Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 35 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 904241..904255  attL    CAAACGGTAAAAAGT  N/A  Click
2 complement(907410..907730)  PHAGE_Entero_mEp213: hypothetical protein; Sbal195_0758; phage(gi428782634)  3e-14  Click
3 complement(907727..907957)  hypothetical protein; Sbal195_0759  N/A  Click
4 complement(907954..908232)  hypothetical protein; Sbal195_0760  N/A  Click
5 complement(908233..908526)  hypothetical protein; Sbal195_0761  N/A  Click
6 complement(908557..908904)  hypothetical protein; Sbal195_0762  N/A  Click
7 complement(908930..909190)  PHAGE_Entero_mEp460: hypothetical protein; Sbal195_0763; phage(gi428782341)  4e-14  Click
8 complement(909187..909540)  hypothetical protein; Sbal195_0764  N/A  Click
9 910685..911704  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp77; Sbal195_0765; phage(gi90592713)  1e-05  Click
10 complement(911814..912572)  hypothetical protein; Sbal195_0766  N/A  Click
11 complement(912572..913138)  hypothetical protein; Sbal195_0767  N/A  Click
12 complement(913214..913936)  PHAGE_Haemop_Aaphi23: putative CI protein; Sbal195_0768; phage(gi31544010)  3e-46  Click
13 913996..914199  PHAGE_Salico_CGphi29: hypothetical protein; Sbal195_0769; phage(gi472340163)  6e-09  Click
14 914231..914854  PHAGE_Pseudo_phi297: hypothetical protein; Sbal195_0770; phage(gi374531276)  2e-11  Click
15 915013..915618  hypothetical protein; Sbal195_0771  N/A  Click
16 915867..916136  hypothetical protein; Sbal195_0772  N/A  Click
17 916215..916964  PHAGE_Entero_mEp460: replication protein; Sbal195_0773; phage(gi428782359)  5e-37  Click
18 916961..917647  PHAGE_Pseudo_PAJU2: putative replication protein P; Sbal195_0774; phage(gi209552483)  9e-22  Click
19 917637..918893  PHAGE_Entero_mEp237: integrase; Sbal195_0775; phage(gi435439292)  1e-06  Click
20 918949..919167  XRE family transcriptional regulator; Sbal195_0776  N/A  Click
21 919154..919507  hypothetical protein; Sbal195_0777  N/A  Click
22 919516..920130  PHAGE_Ectoca_1: EsV-1-139; Sbal195_0778; phage(gi13242610)  1e-07  Click
23 920452..921129  hypothetical protein; Sbal195_0779  N/A  Click
24 921578..922111  PHAGE_Xantho_OP1: putative lysozyme; Sbal195_0780; phage(gi84662620)  1e-21  Click
25 922092..922595  PHAGE_Burkho_phiE202: gp42, protein LysB; Sbal195_0781; phage(gi134288770)  1e-04  Click
26 922706..923041  hypothetical protein; Sbal195_0782  N/A  Click
27 922995..923528  PHAGE_Entero_N15: gp1; Sbal195_0783; phage(gi9630465)  2e-37  Click
28 923503..925500  PHAGE_Entero_HK630: terminase large subunit A; Sbal195_0784; phage(gi428782789)  0.0  Click
29 925530..925736  PHAGE_Entero_mEp460: hypothetical protein; Sbal195_0785; phage(gi428782319)  2e-11  Click
30 925786..927360  PHAGE_Entero_mEp460: portal protein; Sbal195_0786; phage(gi428782320)  8e-127  Click
31 927332..929338  PHAGE_Entero_mEp460: putative protease/scaffold protein; Sbal195_0787; phage(gi428782321)  0.0  Click
32 929419..929742  PHAGE_Entero_mEp460: hypothetical protein; putative; phage RecA/RadA recombinase; Sbal195_0788(gi428782322)  5e-14  Click
33 929735..930079  hypothetical protein; Sbal195_0789  N/A  Click
34 930083..930640  hypothetical protein; Sbal195_0790  N/A  Click
35 930674..931099  hypothetical protein; Sbal195_0791  N/A  Click
36 931096..931815  PHAGE_Pseudo_F10: hypothetical protein PPF10_gp010; Sbal195_0792; phage(gi148912775)  2e-15  Click
37 935082..935096  attR    CAAACGGTAAAAAGT  N/A  Click
