Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 934564..934575  attL    GGGGCGCAGAAC  N/A  Click
2 complement(934780..935934)  PHAGE_Burkho_phiE202: gp10, site-specific recombinase, phage integrase family; AZC_0828; phage(gi134288747)  1e-14  Click
3 complement(936065..936238)  hypothetical protein; AZC_0829  N/A  Click
4 complement(936267..936809)  hypothetical protein; AZC_0830  N/A  Click
5 complement(936882..937787)  PHAGE_Staphy_2638A: ORF016; AZC_0831; phage(gi66395466)  1e-05  Click
6 937919..938428  hypothetical protein; AZC_0832  N/A  Click
7 939095..939307  hypothetical protein; AZC_0833  N/A  Click
8 939304..940725  PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; AZC_0834; phage(gi28876155)  1e-42  Click
9 940725..941753  PHAGE_Entero_phiP27: hypothetical protein P27p17; AZC_0835; phage(gi18249881)  1e-06  Click
10 941795..942451  hypothetical protein; AZC_0836  N/A  Click
11 942910..943572  PHAGE_Xylell_Xfas53: gp30; AZC_0837; phage(gi273810449)  5e-08  Click
12 943583..944194  PHAGE_Pseudo_tf: terminase large subunit; AZC_0838; phage(gi388604636)  1e-44  Click
13 944187..944942  PHAGE_Xylell_Xfas53: TerL; AZC_0839; phage(gi273810450)  8e-83  Click
14 944939..946882  PHAGE_Erwini_PEp14: putative portal protein; AZC_0840; phage(gi374531855)  8e-37  Click
15 953260..953271  attR    GGGGCGCAGAAC  N/A  Click
Region 2, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1238332..1239504  PHAGE_Marino_P12026: phage portal protein, HK97 family; AZC_1109; phage(gi399528319)  2e-26  Click
2 1239517..1239702  hypothetical protein; AZC_1110  N/A  Click
3 1239936..1240118  hypothetical protein; AZC_1111  N/A  Click
4 1240310..1240648  PHAGE_Tetras_SI1: phage prohead protease; AZC_1112; phage(gi472342256)  5e-08  Click
5 1240675..1241919  PHAGE_Salmon_ST64B: Major capsid protein precursor; AZC_1113; phage(gi23505451)  2e-76  Click
6 complement(1241939..1242706)  PHAGE_Neodip_NPV: hypothetical protein; AZC_1114; phage(gi48843635)  8e-14  Click
7 1242801..1243385  PHAGE_Rhodob_RcapNL: hypothetical protein; AZC_1115; phage(gi461474967)  6e-10  Click
8 1243382..1243711  putative phage head-tail adaptor; AZC_1116  N/A  Click
9 1243896..1244309  PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; AZC_1117; phage(gi461474971)  2e-13  Click
10 1244336..1244743  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; AZC_1118; phage(gi461474972)  5e-20  Click
11 1244740..1245099  putative gene transfer agent (GTA) protein; AZC_1119  N/A  Click
12 1245135..1245302  hypothetical protein; AZC_1120  N/A  Click
13 1245311..1245976  PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; AZC_1121; phage(gi428782128)  8e-15  Click
14 complement(1245994..1246575)  hypothetical protein; AZC_1122  N/A  Click
15 complement(1246607..1247371)  PHAGE_Equid__4: large tegument protein; AZC_1123; phage(gi9629749)  3e-36  Click
16 1247498..1248118  PHAGE_Roseob_1: putative glycoside hydrolase; AZC_1124; phage(gi331028135)  2e-37  Click
17 1248126..1249010  PHAGE_Tetras_SI1: hypothetical protein; AZC_1125; phage(gi472342235)  2e-25  Click
18 1249007..1249444  PHAGE_Roseob_1: phage cell wall peptidase; AZC_1126; phage(gi331028137)  4e-31  Click
19 1249484..1253383  PHAGE_Tetras_SI1: hypothetical protein; AZC_1127; phage(gi472342233)  3e-32  Click
20 1253415..1254890  PHAGE_Tetras_SI1: hypothetical protein; AZC_1128; phage(gi472342232)  4e-09  Click
Region 3, total : 37 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2441852..2442394)  PHAGE_Pseudo_MP29: c repressor; AZC_2124; phage(gi215479977)  5e-06  Click
2 2442583..2442888  PHAGE_Escher_D108: Ner; AZC_2125; phage(gi281199646)  3e-07  Click
3 2442885..2443061  hypothetical protein; AZC_2126  N/A  Click
4 2443095..2443553  PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; AZC_2127; phage(gi356870852)  1e-24  Click
5 2443370..2443382  attL    CGCCCTCATCGAC  N/A  Click
6 2443550..2445727  PHAGE_Rhodob_RC1: integrase; AZC_2128; phage(gi472339716)  9e-122  Click
7 2445751..2446518  PHAGE_Pseudo_JBD88a: hypothetical protein; AZC_2129; phage(gi448244692)  8e-46  Click
8 2446520..2447140  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2130; phage(gi472339714)  1e-12  Click
