| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 39 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 232521..233066 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp086; YPK_0180; phage(gi56693134) | 2e-05 | Click |
| 2 | complement(233187..233942) | PHAGE_Vibrio_VP882: DNA adenine methylase; YPK_0181; phage(gi126010878) | 2e-97 | Click |
| 3 | complement(234074..234511) | PHAGE_Bacter_2: tail fiber; YPK_0182; phage(gi212499733) | 2e-14 | Click |
| 4 | complement(234521..235747) | PHAGE_Haemop_SuMu: putative phage-related tail fiber protein; YPK_0183; phage(gi418489073) | 6e-10 | Click |
| 5 | complement(235750..236319) | PHAGE_Haemop_SuMu: hypothetical protein; YPK_0184; phage(gi418489072) | 2e-33 | Click |
| 6 | complement(236316..237377) | PHAGE_Haemop_SuMu: baseplate J family protein gp47; YPK_0185; phage(gi418489071) | 5e-79 | Click |
| 7 | complement(237377..237721) | PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; YPK_0186; phage(gi418489070) | 4e-26 | Click |
| 8 | complement(237782..238432) | PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; YPK_0187; phage(gi418489069) | 5e-57 | Click |
| 9 | complement(238422..239645) | PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; YPK_0188; phage(gi418489068) | 2e-71 | Click |
| 10 | complement(239629..240948) | PHAGE_Haemop_SuMu: DNA circulation protein; YPK_0189; phage(gi418489067) | 2e-40 | Click |
| 11 | complement(240950..243157) | PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; YPK_0190; phage(gi418489066) | 4e-114 | Click |
| 12 | complement(243157..243291) | hypothetical protein; YPK_0191 | N/A | Click |
| 13 | complement(243312..243479) | hypothetical protein; YPK_0192 | N/A | Click |
| 14 | complement(243595..243792) | hypothetical protein; YPK_0193 | N/A | Click |
| 15 | complement(243785..244285) | PHAGE_Pseudo_JBD24: hypothetical protein; YPK_0194; phage(gi448245073) | 3e-54 | Click |
| 16 | complement(244288..244575) | hypothetical protein; YPK_0195 | N/A | Click |
| 17 | complement(244572..244814) | hypothetical protein; YPK_0196 | N/A | Click |
| 18 | complement(244811..245398) | hypothetical protein; YPK_0197 | N/A | Click |
| 19 | complement(245376..245630) | hypothetical protein; YPK_0198 | N/A | Click |
| 20 | complement(245621..246259) | PHAGE_Cronob_ENT47670: putative endolysin; YPK_0199; phage(gi431810515) | 5e-66 | Click |
| 21 | complement(246351..246620) | hypothetical protein; YPK_0200 | N/A | Click |
| 22 | complement(246632..247069) | PHAGE_Pseudo_JBD24: hypothetical protein; YPK_0201; phage(gi448245065) | 7e-18 | Click |
| 23 | complement(247066..247467) | PHAGE_Pseudo_DMS3: hypothetical protein DMS3-18; YPK_0202; phage(gi119953643) | 4e-24 | Click |
| 24 | complement(247452..247925) | hypothetical protein; YPK_0203 | N/A | Click |
| 25 | complement(247918..248310) | PHAGE_Pectob_ZF40: hypothetical protein; YPK_0204; phage(gi422936662) | 2e-12 | Click |
| 26 | complement(248303..248512) | hypothetical protein; YPK_0205 | N/A | Click |
| 27 | complement(248512..249054) | PHAGE_Salmon_SSU5: hypothetical protein; YPK_0206; phage(gi410491510) | 3e-49 | Click |
| 28 | complement(249044..249286) | hypothetical protein; YPK_0207 | N/A | Click |
| 29 | complement(249283..249504) | hypothetical protein; YPK_0208 | N/A | Click |
| 30 | complement(249501..250001) | hypothetical protein; YPK_0209 | N/A | Click |
| 31 | complement(250001..250699) | PHAGE_Pseudo_B3: hypothetical protein B3ORF5; YPK_0210; phage(gi56692573) | 6e-21 | Click |
| 32 | complement(250782..250973) | hypothetical protein; YPK_0211 | N/A | Click |
| 33 | complement(250975..251613) | PHAGE_Burkho_BcepMu: gp05; YPK_0212; phage(gi48696915) | 2e-72 | Click |
| 34 | complement(251603..251803) | hypothetical protein; YPK_0213 | N/A | Click |
| 35 | complement(251810..252043) | hypothetical protein; YPK_0214 | N/A | Click |
| 36 | complement(252062..252952) | PHAGE_Haemop_SuMu: phage transposase; YPK_0215; phage(gi418489040) | 2e-61 | Click |
| 37 | complement(252995..255049) | PHAGE_Haemop_SuMu: phage transposase; YPK_0216; phage(gi418489038) | 2e-140 | Click |
| 38 | complement(255051..255296) | PHAGE_Haemop_SuMu: Mu-like prophage FluMu DNA-binding protein Ner; YPK_0217; phage(gi418489037) | 1e-13 | Click |
