| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 67 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 258916..258930 | attL CGCCATTTTGTCGCC | N/A | Click |
| 2 | complement(258932..259969) | PHAGE_Vibrio_kappa: putative integrase; VIBHAR_05002; phage(gi165970235) | 8e-128 | Click |
| 3 | 260101..260391 | hypothetical protein; VIBHAR_05003 | N/A | Click |
| 4 | complement(260427..260552) | hypothetical protein; VIBHAR_05004 | N/A | Click |
| 5 | 260786..261775 | hypothetical protein; VIBHAR_05005 | N/A | Click |
| 6 | 261765..262256 | hypothetical protein; VIBHAR_05006 | N/A | Click |
| 7 | 262257..264140 | PHAGE_Bacill_SP10: SbcC type exonuclease; VIBHAR_05007; phage(gi418489611) | 4e-07 | Click |
| 8 | complement(264366..266342) | hypothetical protein; VIBHAR_05008 | N/A | Click |
| 9 | complement(266342..266968) | PHAGE_Vibrio_kappa: putative repressor; VIBHAR_05009; phage(gi165970238) | 1e-35 | Click |
| 10 | 267065..267277 | PHAGE_Vibrio_kappa: putative regulator; VIBHAR_05010; phage(gi165970239) | 2e-15 | Click |
| 11 | 267274..267381 | hypothetical protein; VIBHAR_05011 | N/A | Click |
| 12 | 267391..267930 | PHAGE_Vibrio_kappa: putative regulator; VIBHAR_05012; phage(gi165970240) | 2e-34 | Click |
| 13 | 267959..268159 | hypothetical protein; VIBHAR_05013 | N/A | Click |
| 14 | 268159..268386 | PHAGE_Vibrio_kappa: hypothetical protein KP11; VIBHAR_05014; phage(gi165970245) | 3e-16 | Click |
| 15 | 268383..268619 | hypothetical protein; VIBHAR_05015 | N/A | Click |
| 16 | 268625..270511 | PHAGE_Entero_PsP3: gp36; VIBHAR_05016; phage(gi41057388) | 7e-65 | Click |
| 17 | 270562..270825 | PHAGE_Vibrio_kappa: hypothetical protein KP18; VIBHAR_05017; phage(gi165970252) | 2e-11 | Click |
| 18 | complement(270820..271071) | PHAGE_Vibrio_kappa: hypothetical zinc-finger protein; VIBHAR_05018; phage(gi165970253) | 7e-32 | Click |
| 19 | complement(271171..271602) | hypothetical protein; VIBHAR_05019 | N/A | Click |
| 20 | complement(272076..272408) | hypothetical protein; VIBHAR_05020 | N/A | Click |
| 21 | 272864..272968 | hypothetical protein; VIBHAR_05021 | N/A | Click |
| 22 | complement(272930..273277) | hypothetical protein; VIBHAR_05022 | N/A | Click |
| 23 | complement(273599..273703) | hypothetical protein; VIBHAR_05023 | N/A | Click |
| 24 | complement(274155..275162) | PHAGE_Vibrio_kappa: hypothetical pbsx family phage portal protein; VIBHAR_05024; phage(gi165970255) | 2e-107 | Click |
| 25 | complement(275167..276948) | PHAGE_Vibrio_kappa: putative terminase ATPase subunit; VIBHAR_05025; phage(gi165970256) | 0.0 | Click |
| 26 | 277123..277998 | PHAGE_Vibrio_kappa: putative capsid scaffolding protein; VIBHAR_05026; phage(gi165970257) | 2e-63 | Click |
| 27 | 277999..279009 | PHAGE_Vibrio_kappa: putative major capsid protein; VIBHAR_05027; phage(gi165970258) | 8e-72 | Click |
| 28 | 279013..279729 | PHAGE_Vibrio_kappa: putative terminase endonuclease subunit; VIBHAR_05028; phage(gi165970259) | 2e-60 | Click |
| 29 | 279845..280267 | PHAGE_Vibrio_kappa: putative head completion protein; VIBHAR_05029; phage(gi165970260) | 3e-09 | Click |
| 30 | 280264..280755 | PHAGE_Vibrio_kappa: hypothetical protein KP27; VIBHAR_05030; phage(gi165970261) | 8e-17 | Click |
| 31 | 280739..281395 | PHAGE_Vibrio_kappa: putative tail completion protein; VIBHAR_05031; phage(gi165970262) | 3e-08 | Click |
