Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 89783..91120  PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; Dshi_0091; phage(gi16129784)  9e-34  Click
2 91122..91604  PHAGE_Entero_RB16: NudE nudix hydrolase; Dshi_0092; phage(gi304373727)  9e-07  Click
3 complement(91896..92264)  hypothetical protein; Dshi_0093  N/A  Click
4 complement(92411..93343)  PHAGE_Haemop_SuMu: bacteriophage Mu I protein gp32; Dshi_0094; phage(gi418489085)  1e-21  Click
5 complement(93348..94247)  PHAGE_Pseudo_DMS3: hypothetical protein DMS3-33; Dshi_0095; phage(gi119953658)  1e-66  Click
6 complement(94244..94774)  hypothetical protein; Dshi_0096  N/A  Click
7 complement(95154..95567)  PHAGE_Burkho_BcepMu: gp02; Dshi_0097; phage(gi48696912)  4e-08  Click
8 complement(95564..96019)  hypothetical protein; Dshi_0098  N/A  Click
9 complement(96161..96931)  PHAGE_Entero_Mu: DNA transposition protein; Dshi_0099; phage(gi9633513)  4e-08  Click
10 complement(96999..98882)  PHAGE_Pseudo_DMS3: putative A transposase; Dshi_0100; phage(gi119953629)  3e-11  Click
11 99281..99538  hypothetical protein; Dshi_0101  N/A  Click
12 99840..102824  PHAGE_Mycoba_Troll4: gp66; Dshi_0102; phage(gi206599860)  7e-54  Click
Region 2, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2291686..2292393)  PHAGE_Roseob_1: ribonuclease III; Dshi_2162; phage(gi331028139)  8e-13  Click
2 complement(2292386..2296303)  PHAGE_Roseob_1: gene transfer agent; Dshi_2163; phage(gi331028138)  0.0  Click
3 complement(2296307..2296747)  PHAGE_Roseob_1: phage cell wall peptidase; Dshi_2164; phage(gi331028137)  2e-31  Click
4 complement(2296744..2297634)  PHAGE_Roseob_1: gene transfer agent; Dshi_2165; phage(gi331028136)  1e-58  Click
5 complement(2297631..2298263)  PHAGE_Roseob_1: putative glycoside hydrolase; Dshi_2166; phage(gi331028135)  4e-43  Click
6 complement(2298277..2298945)  PHAGE_Shigel_EP23: phage tail length tape-measure protein 1; Dshi_2167; phage(gi371496286)  9e-16  Click
7 complement(2298929..2299144)  hypothetical protein; Dshi_2168  N/A  Click
8 complement(2299141..2299470)  hypothetical protein; Dshi_2169  N/A  Click
9 complement(2299476..2299889)  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Dshi_2170; phage(gi461474972)  3e-21  Click
10 complement(2299911..2300321)  hypothetical protein; Dshi_2171  N/A  Click
11 complement(2300318..2300656)  hypothetical protein; Dshi_2172  N/A  Click
12 complement(2300653..2301243)  hypothetical protein; Dshi_2173  N/A  Click
13 complement(2301398..2302615)  PHAGE_Salmon_ST64B: Major capsid protein precursor; Dshi_2174; phage(gi23505451)  4e-69  Click
14 complement(2302612..2303229)  PHAGE_Azospi_Cd: phage head maturation protease; Dshi_2175; phage(gi168495135)  5e-28  Click
15 complement(2303242..2303508)  hypothetical protein; Dshi_2176  N/A  Click
16 complement(2303499..2304689)  PHAGE_Marino_P12026: phage portal protein, HK97 family; Dshi_2177; phage(gi399528319)  1e-19  Click
17 complement(2304797..2306155)  PHAGE_Strept_6: terminase large subunit; Dshi_2178; phage(gi93007440)  4e-58  Click