| 39 | 255478..256041 | PHAGE_Pseudo_JBD88a: hypothetical protein; YPK_0218; phage(gi448244687) | 3e-05 | Click |
Region 2, total : 45 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 991968..991979 | attL TAAGGAATAGCA | N/A | Click |
| 2 | 1005158..1006591 | PHAGE_Ectoca_1: EsV-1-65; YPK_0879; phage(gi13242537) | 7e-11 | Click |
| 3 | 1006676..1008133 | hypothetical protein; YPK_0880 | N/A | Click |
| 4 | complement(1008218..1008736) | flavodoxin FldB; YPK_0881 | N/A | Click |
| 5 | complement(1008807..1009748) | PHAGE_Erwini_ENT90: phage integrase family protein; YPK_0882; phage(gi431810942) | 2e-80 | Click |
| 6 | complement(1009883..1010446) | PHAGE_Haemop_HP2: cI repressor; YPK_0883; phage(gi17981818) | 1e-20 | Click |
| 7 | 1010585..1010815 | hypothetical protein; YPK_0884 | N/A | Click |
| 8 | 1010818..1011351 | PHAGE_Entero_2: bacteriophage regulatory protein CII; YPK_0885; phage(gi169936061) | 1e-47 | Click |
| 9 | 1011361..1011546 | PHAGE_Salmon_RE_2010: cell division blocking protein; YPK_0886; phage(gi418489687) | 8e-06 | Click |
| 10 | 1011558..1011875 | gpB bacteriophage P2-like protein; YPK_0887 | N/A | Click |
| 11 | 1011942..1012814 | PHAGE_Salmon_RE_2010: DNA adenine methyltransferase; YPK_0888; phage(gi418489691) | 6e-73 | Click |
| 12 | 1012853..1013080 | PHAGE_Entero_2: hypothetical protein STM2732.Fels2; YPK_0889; phage(gi169936057) | 8e-06 | Click |
| 13 | 1013092..1013364 | PHAGE_Entero_P2: hypothetical protein P2p39; YPK_0890; phage(gi9630365) | 4e-16 | Click |
| 14 | 1013368..1014372 | PHAGE_Stenot_S1: putative PAPS; YPK_0891; phage(gi213163929) | 4e-62 | Click |
| 15 | 1014369..1016648 | PHAGE_Yersin_413C: gpA; YPK_0892; phage(gi30065742) | 0.0 | Click |
| 16 | 1016641..1017027 | PHAGE_Pectob_ZF40: hypothetical protein; YPK_0893; phage(gi422936662) | 3e-22 | Click |
| 17 | 1017227..1017442 | PHAGE_Salmon_RE_2010: hypothetical protein; YPK_0894; phage(gi418489693) | 1e-06 | Click |
| 18 | complement(1017419..1017685) | PHAGE_Vibrio_kappa: hypothetical zinc-finger protein; YPK_0895; phage(gi165970253) | 9e-19 | Click |
| 19 | complement(1017736..1018761) | PHAGE_Haemop_HP2: orf15; YPK_0896; phage(gi17981829) | 2e-93 | Click |
| 20 | complement(1018758..1020545) | PHAGE_Haemop_HP2: terminase; YPK_0897; phage(gi17981830) | 0.0 | Click |
| 21 | 1020712..1021566 | PHAGE_Haemop_HP2: scaffold; YPK_0898; phage(gi17981831) | 6e-38 | Click |
| 22 | 1021621..1022652 | PHAGE_Aeromo_phiO18P: putative major capsid protein; YPK_0899; phage(gi148727153) | 3e-97 | Click |
| 23 | 1022663..1023361 | PHAGE_Haemop_HP2: packaging protein; YPK_0900; phage(gi17981833) | 4e-38 | Click |
| 24 | 1023457..1023909 | PHAGE_Haemop_HP2: packaging protein; YPK_0901; phage(gi17981834) | 5e-23 | Click |
| 25 | 1023906..1024394 | PHAGE_Haemop_HP2: orf21; YPK_0902; phage(gi17981835) | 6e-09 | Click |
| 26 | 1024397..1025068 | PHAGE_Haemop_HP2: orf22; YPK_0903; phage(gi17981836) | 4e-12 | Click |
| 27 | 1025095..1026234 | PHAGE_Haemop_HP2: tail sheath; YPK_0904; phage(gi17981837) | 5e-105 | Click |
| 28 | 1026231..1026683 | PHAGE_Haemop_HP2: tail tube; YPK_0905; phage(gi17981838) | 4e-35 | Click |
| 29 | 1026693..1026983 | PHAGE_Burkho_KS9: holin gp22; YPK_0906; phage(gi255033753) | 1e-19 | Click |
| 30 | 1026935..1027321 | PHAGE_Pseudo_PaP2: hypothetical protein PaP2_gp17; YPK_0907; phage(gi48697087) | 3e-26 | Click |
| 31 | 1027321..1027662 | PHAGE_Erwini_phiEa104: hypothetical protein; YPK_0908; phage(gi327198401) | 4e-10 | Click |
| 32 | 1027812..1028078 | PHAGE_Haemop_HP2: orf26; YPK_0909; phage(gi17981842) | 4e-14 | Click |
| 33 | 1028266..1030242 | PHAGE_Haemop_HP2: orf27; YPK_0910; phage(gi17981843) | 3e-83 | Click |
| 34 | 1030242..1030574 | PHAGE_Haemop_HP2: orf28; YPK_0911; phage(gi17981844) | 4e-28 | Click |
| 35 | 1030567..1031751 | PHAGE_Haemop_HP2: orf29; YPK_0912; phage(gi17981845) | 8e-106 | Click |
| 36 | 1031744..1032379 | PHAGE_Haemop_HP2: orf30; YPK_0913; phage(gi17981846) | 7e-45 | Click |
| 37 | 1032390..1034159 | PHAGE_Haemop_HP2: tail fibers; YPK_0914; phage(gi17981847) | 2e-61 | Click |
| 38 | 1034170..1034598 | PHAGE_Bacter_2: tail fiber; YPK_0915; phage(gi212499733) | 3e-17 | Click |
| 39 | 1034588..1035319 | PHAGE_Haemop_HP2: orf33; YPK_0916; phage(gi17981849) | 4e-16 | Click |
