| Definition | Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome. |
|---|---|
| Accession | NC_009783 |
| Length | 3,765,351 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 15 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 501636..501649 | attL ATAAATCGAGTCTC | N/A | Click |
| 2 | 515648..516997 | PROPHAGE_Xantho_306: integrase/recombinase; VIBHAR_00537; phage(gi21244651) | 7e-16 | Click |
| 3 | 516987..518735 | hypothetical protein; VIBHAR_00538 | N/A | Click |
| 4 | 518735..520162 | hypothetical protein; VIBHAR_00539 | N/A | Click |
| 5 | 520499..521293 | PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; VIBHAR_00540; phage(gi26989833) | 4e-61 | Click |
| 6 | 521576..521836 | PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; VIBHAR_00541; phage(gi399528790) | 1e-10 | Click |
| 7 | complement(521868..522125) | hypothetical protein; VIBHAR_00542 | N/A | Click |
| 8 | complement(522122..524701) | hypothetical protein; VIBHAR_00543 | N/A | Click |
| 9 | 525289..526152 | hypothetical protein; VIBHAR_00544 | N/A | Click |
| 10 | complement(526466..526588) | hypothetical protein; VIBHAR_00545 | N/A | Click |
| 11 | complement(526622..527251) | PROPHAGE_Shewan_MR-1: IS110 family transposase; VIBHAR_00546; phage(gi24375433) | 2e-06 | Click |
| 12 | complement(527256..528449) | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_00547; phage(gi24375070) | 4e-70 | Click |
| 13 | complement(529055..531244) | PHAGE_Achole_L2: envelope protein; VIBHAR_00548; phage(gi9626524) | 3e-07 | Click |
| 14 | 531901..532071 | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_00549; phage(gi9634149) | 6e-10 | Click |
| 15 | 532352..532750 | PHAGE_Entero_HK022: IS903 transposase; VIBHAR_00550; phage(gi9634149) | 3e-35 | Click |
| 16 | complement(533100..534293) | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_00551; phage(gi24375070) | 4e-70 | Click |
| 17 | 543295..543308 | attR ATAAATCGAGTCTC | N/A | Click |
Region 2, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1159171..1159665 | PHAGE_Bacill_SP10: competence protein; VIBHAR_01142; phage(gi418489534) | 8e-06 | Click |
| 2 | complement(1159746..1159919) | hypothetical protein; VIBHAR_01143 | N/A | Click |
| 3 | 1159961..1160287 | hypothetical protein; VIBHAR_01144 | N/A | Click |
| 4 | 1160284..1160637 | PHAGE_Stx2_c_1717: transposase; VIBHAR_01145; phage(gi209447152) | 5e-09 | Click |
| 5 | 1160674..1161258 | PHAGE_Stx2_c_1717: transposase; VIBHAR_01146; phage(gi209447153) | 2e-09 | Click |
| 6 | 1161354..1162547 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_01147; phage(gi24375070) | 4e-70 | Click |
| 7 | 1162554..1163582 | PHAGE_Stx2_c_1717: transposase; VIBHAR_01148; phage(gi209447153) | 2e-48 | Click |
| 8 | complement(1163893..1165497) | PHAGE_Yersin_12: internal virion protein D; VIBHAR_01149; phage(gi9634042) | 1e-07 | Click |
| 9 | 1165821..1169717 | PHAGE_Human__8: ORF75; VIBHAR_01150; phage(gi139472887) | 3e-32 | Click |
Region 3, total : 20 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1951728..1951739 | attL TAGATTAGATTA | N/A | Click |
