| Definition | Clostridium botulinum F str. Langeland, complete genome. |
|---|---|
| Accession | NC_009699 |
| Length | 3,995,387 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 32 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2013018..2013029 | attL ATTTATTGTATT | N/A | Click |
| 2 | complement(2013245..2013526) | integrase domain-containing protein; CLI_1875 | N/A | Click |
| 3 | complement(2014408..2014995) | PHAGE_Deep_s_D6E: structure protein; CLI_1876; phage(gi423262348) | 2e-08 | Click |
| 4 | complement(2015124..2015882) | PHAGE_Clostr_phi8074_B1: endolysin CS74L; CLI_1877; phage(gi431810380) | 8e-54 | Click |
| 5 | complement(2015923..2016117) | hypothetical protein; CLI_1878 | N/A | Click |
| 6 | complement(2016131..2016385) | PHAGE_Clostr_phiSM101: hypothetical protein; CLI_1879; phage(gi110804030) | 5e-13 | Click |
| 7 | complement(2016532..2016726) | hypothetical protein; CLI_1880 | N/A | Click |
| 8 | complement(2017121..2017288) | hypothetical protein; CLI_1881 | N/A | Click |
| 9 | complement(2017329..2017544) | hypothetical protein; CLI_1882 | N/A | Click |
| 10 | complement(2017546..2017905) | hypothetical protein; CLI_1883 | N/A | Click |
| 11 | complement(2017921..2018508) | hypothetical protein; CLI_1884 | N/A | Click |
| 12 | complement(2018526..2018987) | hypothetical protein; CLI_1885 | N/A | Click |
| 13 | complement(2018984..2019805) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLI_1886; phage(gi326536865) | 8e-58 | Click |
| 14 | complement(2019812..2020969) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLI_1887; phage(gi326536864) | 2e-44 | Click |
| 15 | complement(2020973..2021842) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CLI_1888; phage(gi326536863) | 5e-51 | Click |
| 16 | complement(2021858..2025358) | PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; CLI_1889; phage(gi110804068) | 0.0 | Click |
| 17 | complement(2025375..2025554) | hypothetical protein; CLI_1890 | N/A | Click |
| 18 | complement(2025614..2025958) | PHAGE_Clostr_phiSM101: hypothetical protein; CLI_1891; phage(gi110804055) | 1e-13 | Click |
| 19 | complement(2026020..2026607) | PHAGE_Clostr_phiSM101: phage major tail protein, phi13 family subfamily; CLI_1892; phage(gi110804026) | 4e-43 | Click |
| 20 | complement(2026689..2027045) | PHAGE_Bacill_BtCS33: putative structure protein; CLI_1893; phage(gi392972718) | 6e-12 | Click |
| 21 | complement(2027056..2027415) | PHAGE_Clostr_phiSM101: phage protein, HK97 gp10 family; CLI_1894; phage(gi110804042) | 5e-25 | Click |
| 22 | complement(2027415..2027783) | PHAGE_Clostr_phiSM101: putative phage head-tail adaptor; CLI_1895; phage(gi110804032) | 7e-13 | Click |
| 23 | complement(2027773..2028066) | PHAGE_Clostr_phiSM101: putative DNA packaging protein; CLI_1896; phage(gi110804046) | 5e-12 | Click |
| 24 | complement(2028151..2029383) | PHAGE_Clostr_phiSM101: phage major capsid protein, HK97 family; CLI_1897; phage(gi110804052) | 6e-101 | Click |
| 25 | complement(2029435..2030178) | PHAGE_Bacill_phIS3501: ATP-dependent Clp protease; CLI_1898; phage(gi422934330) | 4e-34 | Click |
| 26 | complement(2030171..2031403) | PHAGE_Clostr_phiSM101: phage portal protein, HK97 family; CLI_1899; phage(gi110804051) | 1e-58 | Click |
| 27 | complement(2031465..2031647) | hypothetical protein; CLI_1900 | N/A | Click |
| 28 | complement(2031671..2033428) | PHAGE_Geobac_E2: putative terminase large subunit; CLI_1901; phage(gi148747729) | 2e-120 | Click |
| 29 | complement(2033429..2033914) | PHAGE_Geobac_E2: putative terminase small subunit; CLI_1902; phage(gi148747728) | 1e-24 | Click |
| 30 | complement(2034062..2034529) | PHAGE_Clostr_phiSM101: HNH endonuclease domain protein; CLI_1903; phage(gi110804050) | 5e-37 | Click |
| 31 | complement(2034622..2036415) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; CLI_1904; phage(gi9631364) | 6e-15 | Click |
| 32 | complement(2036402..2036653) | hypothetical protein; CLI_1905 | N/A | Click |
| 33 | complement(2036634..2037227) | PHAGE_Staphy_JD007: exonuclease; CLI_1906; phage(gi428783211) | 2e-05 | Click |
| 34 | 2039975..2039986 | attR ATTTATTGTATT | N/A | Click |
Region 2, total : 69 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2525101..2525859) | PHAGE_Clostr_phiMMP04: cell wall hydrolase; CLI_2382; phage(gi414090458) | 3e-20 | Click |
