| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 13 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1262062..1262724) | PHAGE_Strept_phiC31: gp26; YpAngola_A1214; phage(gi40807292) | 3e-05 | Click |
| 2 | complement(1262814..1264178) | PHAGE_Burkho_phi1026b: gp59; YpAngola_A1215; phage(gi38707949) | 1e-21 | Click |
| 3 | complement(1264332..1264730) | carboxymuconolactone decarboxylase family protein; YpAngola_A1216 | N/A | Click |
| 4 | complement(1264894..1265784) | PHAGE_Synech_S_SM1: 6-phosphogluconate dehydrogenase; YpAngola_A1217; phage(gi326782617) | 5e-11 | Click |
| 5 | complement(1265849..1266676) | hypothetical protein; YpAngola_A1218 | N/A | Click |
| 6 | 1267136..1267603 | PHAGE_Escher_TL_2011b: putative outer membrane lipoprotein; YpAngola_A1219; phage(gi418487638) | 2e-08 | Click |
| 7 | 1268136..1268348 | PHAGE_Lactoc_bIL312: Csp; YpAngola_A1220; phage(gi13095918) | 3e-17 | Click |
| 8 | 1268608..1268820 | PHAGE_Lactoc_bIL312: Csp; YpAngola_A1221; phage(gi13095918) | 4e-17 | Click |
| 9 | complement(1269003..1269512) | PHAGE_Hypert_2: IS element Dka2 orfA; YpAngola_A1222; phage(gi300116744) | 5e-15 | Click |
| 10 | 1269866..1271041 | PHAGE_Clostr_phiCD38_2: tail tape measure; YpAngola_A1223; phage(gi333798123) | 7e-05 | Click |
| 11 | complement(1271148..1272494) | hypothetical protein; YpAngola_A1224 | N/A | Click |
| 12 | 1272745..1273599 | putative glutathione S-transferase YghU; YpAngola_A1225 | N/A | Click |
| 13 | complement(1273789..1274394) | PHAGE_Acinet_Ac42: hypothetical protein; YpAngola_A1226; phage(gi311992578) | 1e-18 | Click |
Region 2, total : 8 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2145593..2146552) | PHAGE_Lactob_phiAT3: putative transposase B; YpAngola_A2063; phage(gi48697274) | 6e-15 | Click |
| 2 | complement(2146624..2147070) | hypothetical protein; YpAngola_A2064 | N/A | Click |
| 3 | complement(2147154..2147294) | PHAGE_Entero_PsP3: gp21; YpAngola_A2065; phage(gi41057373) | 1e-13 | Click |
| 4 | complement(2147697..2147843) | hypothetical protein; YpAngola_A2066 | N/A | Click |
| 5 | complement(2148953..2149252) | PHAGE_Entero_PsP3: gp16; YpAngola_A2068; phage(gi41057368) | 5e-24 | Click |
| 6 | complement(2149249..2149503) | PHAGE_Entero_PsP3: gp15; YpAngola_A2069; phage(gi41057367) | 9e-19 | Click |
| 7 | 2149639..2149911 | PHAGE_Burkho_phiE202: gp6, pANL56; YpAngola_A2070; phage(gi134288760) | 2e-12 | Click |
| 8 | 2149892..2150182 | PHAGE_Burkho_phiE202: gp7, pANL12; YpAngola_A2071; phage(gi134288781) | 3e-07 | Click |
Region 3, total : 37 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2268215..2268805) | PHAGE_Shigel_SP18: thymidine kinase; YpAngola_A2166; phage(gi308814460) | 5e-55 | Click |
| 2 | 2269555..2269962 | global DNA-binding transcriptional dual regulator H-NS; YpAngola_A2167 | N/A | Click |
| 3 | 2270119..2270628 | PROPHAGE_Salmon_Ty2: transposase; YpAngola_A2168; phage(gi29143766) | 6e-84 | Click |
| 4 | 2270709..2271917 | PROPHAGE_Escher_CFT073: transposase; YpAngola_A2169; phage(gi26246249) | 0.0 | Click |
| 5 | complement(2272007..2272150) | hypothetical protein; YpAngola_A2170 | N/A | Click |
| 6 | 2272207..2273229 | PROPHAGE_Escher_CFT073: transposase; YpAngola_A2171; phage(gi26248360) | 0.0 | Click |
| 7 | 2273229..2274008 | PROPHAGE_Escher_CFT073: transposase/IS protein; YpAngola_A2172; phage(gi26248359) | 1e-142 | Click |
| 8 | complement(2274736..2275434) | PHAGE_Pseudo_F116: DNA adenine methyltransferase; YpAngola_A2173; phage(gi56692911) | 3e-53 | Click |
| 9 | 2275461..2275907 | PHAGE_Cronob_ENT47670: putative ninB protein; YpAngola_A2174; phage(gi431810524) | 5e-47 | Click |
| 10 | complement(2276353..2276490) | hypothetical protein; YpAngola_A2175 | N/A | Click |
