Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 10 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(405194..405445) | prevent-host-death protein; GDI_0406 | N/A | Click |
2 | 405783..406679 | PROPHAGE_Escher_CFT073: transposase; GDI_0407; phage(gi26248360) | 1e-11 | Click |
3 | 406386..406397 | attL GCCGTGGACCGG | N/A | Click |
4 | complement(406716..407621) | PHAGE_Entero_4795: putative transposase OrfB protein of IS629; GDI_0408; phage(gi157166067) | 4e-96 | Click |
5 | complement(407621..407947) | PHAGE_Entero_4795: putative transposase OrfA protein of IS629; GDI_0409; phage(gi157166062) | 4e-28 | Click |
6 | 408618..409397 | PROPHAGE_Escher_CFT073: transposase/IS protein; GDI_0411; phage(gi26248359) | 7e-35 | Click |
7 | 409579..410361 | PROPHAGE_Xantho_33913: IS1480 transposase; GDI_0412; phage(gi21231089) | 4e-20 | Click |
8 | 410569..411072 | TetR family transcriptional regulator; GDI_0413 | N/A | Click |
9 | 411297..412337 | peroxidase family protein; GDI_0414 | N/A | Click |
10 | 412339..413163 | bacteriocin protein; GDI_0415 | N/A | Click |
11 | complement(413206..414132) | PHAGE_Acanth_1: hypothetical protein ATCV1_Z295L; GDI_0416; phage(gi155371242) | 2e-05 | Click |
12 | 419696..419707 | attR GCCGTGGACCGG | N/A | Click |
Region 2, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 988779..988790 | attL TCGCATGACATA | N/A | Click |
2 | 992342..993574 | PROPHAGE_Escher_CFT073: transposase; GDI_0975; phage(gi26248360) | 2e-31 | Click |
3 | 993571..994374 | PROPHAGE_Escher_CFT073: transposase/IS protein; GDI_0976; phage(gi26248359) | 8e-50 | Click |
4 | 994371..995447 | hypothetical protein; GDI_0977 | N/A | Click |
5 | 995491..995781 | hypothetical protein; GDI_0978 | N/A | Click |
6 | complement(995922..996980) | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; GDI_0979; phage(gi160688404) | 2e-10 | Click |
7 | complement(997143..998021) | PHAGE_Entero_Sf6: putative transposase OrfB; GDI_0980; phage(gi41057343) | 3e-29 | Click |
8 | complement(998018..998329) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; GDI_0981; phage(gi17546153) | 2e-05 | Click |
9 | complement(998399..999172) | hypothetical protein; GDI_0982 | N/A | Click |
10 | 999258..999728 | PROPHAGE_Brucel_1330: ISBm1, transposase orfA; GDI_0983; phage(gi23501424) | 2e-10 | Click |
11 | 999725..1000087 | PROPHAGE_Xantho_33913: IS1480 transposase; GDI_0984; phage(gi21231089) | 5e-14 | Click |
12 | 1000289..1001542 | hypothetical protein; GDI_0985 | N/A | Click |
13 | complement(1001646..1002785) | PHAGE_Lactob_KC5a: putative minor tail protein; GDI_0986; phage(gi90592623) | 6e-06 | Click |
14 | complement(1002815..1003804) | PROPHAGE_Mesorh_MAFF303099: transposase; GDI_0987; phage(gi13474791) | 2e-08 | Click |
15 | 1003901..1004224 | ArsR family transcriptional regulator; GDI_0988 | N/A | Click |
16 | 1004278..1005174 | 2-dehydropantoate 2-reductase; GDI_0989 | N/A | Click |
17 | 1005431..1006963 | PROPHAGE_Escher_CFT073: transposase; GDI_0990; phage(gi26248360) | 5e-14 | Click |
18 | 1016949..1016960 | attR TCGCATGACATA | N/A | Click |
Region 3, total : 29 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1058080..1058092 | attL ATGGCTGATGGCG | N/A | Click |
2 | complement(1058482..1059387) | PROPHAGE_Xantho_306: transposase; GDI_1043; phage(gi21243165) | 3e-106 | Click |
3 | complement(1059387..1059701) | PROPHAGE_Escher_Sakai: putative transposase; GDI_1044; phage(gi15832212) | 6e-28 | Click |