| 40 | 1035285..1035833 | PHAGE_Haemop_HP2: orf34; YPK_0917; phage(gi17981850) | 5e-29 | Click |
| 41 | 1035830..1037485 | PHAGE_Haemop_HP2: orf35; YPK_0918; phage(gi17981851) | 1e-116 | Click |
| 42 | 1037661..1037858 | hypothetical protein; YPK_0919 | N/A | Click |
| 43 | 1038199..1038210 | attR TAAGGAATAGCA | N/A | Click |
| 44 | 1038281..1039180 | PHAGE_Thermu_26: phage XerD-like integrase; YPK_0920; phage(gi157265417) | 7e-16 | Click |
| 45 | 1039211..1039927 | thiol:disulfide interchange protein DsbC; YPK_0921 | N/A | Click |
| 46 | 1039934..1041667 | PHAGE_Bacill_36: RecJ; YPK_0922; phage(gi156564062) | 2e-64 | Click |
| 47 | 1042012..1042944 | PHAGE_Pseudo_73: hypothetical protein ORF037; YPK_0923; phage(gi148912865) | 3e-08 | Click |
Region 3, total : 27 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1033230..1033243 | attL GATAAAGCCATTGA | N/A | Click |
| 2 | 1044904..1046118 | PROPHAGE_Escher_CFT073: putative prophage integrase; YPK_0925; phage(gi26250313) | 2e-156 | Click |
| 3 | complement(1046941..1048638) | PHAGE_Haemop_HP2: orf35; YPK_0926; phage(gi17981851) | 3e-113 | Click |
| 4 | complement(1048635..1049189) | PHAGE_Haemop_HP2: orf34; YPK_0927; phage(gi17981850) | 2e-26 | Click |
| 5 | complement(1049182..1049892) | PHAGE_Haemop_HP2: orf33; YPK_0928; phage(gi17981849) | 1e-18 | Click |
| 6 | complement(1049889..1050407) | PHAGE_Escher_D108: probable tail fiber assembly protein; YPK_0929; phage(gi281199695) | 1e-18 | Click |
| 7 | complement(1050407..1052002) | PHAGE_Haemop_HP2: tail fibers; YPK_0930; phage(gi17981847) | 4e-48 | Click |
| 8 | complement(1052012..1052635) | PHAGE_Haemop_HP2: orf30; YPK_0931; phage(gi17981846) | 1e-42 | Click |
| 9 | complement(1052628..1053812) | PHAGE_Haemop_HP2: orf29; YPK_0932; phage(gi17981845) | 2e-110 | Click |
| 10 | complement(1053809..1054138) | PHAGE_Haemop_HP2: orf28; YPK_0933; phage(gi17981844) | 3e-31 | Click |
| 11 | complement(1054135..1054293) | putative bacteriophage tail protein; YPK_0934 | N/A | Click |
| 12 | complement(1054290..1054580) | PHAGE_Haemop_HP2: tail tube; YPK_0935; phage(gi17981838) | 2e-22 | Click |
| 13 | complement(1054583..1055749) | PHAGE_Haemop_HP2: tail sheath; YPK_0936; phage(gi17981837) | 1e-85 | Click |
| 14 | complement(1055746..1056447) | PHAGE_Haemop_HP2: orf22; YPK_0937; phage(gi17981836) | 2e-08 | Click |
| 15 | complement(1056407..1056913) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; YPK_0938; phage(gi148727156) | 2e-10 | Click |
| 16 | complement(1056910..1057362) | PHAGE_Haemop_HP2: packaging protein; YPK_0939; phage(gi17981834) | 7e-24 | Click |
| 17 | complement(1057482..1058225) | PHAGE_Haemop_HP2: packaging protein; YPK_0940; phage(gi17981833) | 2e-40 | Click |
| 18 | complement(1058243..1059415) | PHAGE_Aeromo_phiO18P: putative major capsid protein; YPK_0941; phage(gi148727153) | 3e-74 | Click |
| 19 | complement(1059498..1060433) | PHAGE_Haemop_HP2: scaffold; YPK_0942; phage(gi17981831) | 2e-39 | Click |
| 20 | 1060611..1062704 | PHAGE_Haemop_HP2: terminase; YPK_0943; phage(gi17981830) | 4e-170 | Click |
| 21 | 1062691..1063056 | PHAGE_Haemop_HP2: orf15; YPK_0944; phage(gi17981829) | 6e-22 | Click |
| 22 | complement(1062998..1063819) | PHAGE_Entero_P4: DNA primase; YPK_0945; phage(gi9627512) | 4e-38 | Click |
| 23 | 1064119..1064445 | hypothetical protein; YPK_0946 | N/A | Click |
| 24 | 1064438..1064590 | hypothetical protein; YPK_0947 | N/A | Click |
| 25 | complement(1064604..1064804) | PHAGE_Entero_P4: transcriptional regulator; YPK_0948; phage(gi9627517) | 3e-08 | Click |
| 26 | complement(1064986..1065642) | hypothetical protein; YPK_0949 | N/A | Click |
| 27 | complement(1065655..1066020) | hypothetical protein; YPK_0950 | N/A | Click |
| 28 | 1066289..1067431 | PHAGE_Brocho_BL3: gp26; YPK_0951; phage(gi327409418) | 5e-14 | Click |
| 29 | 1081858..1081871 | attR GATAAAGCCATTGA | N/A | Click |
Region 4, total : 49 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1331575..1332966) | PHAGE_Acyrth_1: hypothetical protein APSE-1_41; YPK_1197; phage(gi9633588) | 0.0 | Click |
| 2 | complement(1333013..1333840) | PHAGE_Entero_HK633: DNA-binding protein; YPK_1198; phage(gi428782577) | 1e-33 | Click |
