| Definition | Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 chromosome, complete genome. |
|---|---|
| Accession | NC_010067 |
| Length | 4,600,800 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 31 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 909570..909581 | attL TTCGTTTTAAAA | N/A | Click |
| 2 | 916353..916376 | attL GTTCGAGTCCAGTCAGAGGAGCCA | N/A | Click |
| 3 | 916502..917023 | PROPHAGE_Escher_EDL933: partial putative integrase; SARI_00905; phage(gi15804869) | 4e-42 | Click |
| 4 | 917068..917343 | PROPHAGE_Shigel_301: putative P4-type integrase; SARI_00906; phage(gi24114228) | 1e-24 | Click |
| 5 | complement(917378..918949) | PHAGE_Stx2_c_1717: transposase; SARI_00907; phage(gi209447153) | 2e-72 | Click |
| 6 | complement(918977..919312) | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf1; SARI_00909; phage(gi26990788) | 3e-12 | Click |
| 7 | complement(919299..919613) | hypothetical protein; SARI_00911 | N/A | Click |
| 8 | 919311..919421 | hypothetical protein; SARI_00908 | N/A | Click |
| 9 | 919506..919805 | hypothetical protein; SARI_00910 | N/A | Click |
| 10 | 919954..920442 | hypothetical protein; SARI_00912 | N/A | Click |
| 11 | 920801..921379 | hypothetical protein; SARI_00913 | N/A | Click |
| 12 | complement(921434..921703) | hypothetical protein; SARI_00915 | N/A | Click |
| 13 | 921570..921740 | hypothetical protein; SARI_00914 | N/A | Click |
| 14 | complement(921893..922237) | hypothetical protein; SARI_00917 | N/A | Click |
| 15 | 921923..922054 | hypothetical protein; SARI_00916 | N/A | Click |
| 16 | complement(922319..922516) | hypothetical protein; SARI_00919 | N/A | Click |
| 17 | 922509..923210 | hypothetical protein; SARI_00918 | N/A | Click |
| 18 | 923312..923779 | hypothetical protein; SARI_00920 | N/A | Click |
| 19 | complement(923836..924072) | hypothetical protein; SARI_00921 | N/A | Click |
| 20 | complement(924213..924509) | hypothetical protein; SARI_00922 | N/A | Click |
| 21 | complement(924639..924929) | hypothetical protein; SARI_00923 | N/A | Click |
| 22 | complement(925002..925238) | hypothetical protein; SARI_00924 | N/A | Click |
| 23 | complement(925304..925630) | hypothetical protein; SARI_00925 | N/A | Click |
| 24 | complement(925651..925869) | PHAGE_Entero_P4: transcriptional regulator; SARI_00926; phage(gi9627517) | 2e-06 | Click |
| 25 | complement(926045..926905) | hypothetical protein; SARI_00927 | N/A | Click |
| 26 | 927184..927207 | attR GTTCGAGTCCAGTCAGAGGAGCCA | N/A | Click |
| 27 | 927308..927562 | PROPHAGE_Escher_CFT073: prophage P4 integrase; SARI_00928; phage(gi26251024) | 7e-11 | Click |
| 28 | complement(927476..927718) | hypothetical protein; SARI_00929 | N/A | Click |
| 29 | 928056..928205 | PROPHAGE_Escher_MG1655: IS3 transposase A; SARI_00930; phage(gi226524700) | 4e-17 | Click |
| 30 | 928352..929218 | PROPHAGE_Escher_MG1655: IS3 transposase B; SARI_00931; phage(gi16128284) | 2e-148 | Click |
| 31 | complement(929499..930503) | PHAGE_Entero_ST104: ORF19; SARI_00932; phage(gi46358666) | 7e-12 | Click |
| 32 | complement(930763..930906) | hypothetical protein; SARI_00933 | N/A | Click |