4 | 1059743..1059760 | attL GAAACCCGGGACGCTTCA | N/A | Click |
5 | 1059776..1060225 | hypothetical protein; GDI_1045 | N/A | Click |
6 | 1060239..1060811 | hypothetical protein; GDI_1046 | N/A | Click |
7 | complement(1060846..1062321) | allantoin permease; GDI_1047 | N/A | Click |
8 | 1062475..1062762 | PHAGE_Staphy_phiPV83: transposase; GDI_1048; phage(gi9635722) | 2e-08 | Click |
9 | 1063083..1063138 | attL AGCATCCACGCCGGCCACTTCAAGCCGTCCGTCAGATTAAGTGCAAACTTCTACAC | N/A | Click |
10 | complement(1063339..1063650) | transposase; GDI_1051 | N/A | Click |
11 | 1064362..1065072 | PHAGE_Staphy_3: tail length tape measure protein; GDI_1053; phage(gi156604065) | 2e-05 | Click |
12 | complement(1065116..1065265) | hypothetical protein; GDI_1054 | N/A | Click |
13 | 1065277..1065789 | PHAGE_Ralsto_RSM3: hypothetical protein RSM3_gp14; GDI_1055; phage(gi209901327) | 5e-18 | Click |
14 | complement(1065817..1066038) | hypothetical protein; GDI_1056 | N/A | Click |
15 | 1066586..1066852 | PROPHAGE_Xantho_306: ISxac2 transposase; GDI_1057; phage(gi21244663) | 5e-25 | Click |
16 | 1066876..1067598 | PROPHAGE_Xantho_33913: IS1477 transposase; GDI_1058; phage(gi77747809) | 1e-57 | Click |
17 | 1067690..1068151 | transposase; GDI_1059 | N/A | Click |
18 | 1068528..1068583 | attR AGCATCCACGCCGGCCACTTCAAGCCGTCCGTCAGATTAAGTGCAAACTTCTACAC | N/A | Click |
19 | 1069166..1069723 | hypothetical protein; GDI_1062 | N/A | Click |
20 | complement(1069773..1069937) | hypothetical protein; GDI_1063 | N/A | Click |
21 | 1070114..1070428 | PROPHAGE_Escher_Sakai: putative transposase; GDI_1064; phage(gi15832212) | 6e-28 | Click |
22 | 1070425..1070697 | PROPHAGE_Xantho_306: transposase; GDI_1065; phage(gi21243165) | 4e-13 | Click |
23 | 1070697..1071332 | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; GDI_1066; phage(gi17975200) | 3e-76 | Click |
24 | 1071354..1071371 | attR GAAACCCGGGACGCTTCA | N/A | Click |
25 | complement(1071510..1071992) | PHAGE_Prochl_SSM4: heat shock protein; GDI_1067; phage(gi61806343) | 1e-18 | Click |
26 | complement(1072239..1072721) | hypothetical protein; GDI_1068 | N/A | Click |
27 | 1072824..1073144 | hypothetical protein; GDI_1069 | N/A | Click |
28 | 1073179..1073340 | hypothetical protein; GDI_1070 | N/A | Click |
29 | 1073449..1073712 | bifunctional antitoxin/transcriptional repressor RelB; GDI_1071 | N/A | Click |
30 | 1073705..1074049 | relE protein (antitoxin); GDI_1072 | N/A | Click |
31 | 1074848..1074860 | attR ATGGCTGATGGCG | N/A | Click |
32 | 1074879..1074890 | attL ATGTAATACCAA | N/A | Click |
33 | 1074987..1075190 | transposase; GDI_1074 | N/A | Click |
34 | complement(1075686..1076156) | PROPHAGE_Shewan_MR-1: ISSod10, transposase OrfA; GDI_1076; phage(gi24371809) | 1e-05 | Click |
35 | 1076208..1076474 | PROPHAGE_Xantho_306: ISxac2 transposase; GDI_1077; phage(gi21244663) | 1e-24 | Click |
36 | 1076510..1077325 | PROPHAGE_Xantho_33913: IS1477 transposase; GDI_1078; phage(gi77747809) | 8e-63 | Click |
37 | 1080061..1080072 | attR ATGTAATACCAA | N/A | Click |
Region 4, total : 13 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2139155..2140420 | PHAGE_Acanth_mimivirus: putative zinc protease; GDI_2089; phage(gi311977609) | 3e-31 | Click |
2 | 2140417..2141757 | PROPHAGE_Escher_Sakai: protease TldD; GDI_2090; phage(gi15833371) | 8e-16 | Click |
3 | 2141772..2142746 | hypothetical protein; GDI_2091 | N/A | Click |