| 3 | complement(1333815..1333997) | hypothetical protein; YPK_1199 | N/A | Click |
| 4 | 1334124..1334435 | Arc domain-containing protein; YPK_1200 | N/A | Click |
| 5 | complement(1334438..1334575) | Arc domain-containing protein; YPK_1201 | N/A | Click |
| 6 | complement(1334572..1334841) | PHAGE_Bacter_2: hypothetical protein APSE235; YPK_1202; phage(gi212499740) | 8e-31 | Click |
| 7 | complement(1334825..1335055) | PHAGE_Haemop_SuMu: hypothetical protein; YPK_1203; phage(gi418489044) | 3e-06 | Click |
| 8 | complement(1335060..1337141) | PHAGE_Bordet_1: Bbp42; YPK_1204; phage(gi41179402) | 0.0 | Click |
| 9 | complement(1337238..1338017) | PHAGE_Burkho_DC1: hypothetical protein; YPK_1205; phage(gi401723024) | 2e-34 | Click |
| 10 | complement(1338075..1338452) | PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp10; YPK_1206; phage(gi238801626) | 9e-13 | Click |
| 11 | complement(1338505..1339053) | PHAGE_Bacter_2: hypothetical protein APSE240; YPK_1207; phage(gi212499744) | 3e-54 | Click |
| 12 | complement(1339066..1340376) | PHAGE_Acyrth_1: hypothetical protein APSE-1_51; YPK_1208; phage(gi9633598) | 1e-129 | Click |
| 13 | complement(1340379..1341113) | PHAGE_Acyrth_1: hypothetical protein APSE-1_53; YPK_1209; phage(gi9633600) | 1e-18 | Click |
| 14 | complement(1341572..1342201) | PHAGE_Entero_mEpX1: prophage repressor; YPK_1210; phage(gi428781915) | 7e-37 | Click |
| 15 | 1342347..1342562 | PHAGE_Entero_mEp213: prophage anti-repressor; YPK_1211; phage(gi428782642) | 4e-21 | Click |
| 16 | 1342566..1344743 | PHAGE_Bacter_2: predicted P-loop ATPase; YPK_1212; phage(gi212499708) | 4e-104 | Click |
| 17 | 1345022..1345234 | hypothetical protein; YPK_1213 | N/A | Click |
| 18 | 1345316..1345741 | PHAGE_Bacter_2: Q protein; YPK_1214; phage(gi212499710) | 5e-20 | Click |
| 19 | 1346113..1346493 | PHAGE_Pseudo_F10: Putative Holin; YPK_1215; phage(gi148912825) | 2e-08 | Click |
| 20 | complement(1346756..1347187) | hypothetical protein; YPK_1216 | N/A | Click |
| 21 | 1347392..1347724 | PHAGE_Erwini_phiEt88: holin; YPK_1217; phage(gi327198627) | 2e-18 | Click |
| 22 | 1347711..1348106 | PHAGE_Entero_phiP27: putative endolysin; YPK_1218; phage(gi18249894) | 3e-46 | Click |
| 23 | 1348103..1348480 | PHAGE_Bacter_2: hypothetical protein APSE213; YPK_1219; phage(gi212499718) | 1e-10 | Click |
| 24 | 1348700..1349251 | PHAGE_Entero_epsilon15: terminase small subunit; YPK_1220; phage(gi30387380) | 7e-44 | Click |
| 25 | complement(1349275..1349634) | XRE family transcriptional regulator; YPK_1221 | N/A | Click |
| 26 | 1350090..1351694 | PHAGE_Burkho_BcepB1A: gp33 TerL; YPK_1222; phage(gi48697520) | 5e-154 | Click |
| 27 | 1351947..1353485 | PHAGE_Burkho_BcepB1A: gp28; YPK_1223; phage(gi48697517) | 8e-119 | Click |
| 28 | 1353442..1354323 | PHAGE_Burkho_BcepB1A: gp27; YPK_1224; phage(gi48697516) | 4e-55 | Click |
| 29 | 1354316..1355464 | PHAGE_Burkho_BcepB1A: gp26; YPK_1225; phage(gi48697515) | 2e-65 | Click |
| 30 | 1355464..1355955 | PHAGE_Burkho_BcepB1A: gp24; YPK_1226; phage(gi48697514) | 2e-20 | Click |
| 31 | 1355969..1357102 | PHAGE_Burkho_BcepB1A: gp23; YPK_1227; phage(gi48697513) | 4e-92 | Click |
| 32 | 1357161..1357529 | PHAGE_Burkho_BcepB1A: gp22; YPK_1228; phage(gi48697512) | 5e-12 | Click |
| 33 | 1357539..1357970 | PHAGE_Pseudo_SN: structural protein; YPK_1229; phage(gi218457828) | 3e-27 | Click |
| 34 | 1357970..1358467 | PHAGE_Burkho_BcepB1A: gp20; YPK_1230; phage(gi48697510) | 2e-15 | Click |
| 35 | 1358467..1358850 | PHAGE_Burkho_BcepB1A: gp19; YPK_1231; phage(gi48697509) | 1e-15 | Click |
| 36 | 1358840..1359379 | PHAGE_Burkho_BcepB1A: gp18; YPK_1232; phage(gi48697508) | 9e-10 | Click |
| 37 | 1359392..1360906 | PHAGE_Pseudo_LBL3: putative structural protein; YPK_1233; phage(gi197261356) | 6e-93 | Click |
| 38 | 1360918..1361358 | PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.110; YPK_1234; phage(gi126011044) | 9e-40 | Click |
| 39 | 1361358..1361813 | PHAGE_Burkho_BcepB1A: gp15 E; YPK_1235; phage(gi48697505) | 1e-35 | Click |
| 40 | 1361899..1363470 | PHAGE_Burkho_BcepB1A: gp14 T; YPK_1236; phage(gi72257065) | 5e-49 | Click |
| 41 | 1363470..1363979 | PHAGE_Burkho_BcepB1A: gp13; YPK_1237; phage(gi48697561) | 8e-25 | Click |