| 33 | 931137..931349 | PHAGE_Lactoc_bIL312: Csp; SARI_00934; phage(gi13095918) | 4e-16 | Click |
| 34 | 931816..932037 | PROPHAGE_Escher_MG1655: IS150 transposase A; SARI_00935; phage(gi16131428) | 7e-08 | Click |
| 35 | 941593..941604 | attR TTCGTTTTAAAA | N/A | Click |
Region 2, total : 12 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1198025..1198618) | PHAGE_Entero_Sf6: putative transposase OrfB; SARI_01235; phage(gi41057343) | 2e-105 | Click |
| 2 | complement(1198782..1199033) | PHAGE_Entero_Sf6: gene 56 protein; SARI_01236; phage(gi41057344) | 4e-32 | Click |
| 3 | 1199211..1199438 | hypothetical protein; SARI_01237 | N/A | Click |
| 4 | 1199443..1199664 | hypothetical protein; SARI_01238 | N/A | Click |
| 5 | complement(1199633..1199845) | PROPHAGE_Shewan_MR-1: ISSod4, transposase; SARI_01240; phage(gi24373869) | 7e-24 | Click |
| 6 | 1199810..1200106 | hypothetical protein; SARI_01239 | N/A | Click |
| 7 | 1200314..1201189 | 23S rRNA pseudouridylate synthase B; SARI_01241 | N/A | Click |
| 8 | complement(1201284..1201874) | PHAGE_Cyanop_PSS2: BtuR/CobO ATP:corrinoid adenosyltransferase; SARI_01242; phage(gi254729498) | 1e-14 | Click |
| 9 | complement(1201871..1202632) | PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; SARI_01243; phage(gi116326757) | 4e-09 | Click |
| 10 | 1202825..1203916 | PHAGE_Entero_WV8: putative head maturation protease; SARI_01244; phage(gi238801794) | 4e-12 | Click |
| 11 | complement(1204080..1204331) | hypothetical protein; SARI_01245 | N/A | Click |
| 12 | 1204734..1207331 | PHAGE_Cafete_BV_PW1: putative DNA topoisomerase IA; SARI_01246; phage(gi310831073) | 6e-89 | Click |
Region 3, total : 10 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1225757..1226563) | PHAGE_Plankt_PaV_LD: ABC transporter; SARI_01266; phage(gi371496158) | 1e-15 | Click |
| 2 | complement(1226565..1227557) | PHAGE_Plankt_PaV_LD: ABC transporter; SARI_01267; phage(gi371496158) | 4e-08 | Click |
| 3 | complement(1227557..1228447) | hypothetical protein; SARI_01268 | N/A | Click |
| 4 | complement(1228840..1229046) | PHAGE_Entero_Sf6: putative transposase OrfB; SARI_01269; phage(gi41057343) | 2e-34 | Click |
| 5 | complement(1229165..1229890) | PHAGE_Entero_Sf6: putative transposase OrfB; SARI_01270; phage(gi41057343) | 7e-95 | Click |
| 6 | complement(1230036..1230377) | hypothetical protein; SARI_01271 | N/A | Click |
| 7 | complement(1230592..1231014) | PHAGE_Entero_Sf6: gene 56 protein; SARI_01273; phage(gi41057344) | 2e-32 | Click |
| 8 | 1231008..1231145 | PHAGE_Salmon_1: putative bacteriophage tail assembly protein; SARI_01272; phage(gi169257205) | 1e-19 | Click |
| 9 | complement(1231360..1232052) | hypothetical protein; SARI_01274 | N/A | Click |
| 10 | 1232506..1232871 | PHAGE_Entero_P1: Cin; SARI_01275; phage(gi46401653) | 6e-49 | Click |
Region 4, total : 11 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2319228..2319512) | PHAGE_Stx2_c_1717: transposase; SARI_02392; phage(gi209447153) | 1e-15 | Click |
| 2 | complement(2319780..2320859) | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; SARI_02393; phage(gi169257322) | 5e-140 | Click |
