| Definition | Methylobacterium extorquens PA1 chromosome, complete genome. |
|---|---|
| Accession | NC_010172 |
| Length | 5,471,154 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 8 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 88429..88444 | attL GCGGTGATCCCGTTCC | N/A | Click |
| 2 | 88725..89294 | PHAGE_Caulob_CcrSwift: putative tyrosine recombinase; Mext_0081; phage(gi414089726) | 2e-23 | Click |
| 3 | 89423..90529 | PHAGE_Macaci_1: large tegument protein; Mext_0082; phage(gi30984464) | 2e-08 | Click |
| 4 | complement(90667..91758) | PHAGE_Cronob_vB_CskP_GAP227: lytic glycosylase; Mext_0083; phage(gi448260264) | 7e-15 | Click |
| 5 | complement(92148..92423) | PHAGE_Sinorh_PBC5: hypothetical protein PBC5p55; Mext_0084; phage(gi18071259) | 5e-17 | Click |
| 6 | complement(92517..93680) | PHAGE_Ectoca_1: EsV-1-12; Mext_0085; phage(gi13242484) | 1e-04 | Click |
| 7 | 93748..93933 | hypothetical protein; Mext_0086 | N/A | Click |
| 8 | 94010..94405 | PHAGE_Caulob_CcrRogue: hypothetical protein; Mext_0087; phage(gi414089077) | 1e-08 | Click |
| 9 | 94529..95107 | PHAGE_Saimir_1: large tegument protein; Mext_0088; phage(gi312162818) | 2e-05 | Click |
| 10 | 106152..106167 | attR GCGGTGATCCCGTTCC | N/A | Click |
Region 2, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 146316..146327 | attL CCGTAGCGCGCG | N/A | Click |
| 2 | complement(157274..157609) | integrase, catalytic region; Mext_0142 | N/A | Click |
| 3 | complement(157640..157768) | hypothetical protein; Mext_0143 | N/A | Click |
| 4 | 158502..158513 | attL CCCTCAGGCAGC | N/A | Click |
| 5 | 159244..159600 | hypothetical protein; Mext_0144 | N/A | Click |
| 6 | 159907..160248 | hypothetical protein; Mext_0145 | N/A | Click |
| 7 | complement(160542..160949) | hypothetical protein; Mext_0146 | N/A | Click |
| 8 | complement(160982..161443) | hypothetical protein; Mext_0147 | N/A | Click |
| 9 | 162144..162698 | hypothetical protein; Mext_0148 | N/A | Click |
| 10 | complement(163251..166871) | PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Mext_0150; phage(gi414087138) | 3e-20 | Click |
| 11 | 167643..167858 | PROPHAGE_Xantho_33913: IS1477 transposase; Mext_0151; phage(gi77747809) | 1e-05 | Click |
| 12 | 167931..168068 | hypothetical protein; Mext_0152 | N/A | Click |
| 13 | 168080..168298 | hypothetical protein; Mext_0153 | N/A | Click |
| 14 | 168920..169324 | PHAGE_Sinorh_PBC5: hypothetical protein PBC5p65; Mext_0154; phage(gi18071257) | 3e-21 | Click |
| 15 | 169575..169982 | PHAGE_Sinorh_PBC5: hypothetical protein PBC5p65; Mext_0155; phage(gi18071257) | 1e-16 | Click |
| 16 | complement(170460..170945) | PHAGE_Cellul_phiST: 6-pyruvoyl tetrahydrobiopterin synthase; Mext_0156; phage(gi472339923) | 1e-23 | Click |
| 17 | complement(171034..172107) | hypothetical protein; Mext_0157 | N/A | Click |
| 18 | complement(172104..172496) | PHAGE_Cellul_phiST: hypothetical protein; Mext_0158; phage(gi472339919) | 7e-08 | Click |
| 19 | complement(172493..173047) | hypothetical protein; Mext_0159 | N/A | Click |
| 20 | complement(173056..174585) | hypothetical protein; Mext_0160 | N/A | Click |
| 21 | 174686..176377 | hypothetical protein; Mext_0161 | N/A | Click |
| 22 | complement(176402..176767) | hypothetical protein; Mext_0162 | N/A | Click |
| 23 | 176990..177559 | PHAGE_Caulob_CcrSwift: putative tyrosine recombinase; Mext_0163; phage(gi414089726) | 8e-23 | Click |
| 24 | 180410..180421 | attR CCCTCAGGCAGC | N/A | Click |
| 25 | 182802..182813 | attR CCGTAGCGCGCG | N/A | Click |
Region 3, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1589390..1589953) | PHAGE_Pseudo_PA11: hypothetical protein ORF033; Mext_1416; phage(gi149408192) | 2e-21 | Click |
| 2 | complement(1590074..1591156) | PHAGE_Tetras_SI1: hypothetical protein; Mext_1417; phage(gi472342232) | 6e-11 | Click |
| 3 | complement(1591181..1595089) | PHAGE_Tetras_SI1: hypothetical protein; Mext_1418; phage(gi472342233) | 9e-30 | Click |
| 4 | complement(1595129..1595593) | PHAGE_Roseob_1: phage cell wall peptidase; Mext_1419; phage(gi331028137) | 1e-28 | Click |
| 5 | complement(1595601..1596494) | PHAGE_Tetras_SI1: hypothetical protein; Mext_1420; phage(gi472342235) | 5e-32 | Click |
| 6 | complement(1596505..1597146) | PHAGE_Roseob_1: putative glycoside hydrolase; Mext_1421; phage(gi331028135) | 2e-37 | Click |
| 7 | complement(1597158..1597784) | PHAGE_Shigel_EP23: phage tail length tape-measure protein 1; Mext_1422; phage(gi371496286) | 6e-14 | Click |
| 8 | complement(1597784..1598014) | hypothetical protein; Mext_1423 | N/A | Click |
| 9 | complement(1598011..1598337) | gene transfer agent (GTA) orfg10; Mext_1424 | N/A | Click |
| 10 | complement(1598340..1598750) | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Mext_1425; phage(gi461474972) | 7e-22 | Click |
| 11 | complement(1598780..1599199) | PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; Mext_1426; phage(gi461474971) | 3e-13 | Click |
| 12 | complement(1599196..1599537) | phage head-tail adaptor; Mext_1427 | N/A | Click |
| 13 | complement(1599559..1600134) | phiE125 gp8 family protein; Mext_1428 | N/A | Click |
| 14 | 1600168..1600923 | peptidase S1 and S6 chymotrypsin/Hap; Mext_1429 | N/A | Click |
| 15 | 1601026..1601919 | PHAGE_Neodip_NPV: hypothetical protein; Mext_1430; phage(gi48843635) | 3e-09 | Click |
| 16 | complement(1601926..1603191) | PHAGE_Salmon_ST64B: Major capsid protein precursor; Mext_1431; phage(gi23505451) | 2e-84 | Click |
| 17 | complement(1603225..1603695) | PHAGE_Tetras_SI1: phage prohead protease; Mext_1432; phage(gi472342256) | 2e-23 | Click |
| 18 | complement(1603754..1604926) | PHAGE_Strept_6: portal protein; Mext_1433; phage(gi93007441) | 2e-22 | Click |
| 19 | complement(1604973..1606349) | PHAGE_Strept_6: terminase large subunit; Mext_1434; phage(gi93007440) | 3e-67 | Click |