4 | complement(2143072..2143635) | PROPHAGE_Shewan_MR-1: putative transposase; GDI_2092; phage(gi28275189) | 3e-17 | Click |
5 | complement(2143632..2144141) | PROPHAGE_Shewan_MR-1: ISSod10, transposase OrfA; GDI_2093; phage(gi24371809) | 9e-14 | Click |
6 | 2144325..2144846 | PHAGE_Synech_S_SKS1: sulfotransferase; GDI_2094; phage(gi472341123) | 4e-15 | Click |
7 | complement(2145039..2145695) | PHAGE_Strept_7201: ORF5; GDI_2095; phage(gi9634631) | 3e-07 | Click |
8 | complement(2145685..2147217) | PROPHAGE_Escher_CFT073: transposase; GDI_2096; phage(gi26248360) | 6e-13 | Click |
9 | 2147274..2147528 | hypothetical protein; GDI_2097 | N/A | Click |
10 | 2147601..2148278 | invasion associated locus B (IalB) protein; GDI_2098 | N/A | Click |
11 | complement(2148337..2148474) | hypothetical protein; GDI_2099 | N/A | Click |
12 | complement(2148484..2149431) | protoheme IX farnesyltransferase; GDI_2100 | N/A | Click |
13 | complement(2149428..2150840) | PHAGE_Lactob_KC5a: putative minor tail protein; GDI_2101; phage(gi90592623) | 1e-05 | Click |
Region 5, total : 13 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2691650..2691662 | attL GCGGCGGGGGCGG | N/A | Click |
2 | 2691711..2692769 | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; GDI_2599; phage(gi160688404) | 2e-10 | Click |
3 | 2693440..2693751 | PHAGE_Escher_D108: Ner; GDI_2600; phage(gi281199646) | 7e-05 | Click |
4 | 2693748..2694587 | PHAGE_Rhodob_RcapMu: ParB-like nuclease; GDI_2601; phage(gi356870851) | 1e-17 | Click |
5 | 2694584..2694844 | hypothetical protein; GDI_2602 | N/A | Click |
6 | 2694841..2695308 | hypothetical protein; GDI_2603 | N/A | Click |
7 | 2695365..2695763 | PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; GDI_2604; phage(gi356870852) | 1e-10 | Click |
8 | 2696288..2697808 | PROPHAGE_Escher_CFT073: transposase; GDI_2605; phage(gi26248360) | 3e-12 | Click |
9 | 2697798..2698577 | PROPHAGE_Escher_CFT073: transposase/IS protein; GDI_2606; phage(gi26248359) | 3e-35 | Click |
10 | 2698737..2699435 | PHAGE_Entero_SfV: tail protein; GDI_2607; phage(gi19549009) | 2e-23 | Click |
11 | 2699432..2700121 | PHAGE_Entero_SfV: tail protein; GDI_2608; phage(gi19548988) | 7e-08 | Click |
12 | 2700147..2701139 | PHAGE_Klebsi_JD001: putative tail-fiber protein; GDI_2609; phage(gi448245166) | 1e-44 | Click |
13 | 2701136..2703082 | hypothetical protein; GDI_2610 | N/A | Click |
14 | 2703164..2703427 | PHAGE_Acinet_Bphi_B1251: hypothetical protein; GDI_2611; phage(gi423262015) | 1e-05 | Click |
15 | 2705360..2705372 | attR GCGGCGGGGGCGG | N/A | Click |
Region 6, total : 25 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3649996..3650019 | attL GGAGAATTGGTGGAGGGGGTTTCC | N/A | Click |
2 | complement(3651760..3652326) | PHAGE_Pectob_My1: YadA domain-containing protein; GDI_3555; phage(gi410491156) | 3e-05 | Click |
3 | complement(3652406..3652948) | hypothetical protein; GDI_3556 | N/A | Click |
4 | complement(3653003..3653296) | hypothetical protein; GDI_3557 | N/A | Click |
5 | complement(3653375..3653746) | hypothetical protein; GDI_3558 | N/A | Click |
6 | complement(3653743..3654234) | PHAGE_Burkho_AH2: lysozyme; GDI_3559; phage(gi399529080) | 3e-06 | Click |
7 | complement(3654231..3654512) | hypothetical protein; GDI_3560 | N/A | Click |
8 | complement(3654558..3656489) | PHAGE_Burkho_BcepNY3: tail spike protein; GDI_3561; phage(gi149882951) | 9e-06 | Click |