| 2 | complement(1951922..1952623) | PHAGE_Entero_Sf6: putative transposase OrfB; VIBHAR_01946; phage(gi41057343) | 9e-28 | Click |
| 3 | complement(1952764..1953045) | hypothetical protein; VIBHAR_01947 | N/A | Click |
| 4 | complement(1953256..1954491) | PHAGE_Salmon_1: putative bacteriophage integrase; VIBHAR_01948; phage(gi169257156) | 8e-79 | Click |
| 5 | complement(1954491..1954721) | hypothetical protein; VIBHAR_01949 | N/A | Click |
| 6 | complement(1954909..1955121) | hypothetical protein; VIBHAR_01950 | N/A | Click |
| 7 | complement(1955174..1955992) | PHAGE_Entero_SfV: hypothetical protein SfVp31; VIBHAR_01951; phage(gi19549018) | 1e-55 | Click |
| 8 | complement(1956033..1956428) | PHAGE_Entero_SfV: hypothetical protein SfVp32; VIBHAR_01952; phage(gi19549019) | 3e-07 | Click |
| 9 | complement(1956588..1956713) | hypothetical protein; VIBHAR_01953 | N/A | Click |
| 10 | complement(1956744..1957409) | PHAGE_Entero_ST64T: C2; VIBHAR_01954; phage(gi24371557) | 2e-73 | Click |
| 11 | 1957519..1957785 | PHAGE_Entero_ST64T: Cro; VIBHAR_01955; phage(gi24371558) | 2e-11 | Click |
| 12 | 1957775..1958227 | PHAGE_Entero_SfV: hypothetical protein SfVp36; VIBHAR_01956; phage(gi19549023) | 1e-04 | Click |
| 13 | 1958224..1958493 | hypothetical protein; VIBHAR_01957 | N/A | Click |
| 14 | 1958493..1958657 | hypothetical protein; VIBHAR_01958 | N/A | Click |
| 15 | 1958650..1959171 | PHAGE_Pectob_phiTE: hypothetical protein; VIBHAR_01959; phage(gi448244882) | 2e-30 | Click |
| 16 | 1959171..1960127 | PHAGE_Entero_phiP27: hypothetical protein P27p17; VIBHAR_01960; phage(gi18249881) | 2e-11 | Click |
| 17 | 1960371..1961039 | PHAGE_Entero_HK633: DNA-binding protein; VIBHAR_01961; phage(gi428782577) | 1e-38 | Click |
| 18 | 1961036..1961347 | PHAGE_Acinet_Bphi_B1251: hypothetical protein; VIBHAR_01962; phage(gi423261993) | 6e-23 | Click |
| 19 | 1961340..1962311 | PHAGE_Entero_SfV: hypothetical protein SfVp45; VIBHAR_01963; phage(gi19549032) | 1e-41 | Click |
| 20 | 1962725..1963501 | hypothetical protein; VIBHAR_01964 | N/A | Click |
| 21 | 1964312..1966627 | PHAGE_Aeromo_CC2: baseplate hub subunit; VIBHAR_01965; phage(gi423261829) | 4e-06 | Click |
| 22 | 1969003..1969014 | attR TAGATTAGATTA | N/A | Click |
Region 4, total : 44 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1971036..1971063 | attL AAGTGCCCCATTCCTTCTCAGCGCGAAA | N/A | Click |
| 2 | 1973689..1974168 | PHAGE_Salmon_SPN9CC: phage lysozyme; VIBHAR_01975; phage(gi389060531) | 3e-46 | Click |
| 3 | 1974150..1974632 | PHAGE_Entero_HK630: cell lysis protein Rz; VIBHAR_01976; phage(gi428782852) | 3e-15 | Click |
| 4 | 1974747..1975349 | PHAGE_Vibrio_VHML: ORF21; VIBHAR_01977; phage(gi27311188) | 3e-23 | Click |
| 5 | 1975306..1977213 | PHAGE_Pseudo_F10: Putative large subunit (GpA homolog) of DNA packaging dimer; VIBHAR_01978; phage(gi148912767) | 1e-114 | Click |
| 6 | 1977210..1977419 | PHAGE_Entero_HK630: head-tail connector W; VIBHAR_01979; phage(gi428782790) | 5e-11 | Click |
| 7 | 1977419..1978975 | PHAGE_Entero_HK630: portal protein B; VIBHAR_01980; phage(gi428782791) | 1e-160 | Click |