9 2447137..2447520  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2131; phage(gi472339713)  4e-18  Click
10 2447846..2448424  putative chromosomal replication initiator protein; AZC_2132  N/A  Click
11 2448435..2449061  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2133; phage(gi472339708)  7e-58  Click
12 2449251..2449856  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2134; phage(gi472339703)  3e-26  Click
13 2449853..2450239  PHAGE_Burkho_KS10: hypothetical protein KS10_gp27; AZC_2135; phage(gi198449289)  3e-07  Click
14 complement(2450402..2454925)  hypothetical protein; AZC_2136  N/A  Click
15 2455359..2456120  PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; AZC_2137; phage(gi169257296)  1e-18  Click
16 2456120..2456617  PHAGE_Thalas_BA3: hypothetical protein BA3_0023; AZC_2138; phage(gi160700617)  2e-11  Click
17 2456621..2457004  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2139; phage(gi472339696)  2e-07  Click
18 2457001..2457300  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2140; phage(gi472339695)  1e-30  Click
19 2457297..2457902  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2141; phage(gi472339694)  1e-31  Click
20 2457899..2459533  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2142; phage(gi472339692)  3e-175  Click
21 2459530..2461113  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2143; phage(gi472339690)  8e-75  Click
22 2461118..2462350  PHAGE_Escher_D108: virion morphogenesis; AZC_2144; phage(gi281199673)  6e-35  Click
23 2462531..2463382  hypothetical protein; AZC_2145  N/A  Click
24 2463557..2465197  hypothetical protein; AZC_2146  N/A  Click
25 2465495..2466448  PHAGE_Rhodob_RC1: I protein; AZC_2147; phage(gi472339684)  6e-20  Click
26 2466473..2466880  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2148; phage(gi472339683)  8e-23  Click
27 2466913..2467815  PHAGE_Rhodob_RC1: major head subunit; AZC_2149; phage(gi472339682)  2e-66  Click
28 2467824..2468093  PHAGE_Rhodob_RC1: hypothetical protein; AZC_2150; phage(gi472339681)  3e-05  Click
29 2468199..2468675  hypothetical protein; AZC_2151  N/A  Click
30 2468672..2469157  PHAGE_Rhodob_RcapMu: virion morphogenesis protein; AZC_2152; phage(gi356870876)  3e-12  Click
31 2469154..2469789  hypothetical protein; AZC_2153  N/A  Click
32 2469786..2470334  PHAGE_Halomo_1: putative baseplate assembly protein V; AZC_2154; phage(gi167832354)  9e-13  Click
33 2470343..2470585  hypothetical protein; AZC_2155  N/A  Click
34 2470611..2471024  PHAGE_Pseudo_phiCTX: predicted baseplate; AZC_2156; phage(gi17313236)  2e-09  Click
35 2471021..2471935  PHAGE_Erwini_ENT90: baseplate assembly protein; AZC_2157; phage(gi431810943)  3e-30  Click
36 2471932..2472567  PHAGE_Burkho_phiE202: gp33, phage tail protein I; AZC_2158; phage(gi134288744)  2e-09  Click
37 2472579..2474843  hypothetical protein; AZC_2159  N/A  Click
38 2475018..2476859  PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AZC_2160; phage(gi169257320)  2e-09  Click
39 2480278..2480290  attR    CGCCCTCATCGAC  N/A  Click
Region 4, total : 38 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4097072..4097084  attL    GCCCGGTCACAGG  N/A  Click
2 complement(4097163..4098284)  PHAGE_Pelagi_HTVC019P: integrase; AZC_3570; phage(gi460042383)  3e-27  Click
3 complement(4098941..4099345)  hypothetical protein; AZC_3571  N/A  Click
4 complement(4099687..4100016)  hypothetical protein; AZC_3572  N/A  Click
5 complement(4100115..4100903)  PHAGE_Helico_2: hypothetical protein; AZC_3573; phage(gi370703036)  1e-05  Click
6 4102528..4102659  hypothetical protein; AZC_3574  N/A  Click
7 complement(4103040..4104749)  PHAGE_Pelagi_HTVC011P: DNA maturase B; AZC_3575; phage(gi460042368)  2e-174  Click
8 complement(4104853..4105077)  PHAGE_Pelagi_HTVC011P: DNA maturase A; AZC_3576; phage(gi460042367)  8e-12  Click
9 complement(4105074..4105295)  hypothetical protein; AZC_3577  N/A  Click
10 complement(4105311..4105802)  PHAGE_Vibrio_VHML: ORF38; AZC_3578; phage(gi27311205)  3e-06  Click
11 complement(4105809..4107410)  PHAGE_Entero_T7: tail fiber protein; AZC_3579; phage(gi9627477)  2e-25  Click
