Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 398922..398935  attL    TATGTATCGTCTGG  N/A  Click
2 406249..406821  PHAGE_Pseudo_Pf1: hypothetical protein Pf1p05; Spro_0354; phage(gi9625371)  5e-06  Click
3 complement(406808..407482)  PROPHAGE_Xantho_33913: Tn5041 transposase; Spro_0355; phage(gi21231545)  3e-20  Click
4 407515..408558  PROPHAGE_Escher_CFT073: transposase; Spro_0356; phage(gi26248360)  5e-71  Click
5 408555..409343  PROPHAGE_Escher_CFT073: transposase/IS protein; Spro_0357; phage(gi26248359)  6e-76  Click
6 complement(409383..410204)  PROPHAGE_Xantho_33913: Tn5041 transposase; Spro_0358; phage(gi21231545)  6e-07  Click
7 complement(411176..411460)  PROPHAGE_Xantho_33913: ISxac3 transposase; Spro_0361; phage(gi21231087)  2e-21  Click
8 425399..425412  attR    TATGTATCGTCTGG  N/A  Click
Region 2, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(952334..952552)  PHAGE_Yersin_413C: Ogr; Spro_0856; phage(gi30065732)  9e-22  Click
2 complement(952641..953732)  PHAGE_Yersin_413C: gpD; Spro_0857; phage(gi30065731)  1e-98  Click
3 complement(953729..954202)  PHAGE_Yersin_413C: gpU; Spro_0858; phage(gi30065730)  8e-48  Click
4 complement(954219..956324)  PHAGE_Erwini_ENT90: phage tail measure protein; Spro_0859; phage(gi431810935)  9e-26  Click
5 complement(956317..956451)  PHAGE_Yersin_413C: gpE+E'; Spro_0860; phage(gi30065728)  1e-11  Click
6 complement(956472..956759)  PHAGE_Yersin_413C: gpE; Spro_0861; phage(gi30065727)  1e-26  Click
7 complement(956824..957333)  PHAGE_Yersin_413C: FII; Spro_0862; phage(gi30065726)  1e-59  Click
8 complement(957347..958516)  PHAGE_Yersin_413C: gpFI; Spro_0863; phage(gi30065725)  2e-171  Click
9 complement(958660..959214)  PHAGE_Yersin_413C: gpG; Spro_0864; phage(gi30065723)  1e-29  Click
10 complement(959216..960880)  PHAGE_Yersin_413C: gpH; Spro_0865; phage(gi30065722)  7e-53  Click
11 complement(960877..964170)  PHAGE_Salmon_7_11: hypothetical protein; Spro_0866; phage(gi345461121)  0.0  Click
12 complement(964163..965071)  PHAGE_Yersin_413C: gpJ; Spro_0867; phage(gi30065720)  2e-120  Click
13 complement(965076..965426)  PHAGE_Yersin_413C: gpW; Spro_0868; phage(gi30065719)  4e-33  Click
14 complement(965423..966058)  PHAGE_Yersin_413C: gpV; Spro_0869; phage(gi30065718)  7e-68  Click
15 complement(966147..966611)  PHAGE_Yersin_413C: gpR; Spro_0870; phage(gi30065716)  8e-34  Click
16 complement(966651..967163)  PHAGE_Salmon_RE_2010: lysozyme; Spro_0871; phage(gi418489704)  1e-53  Click
17 complement(967147..967365)  PHAGE_Erwini_ENT90: hypothetical protein; Spro_0872; phage(gi431810988)  3e-10  Click
18 complement(967369..967572)  PHAGE_Yersin_413C: gpX; Spro_0873; phage(gi30065711)  4e-16  Click
19 complement(968036..970099)  PHAGE_Yersin_413C: gpA; Spro_0874; phage(gi30065742)  0.0  Click
20 complement(970104..970325)  PHAGE_Yersin_413C: hypothetical protein L-413Cp36; Spro_0875; phage(gi30065740)  9e-13  Click
21 complement(970400..970705)  gpB bacteriophage P2-like protein; Spro_0876  N/A  Click
22 970971..971837  PHAGE_Entero_PsP3: CI; Spro_0877; phage(gi41057393)  1e-82  Click
Region 3, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2219758..2219773  attL    AACGGGAGCCTGATGG  N/A  Click
2 2224410..2225261  PROPHAGE_Escher_CFT073: transposase insF; Spro_2030; phage(gi26250329)  4e-97  Click
3 complement(2225496..2226161)  hypothetical protein; Spro_2031  N/A  Click
4 complement(2226145..2226987)  PHAGE_Entero_mEp390: hypothetical protein; Spro_2032; phage(gi428782698)  1e-74  Click
5 complement(2229342..2230190)  hypothetical protein; Spro_2033  N/A  Click