| 3 | complement(2321135..2321476) | PHAGE_Salmon_vB_SosS_Oslo: minor tail protein; SARI_02394; phage(gi399528788) | 3e-42 | Click |
| 4 | 2321863..2322444 | PHAGE_Entero_ES18: gp36; SARI_02395; phage(gi62362249) | 3e-43 | Click |
| 5 | 2322818..2323159 | PHAGE_Salmon_1: putative bacteriophage host-specificity protein; Lambda gpJ homolog; SARI_02396; phage(gi169257203) | 4e-45 | Click |
| 6 | complement(2323249..2323740) | PHAGE_Salmon_1: bacteriophage terminase, small subunit; SARI_02397; phage(gi169257184) | 2e-86 | Click |
| 7 | 2324093..2324284 | hypothetical protein; SARI_02398 | N/A | Click |
| 8 | complement(2324339..2324842) | hypothetical protein; SARI_02399 | N/A | Click |
| 9 | complement(2325194..2325439) | hypothetical protein; SARI_02400 | N/A | Click |
| 10 | complement(2325532..2326428) | PHAGE_Gifsy_1: bacteriophage lysis protein; Rz; SARI_02401; phage(gi169257238) | 7e-56 | Click |
| 11 | complement(2326436..2328850) | PHAGE_Parame_NY2A: hypothetical protein NY2A_B034L; SARI_02402; phage(gi157952338) | 6e-10 | Click |
Region 5, total : 51 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2562294..2564444) | PHAGE_Salmon_epsilon34: Tailspike protein; SARI_02638; phage(gi221328636) | 4e-66 | Click |
| 2 | complement(2564616..2566613) | PHAGE_Entero_Sf6: gene 13 protein; SARI_02639; phage(gi41057291) | 0.0 | Click |
| 3 | complement(2566613..2567953) | PHAGE_Salmon_epsilon34: Ejection protein; SARI_02640; phage(gi221328630) | 0.0 | Click |
| 4 | complement(2567996..2568685) | PHAGE_Salmon_epsilon34: Ejection protein; SARI_02641; phage(gi221328629) | 9e-121 | Click |
| 5 | complement(2568688..2569143) | PHAGE_Salmon_epsilon34: Virion assembly protein; SARI_02642; phage(gi221328628) | 1e-87 | Click |
| 6 | complement(2569143..2569844) | PHAGE_Salmon_epsilon34: Tail accessory protein; SARI_02643; phage(gi221328627) | 1e-101 | Click |
| 7 | complement(2569848..2571242) | PHAGE_Salmon_epsilon34: Tail accessory protein; SARI_02644; phage(gi221328626) | 0.0 | Click |
| 8 | complement(2571226..2571726) | PHAGE_Salmon_vB_SemP_Emek: head completion protein; SARI_02645; phage(gi399498798) | 4e-89 | Click |
| 9 | complement(2571710..2571919) | PHAGE_Entero_P22: hypothetical protein P22gp06; SARI_02646; phage(gi9635539) | 2e-35 | Click |
| 10 | complement(2571958..2573253) | PHAGE_Salmon_epsilon34: Coat protein; SARI_02647; phage(gi221328623) | 0.0 | Click |
| 11 | complement(2573253..2574164) | PHAGE_Salmon_epsilon34: Scaffolding protein; SARI_02648; phage(gi221328622) | 6e-166 | Click |
| 12 | complement(2574178..2576355) | PHAGE_Salmon_vB_SemP_Emek: portal protein; SARI_02649; phage(gi399498794) | 0.0 | Click |
| 13 | complement(2576355..2577854) | PHAGE_Salmon_epsilon34: Terminase, large subunit; SARI_02650; phage(gi221328620) | 0.0 | Click |
| 14 | complement(2577832..2578320) | PHAGE_Salmon_epsilon34: Terminase, small subunit; SARI_02651; phage(gi221328619) | 6e-91 | Click |
| 15 | complement(2578344..2578523) | PHAGE_Entero_P22: Orf59c; SARI_02652; phage(gi19343398) | 8e-25 | Click |
| 16 | complement(2578525..2578881) | PHAGE_Salmon_epsilon34: hypothetical protein epsilon34_gp69; SARI_02653; phage(gi221328688) | 5e-38 | Click |
