Definition Caulobacter sp. K31 chromosome, complete genome.
Accession NC_010338
Length 5,477,872
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1156484..1156496  attL    GCGACGGGGCCGG  N/A  Click
2 complement(1163280..1163825)  PHAGE_Synech_S_CRM01: phage tail collar domain-containing protein; Caul_1097; phage(gi333798177)  1e-08  Click
3 complement(1163858..1164409)  PHAGE_Brucel_Pr: putative tail collar protein; Caul_1098; phage(gi418487862)  4e-08  Click
4 complement(1164447..1164986)  PHAGE_Brucel_Pr: putative tail collar protein; Caul_1099; phage(gi418487862)  1e-10  Click
5 1165427..1172464  PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Caul_1100; phage(gi414087138)  6e-24  Click
6 complement(1172520..1172681)  putative transposase; Caul_1101  N/A  Click
7 1172915..1173301  PROPHAGE_Shewan_MR-1: ISSod6, transposase; Caul_1102; phage(gi24374783)  2e-18  Click
8 1173343..1173597  PROPHAGE_Shewan_MR-1: ISSod6, transposase; Caul_1103; phage(gi24374783)  8e-06  Click
9 1173625..1173939  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; Caul_1104; phage(gi24373865)  3e-07  Click
10 1173778..1173790  attR    GCGACGGGGCCGG  N/A  Click
11 1173936..1174796  PROPHAGE_Escher_CFT073: transposase insF; Caul_1105; phage(gi26249410)  2e-59  Click
12 1175065..1175445  putative transposase of insertion sequence ISRm2011-2, orfA protein; Caul_1106  N/A  Click
13 1175507..1176010  transposase and inactivated derivatives-like protein; Caul_1107  N/A  Click
14 complement(1176040..1176426)  PROPHAGE_Brucel_1330: IS711, transposase orfB; Caul_1108; phage(gi23501420)  6e-15  Click
15 complement(1176423..1176791)  PROPHAGE_Shewan_MR-1: ISSod6, transposase; Caul_1109; phage(gi24374783)  2e-18  Click
16 complement(1176846..1177757)  PHAGE_Prochl_P_SSM7: PRGA-formyltransferase; Caul_1110; phage(gi326784531)  1e-14  Click
Region 2, total : 18 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3760585..3761946  PHAGE_Strept_6: terminase large subunit; Caul_3483; phage(gi93007440)  2e-16  Click
2 3761999..3763381  PHAGE_Staphy_phi7401PVL: portal protein; Caul_3484; phage(gi448244665)  9e-05  Click
3 3763420..3764154  PHAGE_Marino_P12026: phage prohead protease; Caul_3485; phage(gi399528321)  2e-21  Click
4 3764291..3765475  PHAGE_Lactob_c5: putative major head protein; Caul_3486; phage(gi418488201)  1e-14  Click
5 3765621..3766247  PHAGE_Escher_PhaxI: hypothetical protein; Caul_3487; phage(gi418488775)  4e-07  Click
6 3766307..3766936  hypothetical protein; Caul_3488  N/A  Click
7 3766929..3767243  hypothetical protein; Caul_3489  N/A  Click
8 3767240..3767587  PHAGE_Marino_P12026: hypothetical protein; Caul_3490; phage(gi399528326)  9e-06  Click
9 3767584..3767946  hypothetical protein; Caul_3491  N/A  Click
10 3768008..3768463  hypothetical protein; Caul_3492  N/A  Click
11 3768465..3768842  hypothetical protein; Caul_3493  N/A  Click
12 3769126..3771684  PHAGE_Rhodob_RcapNL: phage tail-related protein; Caul_3494; phage(gi461474975)  6e-14  Click
13 3771689..3772021  hypothetical protein; Caul_3495  N/A  Click
14 3772021..3772548  PHAGE_Entero_4795: putative tail fiber component; Caul_3496; phage(gi157166054)  3e-07  Click
15 3772545..3773336  PHAGE_Burkho_KS9: tail component protein gp17; Caul_3497; phage(gi255033748)  3e-13  Click
16 3773302..3776184  PHAGE_Burkho_phiE125: putative tail tip fiber protein; Caul_3498; phage(gi17975182)  9e-53  Click
17 3776192..3778693  PHAGE_Equid__9: envelope glycoprotein J; Caul_3499; phage(gi216905924)  4e-17  Click
18 3779149..3781848  PHAGE_Celeri_P12053L: putative phage tail fiber protein; Caul_3500; phage(gi399528893)  5e-21  Click
Region 3, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4042471..4042482  attL    ACGGCCCTTTCT  N/A  Click