| 32 | 281411..282532 | PHAGE_Vibrio_kappa: putative tail sheath protein; VIBHAR_05032; phage(gi165970264) | 1e-66 | Click |
| 33 | 282536..282991 | PHAGE_Vibrio_kappa: putative tail tube protein; VIBHAR_05033; phage(gi165970265) | 8e-26 | Click |
| 34 | 283004..283222 | PHAGE_Vibrio_kappa: putative C4-type zinc-finger protein; VIBHAR_05034; phage(gi165970266) | 3e-12 | Click |
| 35 | 283219..283731 | PHAGE_Klebsi_phiKO2: Gp54; VIBHAR_05035; phage(gi46402140) | 1e-07 | Click |
| 36 | 283728..283958 | hypothetical protein; VIBHAR_05036 | N/A | Click |
| 37 | 283961..284197 | PHAGE_Vibrio_VP882: putative phage-related protein; VIBHAR_05037; phage(gi126010910) | 2e-06 | Click |
| 38 | 284194..284457 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; VIBHAR_05038; phage(gi148727164) | 2e-12 | Click |
| 39 | 284499..284642 | PHAGE_Pasteu_F108: hypothetical protein F108p32; VIBHAR_05039; phage(gi109302928) | 1e-06 | Click |
| 40 | 284668..287223 | PHAGE_Vibrio_kappa: putative tail length determinator; VIBHAR_05040; phage(gi165970271) | 6e-131 | Click |
| 41 | 287223..287555 | PHAGE_Vibrio_kappa: hypothetical protein KP38; VIBHAR_05041; phage(gi165970272) | 1e-14 | Click |
| 42 | 287548..288735 | PHAGE_Vibrio_kappa: hypothetical protein KP39; VIBHAR_05042; phage(gi165970273) | 5e-76 | Click |
| 43 | 288755..289255 | PHAGE_Vibrio_kappa: hypothetical protein KP40; VIBHAR_05043; phage(gi165970274) | 1e-24 | Click |
| 44 | 289259..290065 | PHAGE_Vibrio_kappa: putative tail fiber protein; VIBHAR_05044; phage(gi165970275) | 9e-14 | Click |
| 45 | 290058..290813 | PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; VIBHAR_05045; phage(gi428782744) | 7e-05 | Click |
| 46 | 290816..291046 | hypothetical protein; VIBHAR_05046 | N/A | Click |
| 47 | 291056..291592 | PHAGE_Vibrio_kappa: hypothetical protein KP44; VIBHAR_05047; phage(gi165970278) | 3e-20 | Click |
| 48 | 291606..292295 | PHAGE_Vibrio_kappa: hypothetical protein KP45; VIBHAR_05048; phage(gi165970279) | 5e-31 | Click |
| 49 | 292286..292984 | PHAGE_Vibrio_kappa: hypothetical protein KP45; VIBHAR_05049; phage(gi165970279) | 2e-22 | Click |
| 50 | 292984..293181 | PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; VIBHAR_05050; phage(gi428782736) | 1e-10 | Click |
| 51 | 293457..293792 | hypothetical protein; VIBHAR_05051 | N/A | Click |
| 52 | complement(293811..293939) | hypothetical protein; VIBHAR_05052 | N/A | Click |
| 53 | complement(294141..295157) | PROPHAGE_Shewan_MR-1: IS110 family transposase; VIBHAR_05053; phage(gi24375433) | 9e-62 | Click |
| 54 | complement(295268..296467) | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_05054; phage(gi24375070) | 9e-97 | Click |
| 55 | 296623..297117 | acetyltransferase; VIBHAR_05055 | N/A | Click |
| 56 | 297179..297292 | hypothetical protein; VIBHAR_05056 | N/A | Click |
| 57 | 297351..297506 | hypothetical protein; VIBHAR_05057 | N/A | Click |
| 58 | complement(297575..297943) | PROPHAGE_Escher_CFT073: transposase; VIBHAR_05058; phage(gi26248352) | 1e-05 | Click |
| 59 | complement(298015..298194) | hypothetical protein; VIBHAR_05059 | N/A | Click |
| 60 | complement(298237..298416) | hypothetical protein; VIBHAR_05060 | N/A | Click |
| 61 | 298446..298460 | attR CGCCATTTTGTCGCC | N/A | Click |