| 11 | 2276755..2276976 | PHAGE_Escher_TL_2011c: putative late gene regulator Q; YpAngola_A2176; phage(gi418487066) | 6e-18 | Click |
| 12 | 2276973..2277098 | hypothetical protein; YpAngola_A2177 | N/A | Click |
| 13 | 2277247..2277810 | PHAGE_Salmon_SPN3UB: hypothetical protein; YpAngola_A2178; phage(gi423262398) | 1e-29 | Click |
| 14 | 2278234..2278443 | hypothetical protein; YpAngola_A2179 | N/A | Click |
| 15 | 2279018..2279530 | PHAGE_Cronob_phiES15: putative endolysin; YpAngola_A2180; phage(gi401817587) | 2e-51 | Click |
| 16 | 2279515..2279973 | PHAGE_Entero_cdtI: lysin; YpAngola_A2181; phage(gi148609441) | 2e-24 | Click |
| 17 | complement(2280070..2280192) | hypothetical protein; YpAngola_A2182 | N/A | Click |
| 18 | 2280435..2281232 | PHAGE_Cronob_ENT47670: phage antirepressor protein; YpAngola_A2183; phage(gi431810509) | 8e-50 | Click |
| 19 | complement(2281305..2281421) | hypothetical protein; YpAngola_A2184 | N/A | Click |
| 20 | 2282185..2282634 | PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; YpAngola_A2186; phage(gi399528759) | 4e-51 | Click |
| 21 | 2282638..2283222 | PHAGE_Cronob_phiES15: terminase large subunit; YpAngola_A2187; phage(gi401817592) | 5e-65 | Click |
| 22 | 2283270..2284478 | PROPHAGE_Escher_CFT073: transposase; YpAngola_A2188; phage(gi26246249) | 0.0 | Click |
| 23 | 2284483..2285457 | PHAGE_Cronob_phiES15: terminase large subunit; YpAngola_A2189; phage(gi401817592) | 5e-144 | Click |
| 24 | 2286846..2287958 | PHAGE_Cronob_phiES15: hypothetical protein; YpAngola_A2192; phage(gi401817594) | 1e-122 | Click |
| 25 | 2288080..2288853 | PHAGE_Xantho_Xp15: putative phage structural protein; YpAngola_A2193; phage(gi66392059) | 1e-19 | Click |
| 26 | 2288867..2289541 | PHAGE_Cronob_phiES15: putative major capsid protein; YpAngola_A2194; phage(gi401817596) | 4e-16 | Click |
| 27 | 2289728..2289982 | PHAGE_Salmon_SSU5: hypothetical protein; YpAngola_A2195; phage(gi410491538) | 8e-20 | Click |
| 28 | 2289984..2290334 | PHAGE_Cronob_phiES15: putative structural protein 2; YpAngola_A2196; phage(gi401817599) | 5e-33 | Click |
| 29 | 2290336..2290920 | PHAGE_Shigel_EP23: putative tail protein; YpAngola_A2197; phage(gi371496282) | 2e-27 | Click |
| 30 | 2291390..2292310 | PHAGE_Cronob_phiES15: putative major tail protein; YpAngola_A2198; phage(gi401817602) | 3e-75 | Click |
| 31 | 2292323..2292634 | PHAGE_Cronob_phiES15: hypothetical protein; YpAngola_A2199; phage(gi401817603) | 9e-32 | Click |
| 32 | 2292943..2296446 | PHAGE_Entero_mEp213: tail length tape measure protein; YpAngola_A2200; phage(gi428782602) | 1e-151 | Click |
| 33 | 2296449..2296790 | PHAGE_Cronob_phiES15: putative minor tail protein; YpAngola_A2201; phage(gi401817607) | 2e-31 | Click |
| 34 | 2297045..2297554 | PROPHAGE_Salmon_Ty2: transposase; YpAngola_A2202; phage(gi29143766) | 6e-84 | Click |
| 35 | 2297644..2297760 | hypothetical protein; YpAngola_A2203 | N/A | Click |
| 36 | complement(2297810..2298649) | MerR family transcriptional regulator; YpAngola_A2204 | N/A | Click |
| 37 | complement(2298961..2299929) | PHAGE_Mycoba_Omega: gp105; YpAngola_A2205; phage(gi29566839) | 9e-16 | Click |
Region 4, total : 22 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2485143..2486342 | PHAGE_Africa_virus: NifS-like protein; YpAngola_A2368; phage(gi9628230) | 4e-08 | Click |
| 2 | 2487602..2487632 | attL GTTATTTAGCCCAACTCGGCTTATTCAATAT | N/A | Click |
| 3 | 2487823..2489031 | PROPHAGE_Escher_CFT073: transposase; YpAngola_A2370; phage(gi26246249) | 0.0 | Click |
| 4 | complement(2489252..2489671) | PHAGE_Bacter_2: tail fiber; YpAngola_A2371; phage(gi212499733) | 2e-10 | Click |
