Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 6 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 398922..398935 | attL TATGTATCGTCTGG | N/A | Click |
2 | 406249..406821 | PHAGE_Pseudo_Pf1: hypothetical protein Pf1p05; Spro_0354; phage(gi9625371) | 5e-06 | Click |
3 | complement(406808..407482) | PROPHAGE_Xantho_33913: Tn5041 transposase; Spro_0355; phage(gi21231545) | 3e-20 | Click |
4 | 407515..408558 | PROPHAGE_Escher_CFT073: transposase; Spro_0356; phage(gi26248360) | 5e-71 | Click |
5 | 408555..409343 | PROPHAGE_Escher_CFT073: transposase/IS protein; Spro_0357; phage(gi26248359) | 6e-76 | Click |
6 | complement(409383..410204) | PROPHAGE_Xantho_33913: Tn5041 transposase; Spro_0358; phage(gi21231545) | 6e-07 | Click |
7 | complement(411176..411460) | PROPHAGE_Xantho_33913: ISxac3 transposase; Spro_0361; phage(gi21231087) | 2e-21 | Click |
8 | 425399..425412 | attR TATGTATCGTCTGG | N/A | Click |
Region 2, total : 22 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(952334..952552) | PHAGE_Yersin_413C: Ogr; Spro_0856; phage(gi30065732) | 9e-22 | Click |
2 | complement(952641..953732) | PHAGE_Yersin_413C: gpD; Spro_0857; phage(gi30065731) | 1e-98 | Click |
3 | complement(953729..954202) | PHAGE_Yersin_413C: gpU; Spro_0858; phage(gi30065730) | 8e-48 | Click |
4 | complement(954219..956324) | PHAGE_Erwini_ENT90: phage tail measure protein; Spro_0859; phage(gi431810935) | 9e-26 | Click |
5 | complement(956317..956451) | PHAGE_Yersin_413C: gpE+E'; Spro_0860; phage(gi30065728) | 1e-11 | Click |
6 | complement(956472..956759) | PHAGE_Yersin_413C: gpE; Spro_0861; phage(gi30065727) | 1e-26 | Click |
7 | complement(956824..957333) | PHAGE_Yersin_413C: FII; Spro_0862; phage(gi30065726) | 1e-59 | Click |
8 | complement(957347..958516) | PHAGE_Yersin_413C: gpFI; Spro_0863; phage(gi30065725) | 2e-171 | Click |
9 | complement(958660..959214) | PHAGE_Yersin_413C: gpG; Spro_0864; phage(gi30065723) | 1e-29 | Click |
10 | complement(959216..960880) | PHAGE_Yersin_413C: gpH; Spro_0865; phage(gi30065722) | 7e-53 | Click |
11 | complement(960877..964170) | PHAGE_Salmon_7_11: hypothetical protein; Spro_0866; phage(gi345461121) | 0.0 | Click |
12 | complement(964163..965071) | PHAGE_Yersin_413C: gpJ; Spro_0867; phage(gi30065720) | 2e-120 | Click |
13 | complement(965076..965426) | PHAGE_Yersin_413C: gpW; Spro_0868; phage(gi30065719) | 4e-33 | Click |
14 | complement(965423..966058) | PHAGE_Yersin_413C: gpV; Spro_0869; phage(gi30065718) | 7e-68 | Click |
15 | complement(966147..966611) | PHAGE_Yersin_413C: gpR; Spro_0870; phage(gi30065716) | 8e-34 | Click |
16 | complement(966651..967163) | PHAGE_Salmon_RE_2010: lysozyme; Spro_0871; phage(gi418489704) | 1e-53 | Click |
17 | complement(967147..967365) | PHAGE_Erwini_ENT90: hypothetical protein; Spro_0872; phage(gi431810988) | 3e-10 | Click |
18 | complement(967369..967572) | PHAGE_Yersin_413C: gpX; Spro_0873; phage(gi30065711) | 4e-16 | Click |
19 | complement(968036..970099) | PHAGE_Yersin_413C: gpA; Spro_0874; phage(gi30065742) | 0.0 | Click |
20 | complement(970104..970325) | PHAGE_Yersin_413C: hypothetical protein L-413Cp36; Spro_0875; phage(gi30065740) | 9e-13 | Click |
21 | complement(970400..970705) | gpB bacteriophage P2-like protein; Spro_0876 | N/A | Click |
22 | 970971..971837 | PHAGE_Entero_PsP3: CI; Spro_0877; phage(gi41057393) | 1e-82 | Click |
Region 3, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2219758..2219773 | attL AACGGGAGCCTGATGG | N/A | Click |
2 | 2224410..2225261 | PROPHAGE_Escher_CFT073: transposase insF; Spro_2030; phage(gi26250329) | 4e-97 | Click |
3 | complement(2225496..2226161) | hypothetical protein; Spro_2031 | N/A | Click |
4 | complement(2226145..2226987) | PHAGE_Entero_mEp390: hypothetical protein; Spro_2032; phage(gi428782698) | 1e-74 | Click |
5 | complement(2229342..2230190) | hypothetical protein; Spro_2033 | N/A | Click |