Region 2, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2335123..2335134  attL    GGCGAGTCGTTG  N/A  Click
2 2340853..2342847  PHAGE_Singap_iridovirus: hypothetical protein ORF140R; Sbal195_1957; phage(gi56692777)  8e-05  Click
3 2343061..2343148  tRNA  N/A  Click
4 complement(2343174..2344469)  PHAGE_Pseudo_phiCTX: integrase; Sbal195_1958; phage(gi17313264)  4e-60  Click
5 complement(2344469..2344681)  PHAGE_Bordet_1: Bbp49; Sbal195_1959; phage(gi41179409)  3e-05  Click
6 complement(2344788..2345135)  PHAGE_Entero_mEp213: hypothetical protein; Sbal195_1960; phage(gi428782634)  7e-14  Click
7 complement(2345144..2346694)  PHAGE_Pectob_ZF40: putative methylase; Sbal195_1961; phage(gi422936661)  1e-118  Click
8 complement(2346682..2346921)  hypothetical protein; Sbal195_1962  N/A  Click
9 complement(2346918..2347196)  hypothetical protein; Sbal195_1963  N/A  Click
10 complement(2347197..2347490)  hypothetical protein; Sbal195_1964  N/A  Click
11 complement(2347487..2348137)  PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; Sbal195_1965; phage(gi374531705)  2e-33  Click
12 complement(2348134..2348523)  hypothetical protein; Sbal195_1966  N/A  Click
13 complement(2348520..2349149)  PHAGE_Mycoba_Myrna: gp63; Sbal195_1967; phage(gi203454665)  2e-23  Click
14 complement(2349180..2349527)  hypothetical protein; Sbal195_1968  N/A  Click
15 complement(2349610..2349972)  hypothetical protein; Sbal195_1969  N/A  Click
16 2350168..2350179  attL    TGGGCAGTAATG  N/A  Click
17 complement(2350740..2351429)  PHAGE_Entero_IME10: repressor protein; Sbal195_1970; phage(gi422934295)  2e-43  Click
18 2351481..2351798  PHAGE_Stx2_c_II: Cro protein; Sbal195_1971; phage(gi302393139)  3e-06  Click
19 2351830..2352453  PHAGE_Pseudo_phi297: hypothetical protein; Sbal195_1972; phage(gi374531276)  3e-11  Click
20 2352459..2352785  PHAGE_Vibrio_SIO_2: hypothetical protein; Sbal195_1973; phage(gi371496373)  9e-08  Click
21 2352948..2353670  hypothetical protein; Sbal195_1974  N/A  Click
22 2353821..2354657  PHAGE_Entero_mEp460: replication protein; Sbal195_1975; phage(gi428782359)  5e-42  Click
23 2354654..2355340  PHAGE_Pseudo_PAJU2: putative replication protein P; Sbal195_1976; phage(gi209552483)  3e-21  Click
24 2355327..2355554  hypothetical protein; Sbal195_1977  N/A  Click
25 2355555..2356823  PHAGE_Sulfit_pCB2047_C: integrase; Sbal195_1978; phage(gi472341771)  5e-08  Click
26 2356898..2357113  XRE family transcriptional regulator; Sbal195_1979  N/A  Click
27 2357103..2357462  hypothetical protein; Sbal195_1980  N/A  Click
28 2358232..2359032  PHAGE_Salmon_7_11: hypothetical protein; Sbal195_1981; phage(gi345461254)  2e-13  Click
29 2372670..2372681  attR    TGGGCAGTAATG  N/A  Click
30 2373130..2373141  attR    GGCGAGTCGTTG  N/A  Click
Region 3, total : 39 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2526097..2526108  attL    GACTCATTAAAA  N/A  Click
2 complement(2526535..2527278)  PHAGE_Pseudo_MP22: c repressor; Sbal195_2114; phage(gi157834973)  2e-38  Click
3 2527788..2530004  PHAGE_Rhodov_RS1: integrase; Sbal195_2115; phage(gi472342882)  5e-56  Click
4 2530065..2530787  PHAGE_Rhodov_RS1: transposase; Sbal195_2116; phage(gi472342883)  4e-34  Click
5 2530793..2531329  hypothetical protein; Sbal195_2117  N/A  Click
6 2531326..2531841  PHAGE_Rhodov_RS1: hypothetical protein; Sbal195_2118; phage(gi472342885)  3e-15  Click
7 2531843..2532052  hypothetical protein; Sbal195_2119  N/A  Click
8 2532057..2532683  PHAGE_Pseudo_B3: hypothetical protein B3ORF6; Sbal195_2120; phage(gi56692574)  7e-49  Click