| 62 | 298524..298658 | hypothetical protein; VIBHAR_05061 | N/A | Click |
| 63 | complement(298938..299168) | hypothetical protein; VIBHAR_05063 | N/A | Click |
| 64 | 299167..299496 | PHAGE_Pseudo_OBP: hypothetical protein; VIBHAR_05062; phage(gi371671514) | 1e-09 | Click |
| 65 | 299523..299999 | PHAGE_Pseudo_OBP: hypothetical protein; VIBHAR_05064; phage(gi371671514) | 2e-13 | Click |
| 66 | 300030..300926 | PROPHAGE_Shewan_MR-1: ISSod10, transposase OrfA; VIBHAR_05065; phage(gi24371809) | 4e-05 | Click |
| 67 | 300963..301289 | hypothetical protein; VIBHAR_05066 | N/A | Click |
| 68 | 301286..301639 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf1; VIBHAR_05067; phage(gi26990788) | 4e-21 | Click |
| 69 | 301699..303231 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; VIBHAR_05068; phage(gi26990787) | 7e-104 | Click |
Region 2, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 826444..827145 | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; VIBHAR_05621; phage(gi24373866) | 1e-27 | Click |
| 2 | complement(827201..827356) | hypothetical protein; VIBHAR_05622 | N/A | Click |
| 3 | complement(827899..828885) | PHAGE_Clostr_phiCPV4: putative lysozyme-peptidase; VIBHAR_05623; phage(gi392972673) | 6e-16 | Click |
| 4 | 829138..838578 | PHAGE_Equid__9: envelope glycoprotein J; VIBHAR_05624; phage(gi216905924) | 3e-14 | Click |
| 5 | complement(838633..838743) | hypothetical protein; VIBHAR_05625 | N/A | Click |
| 6 | complement(838784..840352) | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; VIBHAR_05626; phage(gi26990787) | 8e-103 | Click |
| 7 | complement(840389..840742) | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf1; VIBHAR_05627; phage(gi26990788) | 1e-21 | Click |
| 8 | complement(840739..841050) | hypothetical protein; VIBHAR_05629 | N/A | Click |
| 9 | 841036..842406 | PROPHAGE_Escher_MG1655: IS4 transposase; VIBHAR_05628; phage(gi16132099) | 7e-119 | Click |
Region 3, total : 33 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 946751..946763 | attL CTTAACTGATCGG | N/A | Click |
| 2 | complement(950213..950914) | PHAGE_Entero_Sf6: putative transposase OrfB; VIBHAR_05750; phage(gi41057343) | 9e-28 | Click |
| 3 | complement(951055..951336) | hypothetical protein; VIBHAR_05751 | N/A | Click |
| 4 | complement(951374..951505) | hypothetical protein; VIBHAR_05753 | N/A | Click |
| 5 | 951401..951553 | hypothetical protein; VIBHAR_05752 | N/A | Click |
| 6 | 951716..952153 | hypothetical protein; VIBHAR_05754 | N/A | Click |
| 7 | 952177..953187 | PHAGE_Lactob_phiAT3: putative transposase B; VIBHAR_05755; phage(gi48697274) | 2e-14 | Click |
| 8 | 953303..953545 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf1; VIBHAR_05756; phage(gi26990788) | 1e-12 | Click |
| 9 | 953605..955170 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; VIBHAR_05757; phage(gi26990787) | 1e-102 | Click |
| 10 | complement(955203..955370) | hypothetical protein; VIBHAR_05758 | N/A | Click |
| 11 | 955703..956068 | PHAGE_Vibrio_VfO3K6: Vpf121; VIBHAR_05759; phage(gi9635475) | 2e-58 | Click |
| 12 | complement(956144..956530) | hypothetical protein; VIBHAR_05761 | N/A | Click |
| 13 | 956266..956373 | hypothetical protein; VIBHAR_05760 | N/A | Click |
| 14 | 956693..957058 | PHAGE_Vibrio_VfO3K6: Vpf121; VIBHAR_05762; phage(gi9635475) | 4e-59 | Click |