| 8 | 1978968..1980320 | PHAGE_Entero_HK630: head maturation protease C; VIBHAR_01981; phage(gi428782792) | 8e-96 | Click |
| 9 | 1980334..1980675 | PHAGE_Entero_mEp237: head decoration protein; VIBHAR_01982; phage(gi435439271) | 1e-08 | Click |
| 10 | 1980714..1981751 | PHAGE_Entero_HK630: major head subunit E; VIBHAR_01983; phage(gi428782795) | 4e-71 | Click |
| 11 | 1981817..1982308 | hypothetical protein; VIBHAR_01984 | N/A | Click |
| 12 | 1982311..1982727 | hypothetical protein; VIBHAR_01985 | N/A | Click |
| 13 | 1982750..1983367 | PHAGE_Halomo_1: hypothetical protein HAPgp07; VIBHAR_01986; phage(gi167832352) | 6e-16 | Click |
| 14 | 1983348..1983914 | PHAGE_Halomo_1: hypothetical protein HAPgp08; VIBHAR_01987; phage(gi167832353) | 3e-12 | Click |
| 15 | 1983880..1984518 | PHAGE_Halomo_1: putative baseplate assembly protein V; VIBHAR_01988; phage(gi167832354) | 7e-23 | Click |
| 16 | 1984518..1984868 | PHAGE_Halomo_1: putative baseplate assembly protein; VIBHAR_01989; phage(gi167832355) | 1e-17 | Click |
| 17 | 1984878..1985891 | PHAGE_Halomo_1: putative baseplate assembly protein J; VIBHAR_01990; phage(gi167832356) | 7e-54 | Click |
| 18 | 1986046..1986612 | PHAGE_Halomo_1: putative tail protein; VIBHAR_01991; phage(gi167832357) | 7e-13 | Click |
| 19 | 1986609..1987142 | PHAGE_Halomo_1: putative tail protein; VIBHAR_01992; phage(gi167832358) | 8e-32 | Click |
| 20 | 1987155..1987883 | PHAGE_Vibrio_VP882: hypothetical protein VPVV882_gp25; VIBHAR_01993; phage(gi126010867) | 3e-10 | Click |
| 21 | 1987886..1988119 | hypothetical protein; VIBHAR_01994 | N/A | Click |
| 22 | 1988206..1988403 | hypothetical protein; VIBHAR_01995 | N/A | Click |
| 23 | 1988407..1989570 | PHAGE_Halomo_1: putative tail sheath protein; VIBHAR_01996; phage(gi167832365) | 8e-100 | Click |
| 24 | 1989570..1990076 | PHAGE_Halomo_1: putative tail tube protein; VIBHAR_01997; phage(gi167832366) | 6e-21 | Click |
| 25 | 1990150..1990743 | PHAGE_Halomo_1: hypothetical protein HAPgp22; VIBHAR_01998; phage(gi167832367) | 1e-14 | Click |
| 26 | 1990862..1993855 | PHAGE_Halomo_1: putative tail tape measure; VIBHAR_01999; phage(gi167832368) | 6e-97 | Click |
| 27 | 1993852..1994253 | PHAGE_Halomo_1: putative tail protein; VIBHAR_02000; phage(gi167832369) | 3e-21 | Click |
| 28 | 1994250..1994471 | hypothetical protein; VIBHAR_02001 | N/A | Click |
| 29 | 1994462..1995475 | PHAGE_Halomo_1: putative tail protein; VIBHAR_02002; phage(gi167832370) | 6e-79 | Click |
| 30 | complement(1995702..1996658) | PHAGE_Thermu_26: phage XerD-like integrase; VIBHAR_02003; phage(gi157265417) | 2e-09 | Click |
| 31 | 1996896..1997726 | hypothetical protein; VIBHAR_02004 | N/A | Click |
| 32 | complement(1998041..1998163) | hypothetical protein; VIBHAR_02005 | N/A | Click |
| 33 | complement(1998197..1999240) | PROPHAGE_Shewan_MR-1: IS110 family transposase; VIBHAR_02006; phage(gi24375433) | 3e-08 | Click |
| 34 | complement(1999444..2000643) | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_02007; phage(gi24375070) | 9e-97 | Click |