| 42 | 1363981..1364283 | PHAGE_Burkho_BcepB1A: gp12; YPK_1238; phage(gi48697560) | 2e-11 | Click |
| 43 | 1364287..1365126 | PHAGE_Burkho_BcepB1A: gp11; YPK_1239; phage(gi48697559) | 1e-53 | Click |
| 44 | 1365108..1365785 | PHAGE_Burkho_BcepB1A: gp10 V; YPK_1240; phage(gi48697558) | 3e-44 | Click |
| 45 | 1365782..1366141 | PHAGE_Burkho_BcepB1A: gp09; YPK_1241; phage(gi48697557) | 2e-22 | Click |
| 46 | 1366125..1367324 | PHAGE_Burkho_BcepB1A: gp08 W; YPK_1242; phage(gi48697556) | 1e-88 | Click |
| 47 | 1367390..1369201 | PHAGE_Burkho_BcepB1A: gp07; YPK_1243; phage(gi48697555) | 1e-36 | Click |
| 48 | 1369205..1369426 | hypothetical protein; YPK_1244 | N/A | Click |
| 49 | 1369419..1371200 | PHAGE_Burkho_BcepB1A: gp05 H; YPK_1245; phage(gi48697553) | 2e-31 | Click |
Region 5, total : 68 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2538245..2538349) | PROPHAGE_Salmon_LT2: transposase; YPK_2286; phage(gi16766077) | 1e-06 | Click |
| 2 | complement(2538403..2538609) | PHAGE_Entero_Sf6: putative transposase OrfB; YPK_2287; phage(gi41057343) | 1e-22 | Click |
| 3 | 2539027..2539461 | hypothetical protein; YPK_2288 | N/A | Click |
| 4 | 2539473..2540042 | hypothetical protein; YPK_2289 | N/A | Click |
| 5 | 2540230..2540403 | hypothetical protein; YPK_2290 | N/A | Click |
| 6 | complement(2540460..2540798) | PROPHAGE_Escher_CFT073: transposase; YPK_2291; phage(gi26246249) | 2e-56 | Click |
| 7 | complement(2540798..2541658) | PROPHAGE_Escher_CFT073: transposase; YPK_2292; phage(gi26246249) | 4e-139 | Click |
| 8 | complement(2541706..2542782) | hypothetical protein; YPK_2293 | N/A | Click |
| 9 | complement(2542848..2543138) | PHAGE_Burkho_phiE202: gp7, pANL12; YPK_2294; phage(gi134288781) | 3e-07 | Click |
| 10 | complement(2543140..2543391) | PHAGE_Burkho_phiE202: gp6, pANL56; YPK_2295; phage(gi134288760) | 3e-11 | Click |
| 11 | 2543422..2543781 | PHAGE_Salmon_RE_2010: baseplate assembly protein V; YPK_2296; phage(gi418489709) | 9e-19 | Click |
| 12 | 2543778..2544077 | PHAGE_Salmon_RE_2010: baseplate wedge subunit; YPK_2297; phage(gi418489710) | 3e-25 | Click |
| 13 | 2544818..2545336 | hypothetical protein; YPK_2298 | N/A | Click |
| 14 | 2545317..2545595 | hypothetical protein; YPK_2299 | N/A | Click |
| 15 | 2545760..2546929 | PHAGE_Salmon_RE_2010: major tail sheath protein; YPK_2300; phage(gi418489720) | 4e-177 | Click |
| 16 | 2546941..2547456 | PROPHAGE_Salmon_Ty2: major tail tube protein; YPK_2301; phage(gi29143759) | 4e-59 | Click |
| 17 | 2547510..2547857 | PHAGE_Salmon_RE_2010: tail protein E; YPK_2302; phage(gi418489722) | 7e-21 | Click |
| 18 | 2547886..2547965 | attL GATAACCTTTCACTGGCCGCCCTCCGCTACCGAAGAGATGTCCTTAGGTGAACTTTTAGAGTGGCGACATAAAGCCATTA | N/A | Click |
| 19 | 2547984..2550899 | PHAGE_Salmon_RE_2010: tail tape measure protein; YPK_2303; phage(gi418489724) | 2e-120 | Click |
| 20 | 2550911..2551375 | PHAGE_Salmon_RE_2010: tail protein; YPK_2304; phage(gi418489725) | 1e-49 | Click |
| 21 | 2551372..2552466 | PHAGE_Salmon_RE_2010: gene D protein; YPK_2305; phage(gi418489726) | 2e-135 | Click |
| 22 | 2552541..2552756 | PHAGE_Salmon_RE_2010: OGR regulator of late gene transcription; YPK_2306; phage(gi418489727) | 9e-19 | Click |
| 23 | complement(2553107..2554114) | PHAGE_Salmon_RE_2010: integrase; YPK_2307; phage(gi418489683) | 2e-95 | Click |
| 24 | complement(2554122..2554634) | hypothetical protein; YPK_2308 | N/A | Click |
| 25 | complement(2554696..2555334) | hypothetical protein; YPK_2309 | N/A | Click |
| 26 | complement(2555352..2555744) | PHAGE_Burkho_BcepMu: gp17; YPK_2310; phage(gi48696927) | 3e-25 | Click |
| 27 | 2555823..2556014 | PHAGE_Burkho_phi52237: hypothetical protein BPSphi5223_0015; YPK_2311; phage(gi72537691) | 4e-09 | Click |
| 28 | 2556027..2556230 | PHAGE_Vibrio_kappa: putative regulator; YPK_2312; phage(gi165970239) | 7e-08 | Click |
| 29 | 2556242..2556448 | phage-like protein; YPK_2313 | N/A | Click |
| 30 | 2556445..2556759 | hypothetical protein; YPK_2314 | N/A | Click |
| 31 | 2556744..2556890 | hypothetical protein; YPK_2315 | N/A | Click |
| 32 | 2556901..2557161 | hypothetical protein; YPK_2316 | N/A | Click |
| 33 | 2557192..2557497 | hypothetical protein; YPK_2317 | N/A | Click |
| 34 | 2557580..2558341 | PHAGE_Xantho_CP2: hypothetical protein; YPK_2318; phage(gi448245202) | 6e-11 | Click |