| 15 | complement(957092..957802) | hypothetical protein; VIBHAR_05763 | N/A | Click |
| 16 | complement(957927..958589) | hypothetical protein; VIBHAR_05764 | N/A | Click |
| 17 | complement(958728..959222) | hypothetical protein; VIBHAR_05766 | N/A | Click |
| 18 | 958843..958986 | hypothetical protein; VIBHAR_05765 | N/A | Click |
| 19 | complement(959394..960488) | hypothetical protein; VIBHAR_05767 | N/A | Click |
| 20 | complement(960586..960909) | hypothetical protein; VIBHAR_05768 | N/A | Click |
| 21 | complement(961511..961672) | hypothetical protein; VIBHAR_05769 | N/A | Click |
| 22 | complement(961672..962940) | PHAGE_Vibrio_VfO3K6: Vpf461; VIBHAR_05770; phage(gi9635473) | 0.0 | Click |
| 23 | complement(963062..963427) | PHAGE_Vibrio_VfO3K6: Vpf114; VIBHAR_05771; phage(gi9635472) | 8e-46 | Click |
| 24 | complement(963408..964505) | PHAGE_Vibrio_VfO3K6: Vpf504; VIBHAR_05772; phage(gi9635471) | 5e-144 | Click |
| 25 | 964508..964657 | hypothetical protein; VIBHAR_05773 | N/A | Click |
| 26 | 964921..965034 | hypothetical protein; VIBHAR_05774 | N/A | Click |
| 27 | complement(965031..965279) | PHAGE_Vibrio_VfO3K6: Vpf81; VIBHAR_05775; phage(gi9635470) | 1e-32 | Click |
| 28 | complement(965285..965515) | PHAGE_Vibrio_VfO3K6: Vpf76; VIBHAR_05776; phage(gi9635469) | 1e-32 | Click |
| 29 | complement(965521..965880) | PHAGE_Vibrio_VfO3K6: Vpf119; VIBHAR_05777; phage(gi9635468) | 3e-61 | Click |
| 30 | complement(965884..967029) | PHAGE_Vibrio_VfO3K6: Vpf402; VIBHAR_05778; phage(gi9635477) | 0.0 | Click |
| 31 | complement(967013..967228) | hypothetical protein; VIBHAR_05779 | N/A | Click |
| 32 | complement(967232..967633) | hypothetical protein; VIBHAR_05780 | N/A | Click |
| 33 | complement(967617..967955) | PHAGE_Vibrio_kappa: hypothetical protein KP14; VIBHAR_05781; phage(gi165970248) | 1e-06 | Click |
| 34 | 968086..968454 | PHAGE_Vibrio_VfO3K6: Vpf148; VIBHAR_05782; phage(gi9635476) | 5e-36 | Click |
| 35 | 978996..979008 | attR CTTAACTGATCGG | N/A | Click |
Region 4, total : 13 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(961672..962940) | PHAGE_Vibrio_VfO4K68: Vpf461; VIBHAR_05770; phage(gi9635484) | 0.0 | Click |
| 2 | complement(963062..963427) | PHAGE_Vibrio_VfO4K68: Vpf114; VIBHAR_05771; phage(gi9635483) | 8e-46 | Click |
| 3 | complement(963408..964505) | PHAGE_Vibrio_VfO4K68: Vpf504; VIBHAR_05772; phage(gi9635482) | 5e-144 | Click |
| 4 | 964508..964657 | hypothetical protein; VIBHAR_05773 | N/A | Click |
| 5 | 964921..965034 | hypothetical protein; VIBHAR_05774 | N/A | Click |
| 6 | complement(965031..965279) | PHAGE_Vibrio_VfO4K68: Vpf81; VIBHAR_05775; phage(gi9635481) | 1e-32 | Click |
| 7 | complement(965285..965515) | PHAGE_Vibrio_VfO4K68: Vpf76; VIBHAR_05776; phage(gi9635480) | 1e-32 | Click |
| 8 | complement(965521..965880) | PHAGE_Vibrio_VfO4K68: Vpf119; VIBHAR_05777; phage(gi9635479) | 3e-61 | Click |
| 9 | complement(965884..967029) | PHAGE_Vibrio_VfO4K68: Vpf402; VIBHAR_05778; phage(gi9635486) | 0.0 | Click |
| 10 | complement(967013..967228) | hypothetical protein; VIBHAR_05779 | N/A | Click |
| 11 | complement(967232..967633) | hypothetical protein; VIBHAR_05780 | N/A | Click |
| 12 | complement(967617..967955) | PHAGE_Vibrio_kappa: hypothetical protein KP14; VIBHAR_05781; phage(gi165970248) | 1e-06 | Click |