6 | complement(2230635..2231279) | PHAGE_Entero_mEp460: prophage repressor; Spro_2034; phage(gi428782354) | 5e-42 | Click |
7 | 2231371..2231598 | PHAGE_Entero_c_1: prophage antirepressor; Spro_2035; phage(gi428781783) | 5e-11 | Click |
8 | 2231614..2231901 | PHAGE_Bacill_B103: morphogenesis protein; Spro_2036; phage(gi22855163) | 9e-11 | Click |
9 | 2231898..2232281 | hypothetical protein; Spro_2037 | N/A | Click |
10 | 2232949..2233230 | hypothetical protein; Spro_2038 | N/A | Click |
11 | 2233913..2234320 | hypothetical protein; Spro_2039 | N/A | Click |
12 | 2234415..2234675 | PHAGE_Pectob_ZF40: putative DNA polymerase; Spro_2040; phage(gi422936677) | 2e-25 | Click |
13 | 2235519..2236073 | PHAGE_Entero_HK630: terminase small subunit nu1; Spro_2041; phage(gi428782788) | 8e-70 | Click |
14 | 2236048..2237973 | PHAGE_Entero_HK630: terminase large subunit A; Spro_2042; phage(gi428782789) | 0.0 | Click |
15 | 2238059..2238805 | PROPHAGE_Xylell_Temecula1: contractile tail sheath protein; Spro_2043; phage(gi28198986) | 2e-15 | Click |
16 | 2238805..2239263 | PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; Spro_2044; phage(gi428782751) | 2e-20 | Click |
17 | 2239457..2240578 | PROPHAGE_Xylell_Temecula1: phage-related tail protein; Spro_2045; phage(gi28198980) | 8e-41 | Click |
18 | 2243185..2243200 | attR AACGGGAGCCTGATGG | N/A | Click |
Region 4, total : 12 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2464528..2465814) | PHAGE_Escher_P13374: phage integrase; Spro_2264; phage(gi410491596) | 2e-121 | Click |
2 | complement(2465829..2466107) | PHAGE_Escher_P13374: excisionase; Spro_2265; phage(gi410491597) | 7e-13 | Click |
3 | 2467811..2468089 | PROPHAGE_Xantho_33913: ISxac3 transposase; Spro_2266; phage(gi21231087) | 2e-24 | Click |
4 | 2468110..2468961 | PROPHAGE_Escher_CFT073: transposase insF; Spro_2267; phage(gi26250329) | 4e-97 | Click |
5 | complement(2469231..2470421) | PHAGE_Acidia_virus: hypothetical protein ATV_gp34; Spro_2268; phage(gi75750403) | 3e-13 | Click |
6 | complement(2470649..2471356) | PHAGE_Synech_S_CRM01: hypothetical protein; Spro_2269; phage(gi333798320) | 2e-20 | Click |
7 | complement(2471623..2471847) | PTS system maltose and glucose-specific transporter subunit IIABC; Spro_2270 | N/A | Click |
8 | 2472046..2473104 | DNA-binding transcriptional repressor MalI; Spro_2271 | N/A | Click |
9 | complement(2473107..2473994) | PHAGE_Burkho_phi1026b: gp58; Spro_2272; phage(gi38707948) | 4e-21 | Click |
10 | 2474186..2475322 | PHAGE_Mycoba_Wildcat: gp44; Spro_2273; phage(gi109521481) | 2e-07 | Click |
11 | complement(2475334..2476263) | PHAGE_Burkho_phi1026b: gp58; Spro_2274; phage(gi38707948) | 6e-14 | Click |
12 | 2476366..2477517 | PHAGE_Mycoba_Wildcat: gp44; Spro_2275; phage(gi109521481) | 3e-13 | Click |
Region 5, total : 7 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4518035..4518049 | attL CGCTGGCGGCAGACA | N/A | Click |
2 | complement(4521585..4532393) | PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Spro_4077; phage(gi414087138) | 2e-11 | Click |
3 | complement(4532462..4534207) | polypeptide-transport-associated domain-containing protein; Spro_4078 | N/A | Click |
4 | 4534439..4534702 | PROPHAGE_Xantho_33913: IS1404 transposase; Spro_4079; phage(gi21232568) | 2e-25 | Click |
5 | 4534735..4534959 | PROPHAGE_Xantho_33913: IS1477 transposase; Spro_4080; phage(gi77747809) | 4e-14 | Click |
6 | 4534928..4535560 | PROPHAGE_Xantho_33913: IS1477 transposase; Spro_4081; phage(gi77747809) | 1e-57 | Click |
7 | 4535688..4538279 | PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; Spro_4082; phage(gi423261981) | 1e-17 | Click |
8 | 4538281..4539510 | PHAGE_Cafete_BV_PW1: putative DNA N6-adenine methyltransferase; Spro_4083; phage(gi310831004) | 6e-10 | Click |
9 | 4546995..4547009 | attR CGCTGGCGGCAGACA | N/A | Click |