12 complement(4107468..4111145)  PHAGE_Pelagi_HTVC011P: internal virion protein D; AZC_3580; phage(gi460042358)  3e-66  Click
13 complement(4111154..4113484)  PHAGE_Microc_LMM01: lysozyme/metalloendopeptidase; AZC_3581; phage(gi117530266)  3e-05  Click
14 complement(4113481..4114461)  PHAGE_Synech_S_RIP1: hypothetical protein; AZC_3582; phage(gi472342934)  7e-06  Click
15 complement(4114697..4117054)  PHAGE_Pelagi_HTVC011P: tail tubular protein B; AZC_3583; phage(gi460042354)  2e-164  Click
16 complement(4117058..4117660)  PHAGE_Pelagi_HTVC011P: tail tubular protein A; AZC_3584; phage(gi460042353)  4e-31  Click
17 complement(4117762..4118757)  PHAGE_Pelagi_HTVC011P: capsid protein; AZC_3585; phage(gi460042352)  1e-70  Click
18 complement(4119275..4119475)  hypothetical protein; AZC_3586  N/A  Click
19 complement(4119485..4120243)  PHAGE_Pelagi_HTVC011P: scaffolding protein; AZC_3587; phage(gi460042348)  2e-30  Click
20 complement(4120416..4121951)  PHAGE_Pelagi_HTVC011P: head-to-tail joining protein; AZC_3588; phage(gi460042347)  3e-126  Click
21 complement(4122652..4124646)  PHAGE_Celeri_P12053L: class II ribonucleotide reductase; AZC_3589; phage(gi399528869)  0.0  Click
22 complement(4124621..4125082)  PHAGE_Cyanop_NATL1A_7: gp32; AZC_3590; phage(gi372217788)  3e-17  Click
23 complement(4125085..4125462)  PHAGE_Mycoba_Omega: gp174; AZC_3591; phage(gi29566909)  2e-23  Click
24 complement(4125501..4126244)  PHAGE_Prochl_P_SSP10: hypothetical protein; AZC_3592; phage(gi472339140)  3e-43  Click
25 complement(4126229..4126480)  PHAGE_Mycoba_Che12: gp59; AZC_3593; phage(gi109392509)  2e-05  Click
26 complement(4126473..4126673)  hypothetical protein; AZC_3594  N/A  Click
27 complement(4126678..4127406)  PHAGE_Vibrio_VBP47: thymidylate synthase; AZC_3595; phage(gi472340600)  2e-44  Click
28 complement(4127420..4127611)  hypothetical protein; AZC_3596  N/A  Click
29 complement(4127616..4129445)  PHAGE_Pelagi_HTVC011P: DNA polymerase family A; AZC_3597; phage(gi460042339)  2e-133  Click
30 complement(4129516..4131171)  PHAGE_Pelagi_HTVC011P: DNA primase; AZC_3598; phage(gi460042337)  8e-133  Click
31 complement(4131168..4131386)  hypothetical protein; AZC_3599  N/A  Click
32 complement(4131386..4131634)  PHAGE_Celeri_P12053L: hypothetical protein; AZC_3600; phage(gi399528841)  2e-08  Click
33 complement(4131729..4132214)  PHAGE_Klebsi_KP32: lysozyme; AZC_3601; phage(gi281416293)  1e-31  Click
34 complement(4132615..4133331)  PHAGE_Pelagi_HTVC011P: single-stranded DNA-binding protein; AZC_3602; phage(gi460042334)  7e-17  Click
35 complement(4133328..4133636)  hypothetical protein; AZC_3603  N/A  Click
36 complement(4133637..4133933)  hypothetical protein; AZC_3604  N/A  Click
37 complement(4134102..4134455)  hypothetical protein; AZC_3605  N/A  Click
38 complement(4134583..4135323)  PHAGE_Lactoc_T: hypothetical protein BK5-Tp38; AZC_3606; phage(gi14251162)  1e-19  Click
39 complement(4135426..4137951)  PHAGE_Pelagi_HTVC019P: RNA polymerase; AZC_3607; phage(gi460042384)  3e-151  Click
40 4138015..4138027  attR    GCCCGGTCACAGG  N/A  Click
Region 5, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4561920..4561931  attL    CCGCCGCCGCGC  N/A  Click
2 4563260..4563979  PHAGE_Plankt_PaV_LD: ABC transporter; AZC_3995; phage(gi371496158)  8e-37  Click
3 4563976..4564899  PHAGE_Pseudo_MP22: putative tail component protein; AZC_3996; phage(gi157835013)  4e-05  Click
4 4565050..4565775  PHAGE_Ambyst_virus: unknown; AZC_3997; phage(gi45686081)  2e-05  Click
5 4565880..4566812  PHAGE_Cronob_vB_CsaP_GAP52: putative ribose-phosphate pyrophosphokinase; AZC_3998; phage(gi414087562)  1e-25  Click
6 complement(4567080..4567850)  phosphoesterase; AZC_3999  N/A  Click
7 4567952..4568431  hypothetical protein; AZC_4000  N/A  Click
8 4568460..4568861  inner membrane protein; AZC_4001  N/A  Click
9 complement(4568939..4569625)  PHAGE_Ectoca_1: hypothetical protein Esvgp177; AZC_4002; phage(gi19343415)  5e-05  Click
10 4569471..4569482  attR    CCGCCGCCGCGC  N/A  Click
11 4569707..4570690  PHAGE_Mycoba_BPs: integrase; AZC_4003; phage(gi189043119)  2e-17  Click