9 2532703..2533011  hypothetical protein; Sbal195_2121  N/A  Click
10 2533102..2533323  hypothetical protein; Sbal195_2122  N/A  Click
11 2533317..2533952  PHAGE_Entero_Mu: hypothetical protein Mup16; Sbal195_2123; phage(gi9633506)  3e-20  Click
12 2533945..2534400  PHAGE_Entero_Mu: putative transcription regulator; Sbal195_2124; phage(gi9633511)  2e-17  Click
13 2534605..2535264  hypothetical protein; Sbal195_2125  N/A  Click
14 2535300..2535857  hypothetical protein; Sbal195_2126  N/A  Click
15 2535899..2536354  hypothetical protein; Sbal195_2127  N/A  Click
16 2536446..2536757  hypothetical protein; Sbal195_2128  N/A  Click
17 2536747..2537313  PHAGE_Salmon_vB_SemP_Emek: lysin; Sbal195_2129; phage(gi399498856)  1e-18  Click
18 2537310..2537879  hypothetical protein; Sbal195_2130  N/A  Click
19 2537976..2538200  zinc finger-like protein; Sbal195_2131  N/A  Click
20 2538197..2538535  hypothetical protein; Sbal195_2132  N/A  Click
21 2538535..2538831  PHAGE_Entero_Mu: hypothetical protein Mup26; Sbal195_2133; phage(gi9633517)  1e-17  Click
22 2538834..2539403  PHAGE_Entero_Mu: hypothetical protein Mup27; Sbal195_2134; phage(gi9633518)  1e-52  Click
23 2539403..2541043  PHAGE_Entero_Mu: putative portal protein; Sbal195_2135; phage(gi9633519)  6e-128  Click
24 2541043..2542659  PHAGE_Entero_Mu: hypothetical protein Mup29; Sbal195_2136; phage(gi9633520)  8e-122  Click
25 2542652..2543971  PHAGE_Entero_Mu: virion morphogenesis late F orf; Sbal195_2137; phage(gi9633521)  3e-97  Click
26 2543981..2544433  PHAGE_Entero_Mu: putative virion morphogenesis protein; Sbal195_2138; phage(gi9633522)  3e-22  Click
27 complement(2544442..2545365)  hypothetical protein; Sbal195_2139  N/A  Click
28 2545458..2546093  hypothetical protein; Sbal195_2140  N/A  Click
29 2546282..2547163  PHAGE_Lactob_A2: hypothetical protein A2p19; Sbal195_2141; phage(gi22296541)  5e-10  Click
30 2547404..2547769  hypothetical protein; Sbal195_2142  N/A  Click
31 2547863..2549023  PHAGE_Entero_Mu: putative protease protein; Sbal195_2143; phage(gi9633523)  5e-60  Click
32 2549023..2549943  PHAGE_Entero_Mu: major head subunit; Sbal195_2144; phage(gi9633525)  5e-83  Click
33 2550027..2550536  PHAGE_Pseudo_B3: hypothetical protein B3ORF39; Sbal195_2145; phage(gi56692608)  9e-06  Click
34 2550539..2550991  PHAGE_Entero_Mu: hypothetical protein Mup36; Sbal195_2146; phage(gi9633527)  5e-19  Click
35 2550991..2551434  hypothetical protein; Sbal195_2147  N/A  Click
36 2551463..2552209  PHAGE_Stenot_S1: putative tail protein a; Sbal195_2148; phage(gi213163914)  2e-09  Click
37 2552329..2556255  PHAGE_Mannhe_phiMHaA1: tail protein T; Sbal195_2149; phage(gi109289951)  6e-28  Click
38 2556252..2556617  hypothetical protein; Sbal195_2150  N/A  Click
39 2556645..2559119  PHAGE_Stenot_S1: putative tail protein b; Sbal195_2151; phage(gi213163918)  1e-36  Click
40 2559131..2560135  PHAGE_Stenot_S1: hypothetical protein StPS1_gp20; Sbal195_2152; phage(gi213163919)  1e-10  Click
41 2565476..2565487  attR    GACTCATTAAAA  N/A  Click
Region 4, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2704745..2705557)  PHAGE_Entero_Sf6: putative transposase OrfB; Sbal195_2282; phage(gi41057343)  1e-108  Click
2 complement(2705611..2705922)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; Sbal195_2283; phage(gi24373865)  3e-06  Click
3 2706012..2706782  PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; Sbal195_2284; phage(gi399528790)  3e-42  Click
4 2706866..2707183  hypothetical protein; Sbal195_2285  N/A  Click