2 complement(4042695..4043555)  PROPHAGE_Escher_CFT073: transposase insF; Caul_3730; phage(gi26249410)  2e-59  Click
3 complement(4043552..4043866)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; Caul_3731; phage(gi24373865)  3e-07  Click
4 4044568..4044978  CopY family transcriptional regulator; Caul_3732  N/A  Click
5 4044975..4046765  PHAGE_Emilia_86: hypothetical protein EhV204; Caul_3733; phage(gi73852674)  5e-24  Click
6 4046903..4049827  PHAGE_Acanth_mimivirus: putative zinc protease; Caul_3734; phage(gi311977609)  6e-12  Click
7 4050195..4051130  PHAGE_Burkho_phi1026b: gp58; Caul_3735; phage(gi38707948)  7e-19  Click
8 4051217..4051426  hypothetical protein; Caul_3736  N/A  Click
9 4051692..4052378  GCN5-like N-acetyltransferase; Caul_3737  N/A  Click
10 complement(4052590..4054578)  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; Caul_3738; phage(gi163932195)  5e-05  Click
11 complement(4054723..4055031)  hypothetical protein; Caul_3739  N/A  Click
12 complement(4055130..4055435)  hypothetical protein; Caul_3740  N/A  Click
13 complement(4055587..4056360)  PHAGE_Bathyc_BpV1: hypothetical protein; Caul_3741; phage(gi313768022)  1e-40  Click
14 4056705..4057235  PHAGE_Bathyc_BpV1: hypothetical protein; Caul_3742; phage(gi313768028)  1e-05  Click
15 4057280..4059454  PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; Caul_3743; phage(gi197322490)  2e-26  Click
16 4064327..4064338  attR    ACGGCCCTTTCT  N/A  Click
Region 4, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(4217743..4218423)  PHAGE_Feldma_virus: putative sensor histidine kinase; Caul_3896; phage(gi197322366)  6e-05  Click
2 complement(4218443..4218760)  peptidase; Caul_3897  N/A  Click
3 complement(4218944..4219276)  PHAGE_Strept_1: transcriptional regulator; Caul_3898; phage(gi39653708)  2e-07  Click
4 complement(4219276..4219539)  transcriptional regulator/antitoxin, MazE; Caul_3899  N/A  Click
5 complement(4219589..4220530)  PHAGE_Cafete_BV_PW1: putative DnaJ/Hsp40; Caul_3900; phage(gi310831116)  5e-17  Click
6 complement(4220611..4224450)  PHAGE_Tetras_SI1: hypothetical protein; Caul_3901; phage(gi472342233)  2e-28  Click
7 complement(4224462..4225040)  PHAGE_Roseob_1: phage cell wall peptidase; Caul_3902; phage(gi331028137)  1e-32  Click
8 complement(4225037..4225687)  PHAGE_Tetras_SI1: hypothetical protein; Caul_3903; phage(gi472342235)  3e-12  Click
9 complement(4225687..4226319)  PHAGE_phiJL001: gp83; Caul_3904; phage(gi62327177)  5e-34  Click
10 4226608..4227066  hypothetical protein; Caul_3905  N/A  Click
11 4227133..4227558  excinuclease ABC subunit C; Caul_3906  N/A  Click
12 complement(4227575..4228105)  PHAGE_Tetras_SI1: hypothetical protein; Caul_3907; phage(gi472342238)  9e-07  Click
13 complement(4228105..4228314)  hypothetical protein; Caul_3908  N/A  Click
14 complement(4228301..4228609)  hypothetical protein; Caul_3909  N/A  Click
15 complement(4228658..4229074)  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Caul_3910; phage(gi461474972)  7e-22  Click
16 complement(4229237..4229641)  PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; Caul_3911; phage(gi461474971)  4e-06  Click
17 complement(4229638..4229907)  hypothetical protein; Caul_3912  N/A  Click
18 complement(4230066..4231292)  PHAGE_Salmon_ST64B: Major capsid protein precursor; Caul_3913; phage(gi23505451)  5e-79  Click
19 complement(4231459..4231878)  PHAGE_Tetras_SI1: phage prohead protease; Caul_3914; phage(gi472342256)  1e-18  Click
20 complement(4232021..4232263)  hypothetical protein; Caul_3915  N/A  Click
21 complement(4232397..4233551)  PHAGE_Strept_6: portal protein; Caul_3916; phage(gi93007441)  4e-26  Click
22 4233672..4234136  hypothetical protein; Caul_3917  N/A  Click
23 complement(4234138..4235457)  PHAGE_Strept_6: terminase large subunit; Caul_3918; phage(gi93007440)  2e-54  Click