9 | complement(3656486..3657502) | PHAGE_Klebsi_JD001: putative tail-fiber protein; GDI_3562; phage(gi448245166) | 2e-46 | Click |
10 | complement(3657513..3658160) | PHAGE_Entero_SfV: tail protein; GDI_3563; phage(gi19548988) | 6e-20 | Click |
11 | complement(3658164..3659636) | PHAGE_RD114_retrovirus: gag-pol precursor polyprotein; GDI_3564; phage(gi157939613) | 1e-04 | Click |
12 | complement(3659637..3660365) | PHAGE_Entero_SfV: tail protein; GDI_3565; phage(gi19549009) | 2e-24 | Click |
13 | complement(3660366..3660866) | PHAGE_Entero_SfV: tail protein; GDI_3566; phage(gi19549008) | 6e-09 | Click |
14 | complement(3660878..3661390) | PHAGE_Entero_Mu: putative baseplate assembly protein; GDI_3567; phage(gi9633536) | 5e-12 | Click |
15 | complement(3661387..3662589) | PHAGE_Entero_phiP27: putative tail protein; GDI_3568; phage(gi18249913) | 6e-29 | Click |
16 | complement(3662652..3663959) | PHAGE_Entero_SfV: tail/DNA circulation protein; GDI_3569; phage(gi19549005) | 1e-23 | Click |
17 | 3664121..3664297 | hypothetical protein; GDI_3570 | N/A | Click |
18 | 3664329..3664580 | PHAGE_Burkho_phiE202: gp7, pANL12; GDI_3571; phage(gi134288781) | 4e-07 | Click |
19 | complement(3664600..3665010) | hypothetical protein; GDI_3572 | N/A | Click |
20 | 3666724..3667362 | PROPHAGE_Escher_CFT073: transposase/IS protein; GDI_3574; phage(gi26248359) | 8e-33 | Click |
21 | 3667452..3668516 | PHAGE_Pectob_ZF40: putative methylase; GDI_3575; phage(gi422936661) | 6e-40 | Click |
22 | 3668513..3668989 | hypothetical protein; GDI_3576 | N/A | Click |
23 | 3668980..3669648 | hypothetical protein; GDI_3577 | N/A | Click |
24 | 3669656..3669883 | hypothetical protein; GDI_3578 | N/A | Click |
25 | complement(3671285..3672640) | PROPHAGE_Escher_CFT073: putative prophage integrase; GDI_3580; phage(gi26250313) | 2e-72 | Click |
26 | 3672690..3672713 | attR GGAGAATTGGTGGAGGGGGTTTCC | N/A | Click |
27 | 3672861..3674090 | PROPHAGE_Escher_CFT073: P4 family integrase; GDI_3581; phage(gi26248244) | 1e-79 | Click |
Region 7, total : 13 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3859994..3861301 | PHAGE_Natria_PhiCh1: M.PhiCh1-II; GDI_3776; phage(gi22091184) | 7e-23 | Click |
2 | complement(3861185..3862126) | hypothetical protein; GDI_3777 | N/A | Click |
3 | complement(3862123..3864438) | PHAGE_Ectoca_1: EsV-1-186; GDI_3778; phage(gi13242656) | 1e-05 | Click |
4 | 3864624..3865085 | PHAGE_Burkho_KL3: gp46; GDI_3779; phage(gi327198091) | 2e-32 | Click |
5 | 3865082..3865294 | hypothetical protein; GDI_3780 | N/A | Click |
6 | 3865512..3865910 | PHAGE_Staphy_phiPV83: transposase; GDI_3781; phage(gi9635722) | 3e-12 | Click |
7 | 3866051..3866599 | PHAGE_Staphy_phiPV83: transposase; GDI_3782; phage(gi9635722) | 8e-08 | Click |
8 | 3866969..3867739 | PROPHAGE_Xantho_33913: IS1480 transposase; GDI_3783; phage(gi21231089) | 4e-26 | Click |
9 | complement(3867904..3868332) | hypothetical protein; GDI_3784 | N/A | Click |
10 | complement(3868402..3869304) | PHAGE_Burkho_phi1026b: gp58; GDI_3785; phage(gi38707948) | 7e-07 | Click |
11 | 3869487..3870260 | PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; GDI_3786; phage(gi116326757) | 6e-15 | Click |
12 | 3870328..3871737 | PHAGE_Lactob_KC5a: putative minor tail protein; GDI_3787; phage(gi90592623) | 6e-06 | Click |
13 | complement(3871714..3872544) | PHAGE_Ostreo_2: putative 3-methyl-2-oxobutanoate hydroxymethyltransferase; GDI_3788; phage(gi314055124) | 4e-41 | Click |