5 2707693..2708475  hypothetical protein; Sbal195_2286  N/A  Click
6 2709339..2710094  hypothetical protein; Sbal195_2287  N/A  Click
7 2710242..2710751  hypothetical protein; Sbal195_2288  N/A  Click
8 complement(2711633..2711818)  hypothetical protein; Sbal195_2289  N/A  Click
9 complement(2711997..2712329)  PHAGE_Xantho_Cf1c: V protein; Sbal195_2290; phage(gi17975750)  2e-07  Click
10 complement(2712335..2713453)  PHAGE_Entero_If1: hypothetical protein If1p10; Sbal195_2291; phage(gi9630757)  8e-52  Click
11 2713601..2713984  PHAGE_Haemop_SuMu: transcription regulator; Sbal195_2292; phage(gi418489036)  1e-05  Click
12 complement(2715088..2715273)  hypothetical protein; Sbal195_2293  N/A  Click
13 complement(2715452..2715784)  PHAGE_Xantho_Cf1c: V protein; Sbal195_2294; phage(gi17975750)  2e-07  Click
14 complement(2715790..2716908)  PHAGE_Entero_If1: hypothetical protein If1p10; Sbal195_2295; phage(gi9630757)  8e-52  Click
15 2717056..2717439  PHAGE_Haemop_SuMu: transcription regulator; Sbal195_2296; phage(gi418489036)  1e-05  Click
16 complement(2718543..2718728)  hypothetical protein; Sbal195_2297  N/A  Click
17 complement(2718907..2719239)  PHAGE_Xantho_Cf1c: V protein; Sbal195_2298; phage(gi17975750)  2e-07  Click
18 complement(2719245..2720363)  PHAGE_Entero_If1: hypothetical protein If1p10; Sbal195_2299; phage(gi9630757)  8e-52  Click
19 2720511..2720894  PHAGE_Haemop_SuMu: transcription regulator; Sbal195_2300; phage(gi418489036)  1e-05  Click
20 2721977..2721989  attL    GTTATCGGCATTA  N/A  Click
21 complement(2721998..2722183)  hypothetical protein; Sbal195_2301  N/A  Click
22 complement(2722362..2722694)  PHAGE_Xantho_Cf1c: V protein; Sbal195_2302; phage(gi17975750)  2e-07  Click
23 complement(2722700..2723818)  PHAGE_Entero_If1: hypothetical protein If1p10; Sbal195_2303; phage(gi9630757)  8e-52  Click
24 2723966..2724349  PHAGE_Haemop_SuMu: transcription regulator; Sbal195_2304; phage(gi418489036)  1e-05  Click
25 complement(2725397..2726206)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; Sbal195_2305; phage(gi24373866)  4e-150  Click
26 complement(2726266..2726556)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; Sbal195_2306; phage(gi24373865)  7e-48  Click
27 2726669..2726681  attR    GTTATCGGCATTA  N/A  Click
Region 5, total : 30 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3439392..3439658)  PHAGE_Burkho_phiE202: gp19, conserved hypothetical protein; Sbal195_2888; phage(gi134288771)  6e-10  Click
2 complement(3439856..3440983)  PHAGE_Ralsto_phiRSA1: bacteriophage gpD; Sbal195_2889; phage(gi145708106)  5e-96  Click
3 complement(3440980..3441429)  PHAGE_Ralsto_phiRSA1: bacteriophage gpU; Sbal195_2890; phage(gi145708105)  7e-37  Click
4 complement(3441432..3445082)  PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; Sbal195_2891; phage(gi428782750)  1e-118  Click
5 complement(3445091..3445219)  PHAGE_Yersin_413C: gpE+E'; Sbal195_2892; phage(gi30065728)  4e-08  Click
6 complement(3445246..3445527)  PHAGE_Ralsto_phiRSA1: bacteriophage gpE; Sbal195_2893; phage(gi145708103)  5e-19  Click
7 complement(3445664..3446179)  PHAGE_Salmon_RE_2010: major tail tube protein; Sbal195_2894; phage(gi418489721)  8e-61  Click
8 complement(3446189..3447358)  PHAGE_Ralsto_phiRSA1: major tail seath protein gpFI; Sbal195_2895; phage(gi145708101)  5e-158  Click
9 complement(3447477..3447761)  PHAGE_Vibrio_VHML: ORF38; Sbal195_2896; phage(gi27311205)  2e-30  Click
10 complement(3447889..3449121)  PHAGE_Vibrio_VHML: ORF35; Sbal195_2897; phage(gi27311203)  0.0  Click