| 35 | 2558398..2559051 | PHAGE_Vibrio_vB_VpaM_MAR: putative exonuclease; YPK_2319; phage(gi428782757) | 8e-57 | Click |
| 36 | 2559048..2559866 | PHAGE_Salmon_RE_2010: DNA adenine methyltransferase; YPK_2320; phage(gi418489691) | 4e-76 | Click |
| 37 | 2559863..2560726 | PHAGE_Burkho_BcepC6B: putative methyl transferase protein; YPK_2321; phage(gi48697223) | 1e-92 | Click |
| 38 | 2560723..2563278 | PHAGE_Salmon_RE_2010: replication protein; YPK_2322; phage(gi418489692) | 5e-128 | Click |
| 39 | 2563259..2563489 | phage-like protein; YPK_2323 | N/A | Click |
| 40 | 2563486..2563830 | PHAGE_Pectob_ZF40: hypothetical protein; YPK_2324; phage(gi422936662) | 3e-20 | Click |
| 41 | complement(2564513..2565544) | PHAGE_Salmon_RE_2010: capsid packaging protein; YPK_2325; phage(gi418489696) | 2e-129 | Click |
| 42 | complement(2565541..2566266) | PHAGE_Entero_PsP3: gp2; YPK_2326; phage(gi41057354) | 2e-32 | Click |
| 43 | complement(2566266..2568029) | PHAGE_Salmon_RE_2010: terminase ATPase subunit; YPK_2327; phage(gi418489697) | 0.0 | Click |
| 44 | 2568200..2569015 | PHAGE_Salmon_RE_2010: capsid scaffolding protein; YPK_2328; phage(gi418489698) | 1e-84 | Click |
| 45 | 2569052..2570107 | PHAGE_Salmon_RE_2010: major capsid protein; YPK_2329; phage(gi418489699) | 3e-126 | Click |
| 46 | 2570114..2570767 | PHAGE_Erwini_ENT90: terminase endonuclease subunit; YPK_2330; phage(gi431810947) | 3e-46 | Click |
| 47 | 2571001..2571492 | PHAGE_Burkho_phiE202: gp48, phage head completion protein (GPL); YPK_2331; phage(gi134288751) | 6e-31 | Click |
| 48 | 2571492..2571695 | PHAGE_Salmon_RE_2010: tail component protein; YPK_2332; phage(gi418489702) | 6e-25 | Click |
| 49 | 2571725..2572111 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; YPK_2333; phage(gi169257295) | 5e-08 | Click |
| 50 | 2572098..2572493 | PHAGE_Pectob_phiTE: endolysin; YPK_2334; phage(gi448244889) | 2e-46 | Click |
| 51 | 2572498..2572920 | PHAGE_Salmon_RE_2010: lysozyme subunit B; YPK_2335; phage(gi418489705) | 5e-28 | Click |
| 52 | 2573019..2573486 | PHAGE_Erwini_ENT90: phage tail completion protein; YPK_2336; phage(gi431810962) | 2e-44 | Click |
| 53 | 2573483..2573929 | PHAGE_Salmon_RE_2010: tail completion protein; YPK_2337; phage(gi418489707) | 3e-37 | Click |
| 54 | complement(2573948..2574178) | hypothetical protein; YPK_2338 | N/A | Click |
| 55 | 2574261..2574962 | hypothetical protein; YPK_2339 | N/A | Click |
| 56 | complement(2575050..2575172) | hypothetical protein; YPK_2340 | N/A | Click |
| 57 | 2575293..2575928 | PHAGE_Erwini_ENT90: baseplate assembly protein; YPK_2341; phage(gi431810950) | 2e-58 | Click |
| 58 | 2575925..2576278 | PHAGE_Erwini_ENT90: baseplate assembly protein; YPK_2342; phage(gi431810974) | 2e-33 | Click |
| 59 | 2576281..2577189 | PHAGE_Salmon_RE_2010: baseplate assembly protein J; YPK_2343; phage(gi418489711) | 4e-112 | Click |
| 60 | 2577182..2577790 | PHAGE_Salmon_RE_2010: tail protein I; YPK_2344; phage(gi418489712) | 2e-70 | Click |
| 61 | 2577787..2579226 | PHAGE_Salmon_RE_2010: tail fiber protein; YPK_2345; phage(gi418489713) | 2e-72 | Click |
| 62 | 2579237..2579716 | PHAGE_Erwini_ENT90: conserved hypothetical tail fiber protein; YPK_2346; phage(gi431810959) | 9e-31 | Click |
| 63 | 2579850..2581025 | PHAGE_Salmon_RE_2010: major tail sheath protein; YPK_2347; phage(gi418489720) | 3e-178 | Click |
| 64 | 2581037..2581552 | PROPHAGE_Salmon_Ty2: major tail tube protein; YPK_2348; phage(gi29143759) | 3e-59 | Click |
| 65 | 2581606..2581953 | PHAGE_Salmon_RE_2010: tail protein E; YPK_2349; phage(gi418489722) | 7e-21 | Click |
| 66 | 2581982..2582061 | attR GATAACCTTTCACTGGCCGCCCTCCGCTACCGAAGAGATGTCCTTAGGTGAACTTTTAGAGTGGCGACATAAAGCCATTA | N/A | Click |
| 67 | 2582080..2584995 | PHAGE_Salmon_RE_2010: tail tape measure protein; YPK_2350; phage(gi418489724) | 2e-123 | Click |
| 68 | 2585007..2585471 | PHAGE_Salmon_RE_2010: tail protein; YPK_2351; phage(gi418489725) | 1e-49 | Click |
| 69 | 2585468..2586562 | PHAGE_Salmon_RE_2010: gene D protein; YPK_2352; phage(gi418489726) | 4e-137 | Click |
| 70 | 2586637..2586852 | PHAGE_Salmon_RE_2010: OGR regulator of late gene transcription; YPK_2353; phage(gi418489727) | 4e-18 | Click |