| 17 | complement(2578981..2579466) | PHAGE_Salmon_epsilon34: hypothetical protein epsilon34_gp68; SARI_02654; phage(gi221328687) | 2e-89 | Click |
| 18 | complement(2579674..2580111) | PHAGE_Entero_P22: hypothetical protein P22gp67; SARI_02655; phage(gi12711790) | 2e-75 | Click |
| 19 | complement(2580108..2580548) | PHAGE_Entero_ES18: gp76; SARI_02656; phage(gi62362289) | 8e-76 | Click |
| 20 | complement(2580532..2580855) | PHAGE_Salmon_epsilon34: Holin, possible dual-start motif; SARI_02657; phage(gi221328682) | 6e-50 | Click |
| 21 | complement(2581298..2582062) | PHAGE_Entero_ES18: gp73; SARI_02658; phage(gi62362286) | 5e-142 | Click |
| 22 | complement(2582059..2582241) | PHAGE_Salmon_epsilon34: NinZ; SARI_02659; phage(gi221328679) | 3e-27 | Click |
| 23 | complement(2582229..2582699) | PHAGE_Salmon_epsilon34: possible NinG recombination protein; SARI_02660; phage(gi221328678) | 7e-90 | Click |
| 24 | complement(2583266..2583688) | PHAGE_Entero_HK225: NinB protein; SARI_02661; phage(gi428782436) | 2e-15 | Click |
| 25 | complement(2583691..2583891) | hypothetical protein; SARI_02662 | N/A | Click |
| 26 | complement(2583894..2584157) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SARI_02663; phage(gi399498844) | 6e-28 | Click |
| 27 | complement(2584231..2585667) | PHAGE_Entero_mEpX2: DNA replication protein P; SARI_02664; phage(gi428765661) | 0.0 | Click |
| 28 | complement(2585657..2586556) | PHAGE_Salmon_ST160: Gp18; SARI_02665; phage(gi318065929) | 3e-171 | Click |
| 29 | complement(2586549..2586695) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SARI_02666; phage(gi399498839) | 8e-22 | Click |
| 30 | complement(2586730..2587008) | PHAGE_Entero_mEpX2: CII protein; SARI_02667; phage(gi428765658) | 9e-43 | Click |
| 31 | complement(2587144..2587371) | PHAGE_Stx2_c_I: Cro protein; SARI_02668; phage(gi20065917) | 1e-34 | Click |
| 32 | 2587449..2588159 | PHAGE_Stx2_c_I: CI protein; SARI_02669; phage(gi20065916) | 1e-118 | Click |
| 33 | 2588320..2589399 | PHAGE_Salmon_SPN9CC: hypothetical protein; SARI_02670; phage(gi389060507) | 0.0 | Click |
| 34 | complement(2589439..2589642) | hypothetical protein; SARI_02671 | N/A | Click |
| 35 | 2589984..2590346 | PHAGE_Salmon_epsilon34: N-like protein; SARI_02672; phage(gi221328661) | 4e-62 | Click |
| 36 | 2590424..2591704 | PHAGE_Entero_ES18: gp53; SARI_02673; phage(gi62362266) | 2e-111 | Click |
| 37 | 2592041..2592154 | PHAGE_Salmon_epsilon34: host-killing protein Kil; SARI_02674; phage(gi221328656) | 1e-14 | Click |
| 38 | 2592348..2593055 | PHAGE_Salmon_epsilon34: Conserved hypothetical protein; putative recombination protein; SARI_02675; phage(gi221328654) | 5e-130 | Click |
| 39 | 2593055..2593339 | PHAGE_Salmon_vB_SemP_Emek: Abc1; SARI_02676; phage(gi399498830) | 1e-46 | Click |
| 40 | 2593386..2593679 | PHAGE_Salmon_epsilon34: Abc2; anti-RecBCD; SARI_02677; phage(gi221328651) | 3e-50 | Click |
| 41 | 2593848..2594354 | PHAGE_Entero_P22: EaE; SARI_02678; phage(gi9635501) | 1e-62 | Click |
| 42 | 2594427..2594822 | PHAGE_Salmon_epsilon34: EaF-like protein; SARI_02679; phage(gi221328646) | 4e-63 | Click |