11 complement(3449124..3449654)  PHAGE_Halomo_1: putative tail protein; Sbal195_2898; phage(gi167832358)  4e-31  Click
12 complement(3449654..3450430)  PHAGE_Vibrio_vB_VpaM_MAR: tail protein; Sbal195_2899; phage(gi428782739)  1e-78  Click
13 complement(3450423..3451352)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; Sbal195_2900; phage(gi428782738)  3e-89  Click
14 complement(3451345..3451701)  PHAGE_Ralsto_phiRSA1: gpW/gp25 family protein; Sbal195_2901; phage(gi145708094)  7e-24  Click
15 complement(3451698..3452306)  PHAGE_Ralsto_phiRSA1: baseplate assembly protein V; Sbal195_2902; phage(gi145708093)  6e-35  Click
16 3452646..3454007  PHAGE_Burkho_KS9: hypothetical protein gp32; Sbal195_2903; phage(gi255033715)  1e-08  Click
17 3453991..3454821  PHAGE_Burkho_KS9: hypothetical protein gp33; Sbal195_2904; phage(gi255033716)  3e-08  Click
18 complement(3455035..3455499)  PHAGE_Erwini_ENT90: phage virion morphogenesis protein; Sbal195_2905; phage(gi431810964)  8e-24  Click
19 complement(3455481..3455954)  PHAGE_Ralsto_phiRSA1: tail completion protein-like protein; Sbal195_2906; phage(gi145708090)  2e-35  Click
20 complement(3456080..3456550)  PHAGE_Entero_2: P2 LysB-like protein; Sbal195_2907; phage(gi169936038)  6e-16  Click
21 complement(3456534..3457355)  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp14; Sbal195_2908; phage(gi145708088)  2e-63  Click
22 complement(3457361..3457684)  PHAGE_Ralsto_phiRSA1: phage-related transmembrane protein; Sbal195_2909; phage(gi145708087)  4e-10  Click
23 complement(3457681..3458058)  PHAGE_Ralsto_phiRSA1: phage-related transmembrane protein; Sbal195_2910; phage(gi145708086)  4e-15  Click
24 complement(3458061..3458270)  PHAGE_Ralsto_phiRSA1: phage tail X; Sbal195_2911; phage(gi145708085)  3e-13  Click
25 complement(3458279..3458740)  PHAGE_Ralsto_phiRSA1: head completion/stabilization protein L; Sbal195_2912; phage(gi145708084)  8e-34  Click
26 complement(3458842..3459546)  PHAGE_Ralsto_phiRSA1: terminase; Sbal195_2913; phage(gi145708083)  2e-47  Click
27 complement(3459549..3460553)  PHAGE_Ralsto_phiRSA1: P2 family phage major capsid protein; Sbal195_2914; phage(gi145708082)  6e-122  Click
28 complement(3460563..3461372)  PHAGE_Ralsto_phiRSA1: phage capsid scaffolding protein; Sbal195_2915; phage(gi145708081)  2e-66  Click
29 3461525..3463294  PHAGE_Ralsto_phiRSA1: terminase; Sbal195_2916; phage(gi145708080)  0.0  Click
30 3463294..3464340  PHAGE_Ralsto_phiRSA1: bacteriophage gpQ; Sbal195_2917; phage(gi145708079)  9e-113  Click
Region 6, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3648865..3649680)  PHAGE_Entero_EPS7: putative phage tail protein; Sbal195_3077; phage(gi182682945)  2e-05  Click
2 3649361..3649415  attL    CTGGTAGAGTTTGCACCGTTAACCGCCTGAACACTCAAATCACGCATACGTTGCA  N/A  Click
3 complement(3649944..3650129)  PROPHAGE_Shewan_MR-1: transposase, putative; Sbal195_3078; phage(gi24373689)  1e-08  Click
4 complement(3650429..3650785)  PROPHAGE_Shewan_MR-1: transposase, putative; Sbal195_3080; phage(gi24373689)  3e-35  Click
5 complement(3650786..3651064)  PROPHAGE_Shewan_MR-1: transposase, putative; Sbal195_3081; phage(gi24373689)  2e-20  Click
6 complement(3651245..3652078)  PHAGE_Entero_Sf6: putative transposase OrfB; Sbal195_3082; phage(gi41057343)  1e-103  Click
7 complement(3652117..3652242)  PHAGE_Entero_Sf6: gene 56 protein; Sbal195_3083; phage(gi41057344)  4e-10  Click
8 3652923..3652977  attR    CTGGTAGAGTTTGCACCGTTAACCGCCTGAACACTCAAATCACGCATACGTTGCA  N/A  Click