| 5 | complement(2489682..2490599) | PHAGE_Salmon_SSU5: putative phage tail fiber protein; YpAngola_A2372; phage(gi410491431) | 2e-09 | Click |
| 6 | complement(2490616..2491560) | PHAGE_Yersin_PY54: hypothetical protein PY54p23; YpAngola_A2373; phage(gi33770532) | 3e-40 | Click |
| 7 | complement(2491614..2494817) | PHAGE_Cronob_ENT39118: phage tail protein; YpAngola_A2374; phage(gi431811044) | 0.0 | Click |
| 8 | complement(2495183..2495347) | hypothetical protein; YpAngola_A2375 | N/A | Click |
| 9 | complement(2495389..2496009) | PHAGE_Entero_mEpX2: tail assembly protein; YpAngola_A2376; phage(gi428765633) | 9e-66 | Click |
| 10 | complement(2496065..2496280) | putative phage-related lipoprotein; YpAngola_A2377 | N/A | Click |
| 11 | 2496332..2496451 | hypothetical protein; YpAngola_A2379 | N/A | Click |
| 12 | complement(2496423..2496581) | putative phage-related membrane protein; YpAngola_A2378 | N/A | Click |
| 13 | complement(2497073..2498080) | PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; YpAngola_A2380; phage(gi31544021) | 4e-37 | Click |
| 14 | complement(2498154..2498321) | PHAGE_Escher_TL_2011b: hypothetical protein; YpAngola_A2381; phage(gi418487672) | 6e-15 | Click |
| 15 | complement(2499834..2500544) | PHAGE_Entero_HK140: minor tail protein K; YpAngola_A2383; phage(gi428781957) | 8e-109 | Click |
| 16 | complement(2500547..2501299) | PHAGE_Entero_HK225: minor tail protein; YpAngola_A2384; phage(gi428782393) | 3e-101 | Click |
| 17 | complement(2501419..2501928) | PHAGE_Hypert_2: IS element Dka2 orfA; YpAngola_A2385; phage(gi300116744) | 7e-14 | Click |
| 18 | 2502795..2503769 | mandelate racemase/muconate lactonizing family protein; YpAngola_A2387 | N/A | Click |
| 19 | 2504961..2506577 | murein tripeptide ABC transporter periplasmic murein peptide-binding protein; YpAngola_A2389 | N/A | Click |
| 20 | 2506790..2507803 | zinc transporter; YpAngola_A2390 | N/A | Click |
| 21 | complement(2508065..2508844) | PROPHAGE_Escher_CFT073: transposase/IS protein; YpAngola_A2391; phage(gi26248359) | 1e-142 | Click |
| 22 | complement(2508844..2509866) | PROPHAGE_Escher_CFT073: transposase; YpAngola_A2392; phage(gi26248360) | 0.0 | Click |
| 23 | 2509936..2511174 | PHAGE_Salmon_1: putative bacteriophage integrase; YpAngola_A2393; phage(gi169257156) | 1e-125 | Click |
| 24 | 2511200..2511230 | attR GTTATTTAGCCCAACTCGGCTTATTCAATAT | N/A | Click |
Region 5, total : 10 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2732989..2734992) | PHAGE_Campyl_CP21: putative NAD-dependent epimerase/dehydratase; YpAngola_A2610; phage(gi422935198) | 3e-11 | Click |
| 2 | complement(2734989..2735972) | PHAGE_Salmon_ST160: GtrB; YpAngola_A2611; phage(gi318065903) | 3e-40 | Click |
| 3 | complement(2735959..2737113) | PHAGE_Ostreo_1: hypothetical protein H665_p041; YpAngola_A2612; phage(gi260665911) | 1e-19 | Click |
| 4 | 2737591..2738100 | PHAGE_Hypert_2: IS element Dka2 orfA; YpAngola_A2613; phage(gi300116744) | 5e-15 | Click |
| 5 | complement(2738188..2738931) | PHAGE_Plankt_PaV_LD: ABC transporter; YpAngola_A2614; phage(gi371496158) | 1e-07 | Click |
| 6 | complement(2738956..2739510) | PHAGE_Canary_virus: CNPV087 putative glutathione peroxidase; YpAngola_A2615; phage(gi40556025) | 4e-18 | Click |
| 7 | complement(2739580..2740587) | vtamin B12-transporter permease; YpAngola_A2616 | N/A | Click |
| 8 | complement(2740814..2741272) | hypothetical protein; YpAngola_A2617 | N/A | Click |
| 9 | complement(2741672..2742181) | PHAGE_Hypert_2: IS element Dka2 orfA; YpAngola_A2618; phage(gi300116744) | 5e-15 | Click |
| 10 | complement(2742319..2742615) | PHAGE_Bacill_36: DNA-binding HU protein; YpAngola_A2619; phage(gi156564019) | 9e-16 | Click |