Region 6, total : 16 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3095683..3096423) | PHAGE_Acanth_moumouvirus: putative glucosamine-fructose-6-phosphate aminotransferase; YPK_2807; phage(gi441432573) | 3e-05 | Click |
| 2 | complement(3096882..3097301) | PHAGE_Entero_SfV: tail fibre assembly protein; YPK_2808; phage(gi19549010) | 4e-13 | Click |
| 3 | complement(3097303..3098019) | PHAGE_Entero_SfV: hypothetical protein SfVp21; YPK_2809; phage(gi19548989) | 3e-17 | Click |
| 4 | complement(3098116..3098718) | PHAGE_Entero_SfV: tail protein; YPK_2810; phage(gi19548988) | 5e-20 | Click |
| 5 | complement(3098715..3099851) | PHAGE_Entero_SfV: tail protein; YPK_2811; phage(gi19549009) | 1e-32 | Click |
| 6 | complement(3099855..3100310) | PHAGE_Entero_SfV: tail protein; YPK_2812; phage(gi19549008) | 5e-14 | Click |
| 7 | complement(3100307..3100903) | PHAGE_Entero_SfV: tail protein; YPK_2813; phage(gi19549007) | 2e-17 | Click |
| 8 | complement(3100919..3101974) | PHAGE_Entero_SfV: tail protein; YPK_2814; phage(gi19549006) | 3e-32 | Click |
| 9 | complement(3101971..3103377) | PHAGE_Entero_SfV: tail/DNA circulation protein; YPK_2815; phage(gi19549005) | 3e-20 | Click |
| 10 | complement(3103644..3105137) | hypothetical protein; YPK_2816 | N/A | Click |
| 11 | complement(3105258..3105557) | putative bacteriophage protein; YPK_2817 | N/A | Click |
| 12 | complement(3105559..3105927) | PHAGE_Entero_SfV: hypothetical protein SfVp12; YPK_2818; phage(gi19549002) | 2e-10 | Click |
| 13 | complement(3105949..3107457) | PHAGE_Entero_SfV: tail sheath protein; YPK_2819; phage(gi19549001) | 5e-106 | Click |
| 14 | complement(3107454..3107648) | PHAGE_Entero_SfV: hypothetical protein SfVp10; YPK_2820; phage(gi19549000) | 1e-06 | Click |
| 15 | complement(3107653..3108270) | hypothetical protein; YPK_2821 | N/A | Click |
| 16 | complement(3108316..3108606) | PHAGE_Salmon_SPN3UB: hypothetical protein; YPK_2822; phage(gi423262443) | 1e-15 | Click |
Region 7, total : 11 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3184958..3185887) | PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; YPK_2888; phage(gi414087138) | 9e-08 | Click |
| 2 | complement(3186303..3186761) | PHAGE_Hypert_2: IS element Dka2 orfA; YPK_2889; phage(gi300116744) | 4e-15 | Click |
| 3 | complement(3186751..3186906) | hypothetical protein; YPK_2890 | N/A | Click |
| 4 | complement(3186972..3187976) | PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; YPK_2891; phage(gi310831360) | 2e-28 | Click |
| 5 | complement(3188633..3188947) | hypothetical protein; YPK_2892 | N/A | Click |
| 6 | complement(3189031..3189198) | hypothetical protein; YPK_2893 | N/A | Click |
| 7 | complement(3189321..3189656) | PHAGE_Shrimp_virus: wsv238; YPK_2894; phage(gi17158342) | 3e-13 | Click |
| 8 | complement(3189690..3189857) | hypothetical protein; YPK_2895 | N/A | Click |
| 9 | complement(3190431..3190664) | PROPHAGE_Escher_EDL933: putative transposase; YPK_2896; phage(gi15803522) | 4e-13 | Click |
| 10 | complement(3190720..3190980) | PROPHAGE_Escher_CFT073: putative transposase; YPK_2897; phage(gi26246170) | 1e-09 | Click |
| 11 | complement(3191110..3192465) | PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; YPK_2898; phage(gi310831360) | 1e-47 | Click |
Region 8, total : 44 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3385457..3385470 | attL CCCCTACAGGATTC | N/A | Click |
| 2 | 3394370..3394382 | attL GTGAATGCAGAAG | N/A | Click |
| 3 | complement(3394937..3395353) | PHAGE_Entero_HK630: tail fiber assembly protein; YPK_3091; phage(gi428782810) | 4e-10 | Click |
| 4 | complement(3395350..3396768) | PHAGE_Yersin_phi80_18: tail fiber protein 2; YPK_3092; phage(gi431809455) | 3e-48 | Click |
| 5 | complement(3396785..3397783) | PHAGE_Yersin_PY54: hypothetical protein PY54p23; YPK_3093; phage(gi33770532) | 2e-45 | Click |
| 6 | complement(3397783..3398829) | PHAGE_Cronob_ENT39118: phage tail protein; YPK_3094; phage(gi431811044) | 2e-76 | Click |
| 7 | 3399237..3399416 | hypothetical protein; YPK_3095 | N/A | Click |
| 8 | complement(3399445..3399678) | PHAGE_Cronob_phiES15: hypothetical protein; YPK_3096; phage(gi401817606) | 2e-07 | Click |
| 9 | complement(3399758..3400390) | hypothetical protein; YPK_3097 | N/A | Click |