6 complement(2230635..2231279)  PHAGE_Entero_mEp460: prophage repressor; Spro_2034; phage(gi428782354)  5e-42  Click
7 2231371..2231598  PHAGE_Entero_c_1: prophage antirepressor; Spro_2035; phage(gi428781783)  5e-11  Click
8 2231614..2231901  PHAGE_Bacill_B103: morphogenesis protein; Spro_2036; phage(gi22855163)  9e-11  Click
9 2231898..2232281  hypothetical protein; Spro_2037  N/A  Click
10 2232949..2233230  hypothetical protein; Spro_2038  N/A  Click
11 2233913..2234320  hypothetical protein; Spro_2039  N/A  Click
12 2234415..2234675  PHAGE_Pectob_ZF40: putative DNA polymerase; Spro_2040; phage(gi422936677)  2e-25  Click
13 2235519..2236073  PHAGE_Entero_HK630: terminase small subunit nu1; Spro_2041; phage(gi428782788)  8e-70  Click
14 2236048..2237973  PHAGE_Entero_HK630: terminase large subunit A; Spro_2042; phage(gi428782789)  0.0  Click
15 2238059..2238805  PROPHAGE_Xylell_Temecula1: contractile tail sheath protein; Spro_2043; phage(gi28198986)  2e-15  Click
16 2238805..2239263  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; Spro_2044; phage(gi428782751)  2e-20  Click
17 2239457..2240578  PROPHAGE_Xylell_Temecula1: phage-related tail protein; Spro_2045; phage(gi28198980)  8e-41  Click
18 2243185..2243200  attR    AACGGGAGCCTGATGG  N/A  Click
Region 4, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2464528..2465814)  PHAGE_Escher_P13374: phage integrase; Spro_2264; phage(gi410491596)  2e-121  Click
2 complement(2465829..2466107)  PHAGE_Escher_P13374: excisionase; Spro_2265; phage(gi410491597)  7e-13  Click
3 2467811..2468089  PROPHAGE_Xantho_33913: ISxac3 transposase; Spro_2266; phage(gi21231087)  2e-24  Click
4 2468110..2468961  PROPHAGE_Escher_CFT073: transposase insF; Spro_2267; phage(gi26250329)  4e-97  Click
5 complement(2469231..2470421)  PHAGE_Acidia_virus: hypothetical protein ATV_gp34; Spro_2268; phage(gi75750403)  3e-13  Click
6 complement(2470649..2471356)  PHAGE_Synech_S_CRM01: hypothetical protein; Spro_2269; phage(gi333798320)  2e-20  Click
7 complement(2471623..2471847)  PTS system maltose and glucose-specific transporter subunit IIABC; Spro_2270  N/A  Click
8 2472046..2473104  DNA-binding transcriptional repressor MalI; Spro_2271  N/A  Click
9 complement(2473107..2473994)  PHAGE_Burkho_phi1026b: gp58; Spro_2272; phage(gi38707948)  4e-21  Click
10 2474186..2475322  PHAGE_Mycoba_Wildcat: gp44; Spro_2273; phage(gi109521481)  2e-07  Click
11 complement(2475334..2476263)  PHAGE_Burkho_phi1026b: gp58; Spro_2274; phage(gi38707948)  6e-14  Click
12 2476366..2477517  PHAGE_Mycoba_Wildcat: gp44; Spro_2275; phage(gi109521481)  3e-13  Click
Region 5, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4518035..4518049  attL    CGCTGGCGGCAGACA  N/A  Click
2 complement(4521585..4532393)  PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Spro_4077; phage(gi414087138)  2e-11  Click
3 complement(4532462..4534207)  polypeptide-transport-associated domain-containing protein; Spro_4078  N/A  Click
4 4534439..4534702  PROPHAGE_Xantho_33913: IS1404 transposase; Spro_4079; phage(gi21232568)  2e-25  Click
5 4534735..4534959  PROPHAGE_Xantho_33913: IS1477 transposase; Spro_4080; phage(gi77747809)  4e-14  Click
6 4534928..4535560  PROPHAGE_Xantho_33913: IS1477 transposase; Spro_4081; phage(gi77747809)  1e-57  Click
7 4535688..4538279  PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; Spro_4082; phage(gi423261981)  1e-17  Click
8 4538281..4539510  PHAGE_Cafete_BV_PW1: putative DNA N6-adenine methyltransferase; Spro_4083; phage(gi310831004)  6e-10  Click
9 4546995..4547009  attR    CGCTGGCGGCAGACA  N/A  Click