| 43 | 2594819..2595478 | PHAGE_Entero_ES18: gp41; SARI_02680; phage(gi62362254) | 1e-46 | Click |
| 44 | 2595480..2595749 | PHAGE_Salmon_epsilon34: EaD-like protein; SARI_02681; phage(gi221328645) | 3e-26 | Click |
| 45 | 2595752..2595937 | hypothetical protein; SARI_02682 | N/A | Click |
| 46 | 2595941..2596366 | PHAGE_Salmon_c341: DNA Repair ATPase; SARI_02683; phage(gi255252706) | 4e-67 | Click |
| 47 | 2596363..2596800 | PHAGE_Entero_ES18: gp37; SARI_02684; phage(gi62362250) | 3e-20 | Click |
| 48 | 2596797..2597447 | PHAGE_Escher_TL_2011c: hypothetical protein; SARI_02685; phage(gi418487081) | 4e-47 | Click |
| 49 | 2597512..2597790 | PHAGE_Salmon_SSU5: hypothetical protein; SARI_02686; phage(gi390013938) | 1e-29 | Click |
| 50 | 2598032..2598385 | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SARI_02687; phage(gi399498819) | 1e-61 | Click |
| 51 | 2598615..2599778 | PHAGE_Entero_ES18: gp34; SARI_02688; phage(gi62362247) | 0.0 | Click |
Region 6, total : 18 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3795969..3795982 | attL GATTCGCCGCCTGA | N/A | Click |
| 2 | 3800736..3803462 | PHAGE_Parame_AR158: hypothetical protein AR158_C785L; SARI_03870; phage(gi157953975) | 3e-44 | Click |
| 3 | complement(3803570..3803728) | hypothetical protein; SARI_03871 | N/A | Click |
| 4 | 3803774..3804289 | hypothetical protein; SARI_03872 | N/A | Click |
| 5 | complement(3804829..3807162) | PHAGE_Entero_P4: DNA primase; SARI_03873; phage(gi9627512) | 0.0 | Click |
| 6 | complement(3807177..3807497) | PHAGE_Entero_P4: hypothetical protein P4p07; SARI_03874; phage(gi9627513) | 2e-53 | Click |
| 7 | complement(3807494..3807754) | hypothetical protein; SARI_03875 | N/A | Click |
| 8 | complement(3807827..3808276) | PHAGE_Entero_P4: hypothetical protein P4p08; SARI_03876; phage(gi9627514) | 6e-60 | Click |
| 9 | complement(3808269..3808568) | PHAGE_Entero_P4: helper derepression protein; SARI_03877; phage(gi9627515) | 5e-30 | Click |
| 10 | complement(3808558..3809160) | PHAGE_Entero_P4: putative CI repressor; SARI_03878; phage(gi9627516) | 7e-49 | Click |
| 11 | complement(3809157..3809375) | PHAGE_Entero_P4: transcriptional regulator; SARI_03879; phage(gi9627517) | 2e-23 | Click |
| 12 | complement(3809765..3809917) | hypothetical protein; SARI_03881 | N/A | Click |
| 13 | 3809917..3810720 | PHAGE_Entero_P4: head size determination protein sid; SARI_03880; phage(gi9627518) | 1e-85 | Click |
| 14 | 3810717..3810962 | PHAGE_Erwini_ENT90: transcriptional regulator; SARI_03882; phage(gi431810990) | 2e-14 | Click |
| 15 | 3810979..3811545 | PHAGE_Entero_P4: amber mutation-suppressing protein; SARI_03883; phage(gi9627520) | 3e-59 | Click |
| 16 | complement(3811744..3813243) | PHAGE_Burkho_KS5: gp44; SARI_03884; phage(gi327198042) | 5e-05 | Click |
| 17 | complement(3813245..3813919) | hypothetical protein; SARI_03885 | N/A | Click |
| 18 | complement(3813909..3814100) | hypothetical protein; SARI_03886 | N/A | Click |
| 19 | complement(3814110..3815276) | PROPHAGE_Escher_CFT073: putative prophage integrase; SARI_03887; phage(gi26250313) | 2e-164 | Click |
| 20 | 3818207..3818220 | attR GATTCGCCGCCTGA | N/A | Click |