| 10 | complement(3400651..3401361) | PHAGE_Entero_HK140: minor tail protein K; YPK_3098; phage(gi428781957) | 1e-109 | Click |
| 11 | complement(3401364..3402116) | PHAGE_Entero_HK225: minor tail protein; YPK_3099; phage(gi428782393) | 3e-102 | Click |
| 12 | complement(3402133..3402474) | PHAGE_Cronob_phiES15: putative minor tail protein; YPK_3100; phage(gi401817607) | 2e-29 | Click |
| 13 | complement(3402477..3402683) | PHAGE_Entero_mEpX2: Cro protein; YPK_3101; phage(gi428765657) | 1e-11 | Click |
| 14 | 3402788..3403510 | PHAGE_Escher_TL_2011c: repressor protein CI; YPK_3102; phage(gi418487062) | 3e-67 | Click |
| 15 | 3403647..3404069 | hypothetical protein; YPK_3103 | N/A | Click |
| 16 | 3404134..3404880 | hypothetical protein; YPK_3104 | N/A | Click |
| 17 | 3404877..3405458 | hypothetical protein; YPK_3105 | N/A | Click |
| 18 | complement(3405527..3405763) | hypothetical protein; YPK_3106 | N/A | Click |
| 19 | 3406321..3406776 | PHAGE_Salmon_vB_SosS_Oslo: integrase; YPK_3107; phage(gi399528791) | 1e-08 | Click |
| 20 | 3406850..3407092 | PHAGE_Entero_mEp237: virulence protein MsgA; YPK_3108; phage(gi435439290) | 3e-26 | Click |
| 21 | 3407106..3407351 | PHAGE_Entero_mEp237: hypothetical protein; YPK_3109; phage(gi435439313) | 5e-16 | Click |
| 22 | complement(3407738..3408175) | PHAGE_Bacter_2: tail fiber; YPK_3110; phage(gi212499733) | 4e-14 | Click |
| 23 | complement(3408185..3409276) | PHAGE_Escher_D108: tail fiber protein; YPK_3111; phage(gi281199694) | 6e-12 | Click |
| 24 | complement(3409327..3409923) | PHAGE_Entero_SfV: tail protein; YPK_3112; phage(gi19548988) | 8e-21 | Click |
| 25 | complement(3409920..3411056) | PHAGE_Entero_SfV: tail protein; YPK_3113; phage(gi19549009) | 2e-36 | Click |
| 26 | complement(3411060..3411497) | PHAGE_Entero_SfV: tail protein; YPK_3114; phage(gi19549008) | 3e-12 | Click |
| 27 | complement(3411494..3412087) | PHAGE_Entero_SfV: tail protein; YPK_3115; phage(gi19549007) | 4e-18 | Click |
| 28 | complement(3412087..3413157) | PHAGE_Entero_SfV: tail protein; YPK_3116; phage(gi19549006) | 1e-40 | Click |
| 29 | complement(3413154..3414560) | PHAGE_Entero_SfV: tail/DNA circulation protein; YPK_3117; phage(gi19549005) | 1e-21 | Click |
| 30 | complement(3414637..3415167) | PHAGE_Cronob_phiES15: hypothetical protein; YPK_3118; phage(gi401817606) | 4e-06 | Click |
| 31 | complement(3415271..3417217) | PHAGE_Entero_K1F: internal virion protein; YPK_3119; phage(gi77118204) | 6e-19 | Click |
| 32 | complement(3417340..3417639) | putative bacteriophage protein; YPK_3120 | N/A | Click |
| 33 | complement(3417641..3418015) | PHAGE_Entero_SfV: hypothetical protein SfVp12; YPK_3121; phage(gi19549002) | 4e-10 | Click |
| 34 | complement(3418028..3419461) | PHAGE_Entero_SfV: tail sheath protein; YPK_3122; phage(gi19549001) | 3e-69 | Click |
| 35 | complement(3419458..3419802) | hypothetical protein; YPK_3123 | N/A | Click |
| 36 | complement(3419802..3420194) | hypothetical protein; YPK_3124 | N/A | Click |
| 37 | complement(3420196..3421242) | PHAGE_Burkho_BcepNazgul: capsid protein E; YPK_3125; phage(gi34610166) | 1e-41 | Click |
| 38 | complement(3421352..3421807) | PHAGE_Cronob_ENT39118: antitermination protein; YPK_3126; phage(gi431811056) | 6e-20 | Click |
| 39 | 3422017..3422262 | PHAGE_Salmon_1: hypothetical protein STM0898.1n.Fels1; YPK_3127; phage(gi169257164) | 5e-12 | Click |
| 40 | 3422395..3422407 | attR GTGAATGCAGAAG | N/A | Click |
| 41 | 3422433..3423587 | PHAGE_Entero_SfV: integrase; YPK_3128; phage(gi19549014) | 1e-134 | Click |
| 42 | 3423625..3423638 | attR CCCCTACAGGATTC | N/A | Click |
| 43 | complement(3423793..3424641) | PHAGE_Marino_P12026: putative DNA modification methylase; YPK_3129; phage(gi399528347) | 6e-11 | Click |
| 44 | complement(3425213..3425311) | hypothetical protein; YPK_3130 | N/A | Click |
| 45 | complement(3425308..3425691) | hypothetical protein; YPK_3131 | N/A | Click |
| 46 | complement(3425755..3426084) | hypothetical protein; YPK_3132 | N/A | Click |
| 47 | complement(3426097..3426567) | DNA repair protein RadC; YPK_3133 | N/A | Click |
| 48 | complement(3426638..3427459) | PHAGE_Cronob_vB_CsaM_GAP32: hypothetical protein; YPK_3134; phage(gi414086954) | 3e-44 | Click |