| 35 | complement(2000746..2001147) | hypothetical protein; VIBHAR_02008 | N/A | Click |
| 36 | 2001642..2002859 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_02009; phage(gi24375070) | 9e-97 | Click |
| 37 | 2002950..2003450 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_02010; phage(gi24375070) | 3e-26 | Click |
| 38 | 2003437..2004144 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; VIBHAR_02011; phage(gi24375070) | 7e-38 | Click |
| 39 | complement(2004247..2005716) | PHAGE_Melano_entomopoxvirus: ORF MSV061 putative LINE reverse transcriptase, similar to Caenorhabditis elegans GB:U00063; VIBHAR_02012; phage(gi9631308) | 6e-05 | Click |
| 40 | complement(2005697..2005864) | hypothetical protein; VIBHAR_02013 | N/A | Click |
| 41 | 2006383..2006772 | hypothetical protein; VIBHAR_02014 | N/A | Click |
| 42 | 2007194..2007520 | hypothetical protein; VIBHAR_02015 | N/A | Click |
| 43 | 2007517..2007870 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf1; VIBHAR_02016; phage(gi26990788) | 1e-21 | Click |
| 44 | 2007907..2008257 | hypothetical protein; VIBHAR_02017 | N/A | Click |
| 45 | 2008247..2009473 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; VIBHAR_02018; phage(gi26990787) | 1e-92 | Click |
| 46 | 2009588..2009615 | attR AAGTGCCCCATTCCTTCTCAGCGCGAAA | N/A | Click |
Region 5, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2303681..2305411 | PHAGE_Ectoca_1: EsV-1-65; VIBHAR_02306; phage(gi13242537) | 3e-39 | Click |
| 2 | complement(2305581..2305949) | PHAGE_Vibrio_VGJphi: hypothetical protein VGJphip11; VIBHAR_02307; phage(gi30039754) | 8e-47 | Click |
| 3 | 2306097..2306750 | PHAGE_Vibrio_VP882: putative exonuclease; VIBHAR_02308; phage(gi126010887) | 6e-34 | Click |
| 4 | 2306754..2306969 | hypothetical protein; VIBHAR_02309 | N/A | Click |
| 5 | 2306953..2308098 | PHAGE_Vibrio_VfO4K68: Vpf402; VIBHAR_02310; phage(gi9635486) | 0.0 | Click |
| 6 | 2308102..2308461 | PHAGE_Vibrio_VfO4K68: Vpf119; VIBHAR_02311; phage(gi9635479) | 3e-61 | Click |
| 7 | 2308467..2308697 | PHAGE_Vibrio_VfO4K68: Vpf76; VIBHAR_02312; phage(gi9635480) | 7e-35 | Click |
| 8 | 2308703..2308951 | PHAGE_Vibrio_VfO4K68: Vpf81; VIBHAR_02313; phage(gi9635481) | 1e-30 | Click |
| 9 | 2308964..2309074 | hypothetical protein; VIBHAR_02314 | N/A | Click |
| 10 | complement(2309325..2309474) | hypothetical protein; VIBHAR_02315 | N/A | Click |
| 11 | 2309477..2310574 | PHAGE_Vibrio_VfO4K68: Vpf504; VIBHAR_02316; phage(gi9635482) | 2e-143 | Click |
| 12 | 2310555..2310920 | PHAGE_Vibrio_VfO4K68: Vpf114; VIBHAR_02317; phage(gi9635483) | 2e-43 | Click |
| 13 | 2311042..2312310 | PHAGE_Vibrio_VfO4K68: Vpf461; VIBHAR_02318; phage(gi9635484) | 0.0 | Click |
| 14 | 2312919..2313104 | hypothetical protein; VIBHAR_02319 | N/A | Click |
| 15 | 2313481..2313855 | hypothetical protein; VIBHAR_02320 | N/A | Click |
| 16 | 2313746..2313871 | hypothetical protein; VIBHAR_02321 | N/A | Click |
| 17 | 2313982..2316648 | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; VIBHAR_02322; phage(gi9631364) | 5e-15 | Click |