Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 42 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1573045..1573056  attL    AACAGAGATAAA  N/A  Click
2 complement(1580874..1581065)  PROPHAGE_Escher_CFT073: putative prophage integrase; Shal_1297; phage(gi26250313)  1e-05  Click
3 complement(1581167..1582357)  PHAGE_Vibrio_kappa: putative NAD-dependent DNA ligase; Shal_1298; phage(gi165970237)  4e-59  Click
4 1583457..1583474  attL    CGCCACTTTGCCGCCATT  N/A  Click
5 1583537..1583551  attL    AAGGTAGACTACCTT  N/A  Click
6 complement(1583979..1584164)  PHAGE_Aeromo_phiO18P: putative integrase; Shal_1299; phage(gi148727179)  1e-12  Click
7 1584418..1584432  attR    AAGGTAGACTACCTT  N/A  Click
8 1584532..1585779  PHAGE_Burkho_KS9: hypothetical protein gp32; Shal_1300; phage(gi255033715)  4e-10  Click
9 1585772..1586353  PHAGE_Burkho_KS9: hypothetical protein gp33; Shal_1301; phage(gi255033716)  7e-11  Click
10 complement(1586452..1586625)  PHAGE_Aeromo_phiO18P: putative integrase; Shal_1302; phage(gi148727179)  1e-12  Click
11 complement(1587216..1587716)  hypothetical protein; Shal_1303  N/A  Click
12 complement(1587770..1588795)  PHAGE_Aeromo_phiO18P: putative integrase; Shal_1304; phage(gi148727179)  5e-90  Click
13 complement(1588796..1589986)  PHAGE_Vibrio_kappa: putative NAD-dependent DNA ligase; Shal_1305; phage(gi165970237)  7e-57  Click
14 complement(1590006..1590695)  PHAGE_Vibrio_kappa: putative repressor; Shal_1306; phage(gi165970238)  2e-14  Click
15 1590780..1590986  PHAGE_Aeromo_phiO18P: putative cox protein; Shal_1307; phage(gi148727134)  6e-07  Click
16 1591055..1591597  PHAGE_Aeromo_phiO18P: putative cII protein; Shal_1308; phage(gi148727135)  8e-24  Click
17 1591610..1592056  hypothetical protein; Shal_1309  N/A  Click
18 1592136..1592375  hypothetical protein; Shal_1310  N/A  Click
19 1592377..1592682  hypothetical protein; Shal_1311  N/A  Click
20 1592876..1593112  PHAGE_Vibrio_VHML: ORF53; Shal_1312; phage(gi27311221)  1e-05  Click
21 1593109..1593363  hypothetical protein; Shal_1313  N/A  Click
22 1593363..1595663  PHAGE_Pseudo_PM2: putative replication initiation protein P12; Shal_1314; phage(gi9632863)  1e-79  Click
23 1595898..1596284  hypothetical protein; Shal_1315  N/A  Click
24 complement(1596548..1596799)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; Shal_1316; phage(gi148727148)  2e-17  Click
25 1596994..1597353  SH3 domain-containing protein; Shal_1317  N/A  Click
26 1597498..1598016  hypothetical protein; Shal_1318  N/A  Click
27 complement(1598152..1599168)  PHAGE_Aeromo_phiO18P: putative portal protein; Shal_1319; phage(gi148727149)  2e-93  Click
28 complement(1599150..1601003)  PHAGE_Aeromo_phiO18P: putative terminase large subunit; Shal_1320; phage(gi148727151)  0.0  Click
29 1601163..1602059  PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; Shal_1321; phage(gi148727152)  1e-49  Click
30 1602109..1603149  PHAGE_Aeromo_phiO18P: putative major capsid protein; Shal_1322; phage(gi148727153)  9e-105  Click
31 1603230..1603790  PHAGE_Singap_iridovirus: hypothetical protein ORF141R; Shal_1323; phage(gi56692778)  9e-05  Click
32 1603829..1604503  PHAGE_Aeromo_phiO18P: putative terminase small subunit; Shal_1324; phage(gi148727154)  6e-42  Click
33 1604625..1605074  PHAGE_Aeromo_phiO18P: putative head completion protein; Shal_1325; phage(gi148727155)  4e-12  Click
34 1605071..1605571  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; Shal_1326; phage(gi148727156)  3e-15  Click
35 1605568..1606221  PHAGE_Aeromo_phiO18P: putative tail completion protein; Shal_1327; phage(gi148727157)  2e-18  Click
36 1606235..1607353  PHAGE_Aeromo_phiO18P: putative tail sheath protein; Shal_1328; phage(gi148727158)  2e-83  Click
37 1607378..1607827  PHAGE_Aeromo_phiO18P: putative tail tube protein; Shal_1329; phage(gi148727159)  8e-41  Click
38 1607841..1608047  PHAGE_Aeromo_phiO18P: putative zinc finger protein; Shal_1330; phage(gi148727160)  1e-08  Click
39 1608044..1608592  PHAGE_Vibrio_VP882: conserved putative phage-related protein; Shal_1331; phage(gi126010911)  3e-49  Click
40 1608602..1608991  hypothetical protein; Shal_1332  N/A  Click
41 1608988..1609254  hypothetical protein; Shal_1333  N/A  Click
42 1609251..1609514  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; Shal_1334; phage(gi148727164)  1e-17  Click
43 1609747..1611501  PHAGE_Aeromo_phiO18P: putative tail tape measure protein; Shal_1335; phage(gi148727166)  2e-142  Click
44 1611498..1611851  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; Shal_1336; phage(gi148727167)  5e-14  Click
45 1611844..1613040  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; Shal_1337; phage(gi148727168)  7e-93  Click
46 1613041..1613703  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; Shal_1338; phage(gi148727169)  5e-27  Click
47 1619698..1619715  attR    CGCCACTTTGCCGCCATT  N/A  Click
48 1623690..1623701  attR    AACAGAGATAAA  N/A  Click