697193) | 7e-78 | Click |
| 31 | 1028686..1030863 | PHAGE_Human__8: LANA; HSM_0898; phage(gi139472804) | 1e-05 | Click |
| 32 | 1031022..1031120 | hypothetical protein; HSM_0899 | N/A | Click |
| 33 | 1031495..1031683 | hypothetical protein; HSM_0900 | N/A | Click |
| 34 | 1032458..1033333 | PHAGE_Aggreg_S1249: putative antirepressor protein Ant; HSM_0901; phage(gi273809579) | 3e-38 | Click |
| 35 | 1033403..1036102 | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp35; HSM_0902; phage(gi116222027) | 2e-18 | Click |
Region 4, total : 41 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1295897..1298752) | PHAGE_Bacill_SP10: DNA polymerase; HSM_1127; phage(gi418489633) | 4e-68 | Click |
| 2 | 1298960..1300972 | PHAGE_Bacill_36: PcrA helicase; HSM_1128; phage(gi156564011) | 4e-117 | Click |
| 3 | 1301094..1301187 | tRNA | N/A | Click |
| 4 | 1301198..1301274 | tRNA | N/A | Click |
| 5 | 1301285..1301296 | attL TGATTTTATTGA | N/A | Click |
| 6 | 1301351..1301427 | tRNA | N/A | Click |
| 7 | 1301649..1302638 | PHAGE_Mannhe_phiMHaA1: integrase; HSM_1129; phage(gi109289985) | 4e-87 | Click |
| 8 | complement(1302635..1302931) | PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p48; HSM_1130; phage(gi109289983) | 7e-13 | Click |
| 9 | complement(1302900..1305263) | PHAGE_Mannhe_phiMHaA1: replication protein A; HSM_1131; phage(gi109289978) | 4e-103 | Click |
| 10 | complement(1305282..1305575) | PHAGE_Haemop_HP2: hypothetical protein HP2p08; HSM_1132; phage(gi17981823) | 3e-07 | Click |
| 11 | complement(1305572..1305925) | hypothetical protein; HSM_1133 | N/A | Click |
| 12 | complement(1305941..1306231) | hypothetical protein; HSM_1134 | N/A | Click |
| 13 | complement(1306630..1306875) | PHAGE_Mannhe_phiMHaA1: Cro repressor; HSM_1135; phage(gi109289971) | 5e-11 | Click |
| 14 | 1307015..1307704 | PHAGE_Mannhe_phiMHaA1: CI repressor; HSM_1136; phage(gi109289970) | 1e-35 | Click |
| 15 | complement(1307987..1309162) | PHAGE_Mannhe_phiMHaA1: tail protein D; HSM_1137; phage(gi109289965) | 2e-106 | Click |
| 16 | complement(1309159..1309602) | PHAGE_Mannhe_phiMHaA1: tail protein U; HSM_1138; phage(gi109289964) | 3e-42 | Click |
| 17 | complement(1309807..1310115) | PROPHAGE_Salmon_Ty2: putative phage tail protein; HSM_1139; phage(gi29143760) | 1e-15 | Click |
| 18 | complement(1310143..1310652) | PHAGE_Mannhe_phiMHaA1: tail tube protein FII; HSM_1140; phage(gi109289961) | 1e-48 | Click |
| 19 | complement(1310663..1311916) | PHAGE_Ralsto_phiRSA1: major tail seath protein gpFI; HSM_1141; phage(gi145708101) | 3e-139 | Click |
| 20 | 1312129..1312377 | hypothetical protein; HSM_1142 | N/A | Click |
| 21 | 1312377..1312640 | addiction module antitoxin; HSM_1143 | N/A | Click |
| 22 | 1312855..1313043 | PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p49; HSM_1144; phage(gi109289984) | 7e-08 | Click |
| 23 | complement(1313046..1313522) | PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; HSM_1145; phage(gi418489075) | 5e-45 | Click |
| 24 | complement(1313515..1314141) | PHAGE_Haemop_SuMu: putative tail fiber assembly protein; HSM_1146; phage(gi418489074) | 4e-63 | Click |
| 25 | 1314204..1314455 | hypothetical protein; HSM_1147 | N/A | Click |
| 26 | 1314439..1314756 | hypothetical protein; HSM_1148 | N/A | Click |
| 27 | complement(1314792..1316891) | PHAGE_Mannhe_phiMHaA1: variable tail fiber protein H; HSM_1149; phage(gi109289958) | 4e-40 | Click |
| 28 | complement(1316937..1317491) | PHAGE_Mannhe_phiMHaA1: tail formation protein I; HSM_1150; phage(gi109289957) | 2e-53 | Click |
| 29 | complement(1317481..1318395) | PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; HSM_1151; phage(gi109289956) | 3e-103 | Click |
| 30 | complement(1318379..1318735) | PHAGE_Mannhe_phiMHaA1: baseplate assembly protein W; HSM_1152; phage(gi109289955) | 7e-21 | Click |
| 31 | complement(1318735..1319361) | PHAGE_Mannhe_phiMHaA1: baseplate assembly protein V; HSM_1153; phage(gi109289954) | 4e-42 | Click |
| 32 | complement(1319575..1319922) | hypothetical protein; HSM_1154 | N/A | Click |
| 33 | complement(1319910..1320194) | hypothetical protein; HSM_1155 | N/A | Click |
| 34 | complement(1320349..1322847) | PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; HSM_1156; phage(gi428782750) | 2e-88 | Click |
| 35 | 1323415..1323426 | attR TGATTTTATTGA | N/A | Click |
| 36 | complement(1323613..1324074) | PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; HSM_1157; phage(gi109289949) | 7e-43 | Click |
| 37 | complement(1324087..1324527) | PHAGE_Mannhe_phiMHaA1: tail completion protein R; HSM_1158; phage(gi109289948) | 2e-25 | Click |
| 38 | complement(1324885..1325343) | PHAGE_Mannhe_phiMHaA1: hypothetical bacteriophage protein; HSM_1159; phage(gi109289946) | 1e-08 | Click |
| 39 | complement(1325327..1325863) | PHAGE_Mannhe_phiMHaA1: endolysin; HSM_1160; phage(gi109289945) | 3e-43 | Click |
| 40 | complement(1325856..1326080) | PHAGE_Mannhe_phiMHaA1: possible holin; HSM_1161; phage(gi109289944) | 3e-07 | Click |
| 41 | complement(1326081..1326296) | PHAGE_Mannhe_phiMHaA1: tail synthesis protein X; HSM_1162; phage(gi109289943) | 3e-14 | Click |
| 42 | complement(1326296..1326808) | PHAGE_Mannhe_phiMHaA1: head completion protein L; HSM_1163; phage(gi109289942) | 1e-46 | Click |
| 43 | complement(1326912..1327565) | PHAGE_Mannhe_phiMHaA1: terminase small subunit; HSM_1164; phage(gi109289941) | 7e-40 | Click |
| 44 | complement(1327577..1328629) | PHAGE_Mannhe_phiMHaA1: major capsid protein N; HSM_1165; phage(gi109289940) | 1e-92 | Click |
| 45 | complement(1328653..1329477) | PHAGE_Mannhe_phiMHaA1: capsid scaffolding protein O; HSM_1166; phage(gi109289939) | 7e-72 | Click |
| 46 | 1329641..1329985 | PHAGE_Mannhe_phiMHaA1: terminase ATPase subunit; HSM_1167; phage(gi109289938) | 7e-34 | Click |