| 13 | 968086..968454 | PHAGE_Vibrio_VfO3K6: Vpf148; VIBHAR_05782; phage(gi9635476) | 5e-36 | Click |
Region 5, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1091317..1093506) | PHAGE_Achole_L2: envelope protein; VIBHAR_05899; phage(gi9626524) | 3e-07 | Click |
| 2 | 1094163..1094333 | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_05900; phage(gi9634149) | 6e-10 | Click |
| 3 | 1094614..1095012 | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_05901; phage(gi9634149) | 3e-35 | Click |
| 4 | complement(1095362..1096555) | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_05902; phage(gi24375070) | 2e-69 | Click |
| 5 | complement(1096651..1096914) | hypothetical protein; VIBHAR_05903 | N/A | Click |
| 6 | complement(1096952..1097377) | PROPHAGE_Escher_MG1655: predicted transposase; VIBHAR_05904; phage(gi16131356) | 8e-11 | Click |
| 7 | complement(1097578..1097694) | hypothetical protein; VIBHAR_05905 | N/A | Click |
| 8 | complement(1098050..1099546) | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; VIBHAR_05906; phage(gi26990787) | 6e-101 | Click |
| 9 | complement(1099606..1099959) | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf1; VIBHAR_05907; phage(gi26990788) | 1e-21 | Click |
| 10 | complement(1099956..1100282) | hypothetical protein; VIBHAR_05909 | N/A | Click |
| 11 | 1100235..1100396 | hypothetical protein; VIBHAR_05908 | N/A | Click |
| 12 | complement(1100400..1101761) | PROPHAGE_Shewan_MR-1: ISSod7, transposase; VIBHAR_05910; phage(gi24375048) | 2e-70 | Click |
| 13 | complement(1101844..1102035) | hypothetical protein; VIBHAR_05911 | N/A | Click |
| 14 | complement(1102314..1103345) | PHAGE_Escher_phAPEC8: integral membrane protein TerC; VIBHAR_05912; phage(gi448260482) | 1e-43 | Click |
Region 6, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1166697..1169249) | PHAGE_Entero_ime09: phage capsid and scaffold protein; VIBHAR_05976; phage(gi422934595) | 2e-05 | Click |
| 2 | complement(1169249..1169464) | hypothetical protein; VIBHAR_05977 | N/A | Click |
| 3 | complement(1169461..1170546) | hypothetical protein; VIBHAR_05979 | N/A | Click |
| 4 | 1170545..1170673 | hypothetical protein; VIBHAR_05978 | N/A | Click |
| 5 | 1170818..1170922 | hypothetical protein; VIBHAR_05980 | N/A | Click |
| 6 | complement(1170963..1171625) | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_05981; phage(gi9634149) | 2e-71 | Click |
| 7 | complement(1171622..1172821) | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_05982; phage(gi24375070) | 9e-97 | Click |
| 8 | complement(1172924..1173226) | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_05983; phage(gi9634149) | 2e-31 | Click |
| 9 | complement(1173291..1173404) | hypothetical protein; VIBHAR_05984 | N/A | Click |
| 10 | complement(1173464..1173994) | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_05985; phage(gi9634149) | 3e-38 | Click |
| 11 | 1174133..1174519 | PROPHAGE_Brucel_1330: ISBm1, transposase orfA; VIBHAR_05986; phage(gi23501424) | 1e-07 | Click |
| 12 | 1174528..1174929 | PROPHAGE_Xantho_33913: IS1480 transposase; VIBHAR_05987; phage(gi21231089) | 5e-06 | Click |
| 13 | 1175245..1175520 | PHAGE_Entero_P1: InsA; VIBHAR_05988; phage(gi46401643) | 2e-17 | Click |
| 14 | 1175615..1176523 | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_05989; phage(gi9634149) | 1e-100 | Click |