| 2 | complement(2526399..2526515) | hypothetical protein; CLI_2383 | N/A | Click |
| 3 | 2528317..2528559 | PHAGE_Clostr_phiC2: putative repressor; CLI_2385; phage(gi134287382) | 2e-09 | Click |
| 4 | 2528744..2528857 | hypothetical protein; CLI_2386 | N/A | Click |
| 5 | complement(2528977..2529378) | PHAGE_Salisa_1: hypothetical protein; CLI_2387; phage(gi388570712) | 9e-08 | Click |
| 6 | complement(2529423..2529668) | hypothetical protein; CLI_2388 | N/A | Click |
| 7 | complement(2529674..2529865) | PHAGE_Strept_M102: hypothetical protein M102_gp24; CLI_2389; phage(gi242345595) | 7e-06 | Click |
| 8 | complement(2530294..2531061) | PHAGE_Clostr_phi8074_B1: endolysin CS74L; CLI_2390; phage(gi431810380) | 1e-29 | Click |
| 9 | complement(2531106..2531321) | hypothetical protein; CLI_2391 | N/A | Click |
| 10 | complement(2531338..2531592) | PHAGE_Clostr_phiSM101: hypothetical protein; CLI_2392; phage(gi110804030) | 2e-15 | Click |
| 11 | complement(2531613..2532368) | hypothetical protein; CLI_2393 | N/A | Click |
| 12 | complement(2532530..2532712) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p34; CLI_2394; phage(gi134287367) | 5e-14 | Click |
| 13 | complement(2532714..2533055) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p33; CLI_2395; phage(gi134287366) | 3e-05 | Click |
| 14 | complement(2533067..2534248) | PHAGE_Clostr_phiC2: putative tail fiber protein; CLI_2396; phage(gi134287361) | 3e-46 | Click |
| 15 | complement(2534252..2534878) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p26; CLI_2397; phage(gi134287360) | 4e-25 | Click |
| 16 | complement(2534859..2535953) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p25; CLI_2398; phage(gi134287359) | 6e-81 | Click |
| 17 | complement(2535954..2536361) | PHAGE_Strept_1: hypothetical protein EJ-1p60; CLI_2399; phage(gi39653734) | 6e-21 | Click |
| 18 | complement(2536364..2536708) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p23; CLI_2400; phage(gi134287358) | 9e-10 | Click |
| 19 | complement(2536711..2537685) | PHAGE_Clostr_phiC2: putative hydrolase; CLI_2401; phage(gi134287357) | 4e-62 | Click |
| 20 | complement(2537701..2538378) | PHAGE_Clostr_phiC2: putative LysM; CLI_2402; phage(gi134287356) | 1e-27 | Click |
| 21 | complement(2538378..2540537) | PHAGE_Clostr_phiC2: putative tail tape measure protein; CLI_2403; phage(gi134287355) | 5e-106 | Click |
| 22 | complement(2540595..2541356) | PHAGE_Thermo_THSA_485A: hypothetical protein; CLI_2404; phage(gi397912628) | 2e-33 | Click |
| 23 | complement(2541593..2542006) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p16; CLI_2405; phage(gi134287351) | 2e-18 | Click |
| 24 | complement(2542024..2542488) | PHAGE_Clostr_phiC2: putative core tail; CLI_2406; phage(gi134287349) | 3e-30 | Click |
| 25 | complement(2542492..2543802) | PHAGE_Clostr_phiC2: putative sheath tail protein; CLI_2407; phage(gi134287348) | 5e-80 | Click |
| 26 | complement(2543804..2543974) | PHAGE_Lactob_KC5a: hypothetical protein; CLI_2408; phage(gi90592619) | 1e-06 | Click |
| 27 | complement(2543964..2544353) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; CLI_2409; phage(gi134287347) | 2e-20 | Click |
| 28 | complement(2544404..2544568) | hypothetical protein; CLI_2410 | N/A | Click |
| 29 | complement(2544582..2545073) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p11; CLI_2411; phage(gi134287346) | 6e-20 | Click |
| 30 | complement(2545073..2545456) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p10; CLI_2412; phage(gi134287345) | 8e-12 | Click |
| 31 | complement(2545458..2545802) | PHAGE_Brocho_BL3: gp10; CLI_2413; phage(gi327409400) | 9e-08 | Click |
| 32 | complement(2545816..2546781) | PHAGE_Entero_phiFL3A: coat protein; CLI_2414; phage(gi281416261) | 2e-88 | Click |
| 33 | complement(2546801..2547406) | PHAGE_Bacill_SPP1: hypothetical protein SPP1p020; CLI_2415; phage(gi22855064) | 1e-27 | Click |
| 34 | complement(2547427..2547690) | PHAGE_Clostr_phiCP26F: hypothetical protein; CLI_2416; phage(gi422933951) | 2e-18 | Click |
| 35 | complement(2547707..2548075) | PHAGE_Bacill_vB_BceM_Bc431v3: putative structural protein; CLI_2417; phage(gi472437604) | 4e-14 | Click |
| 36 | complement(2548106..2548300) | hypothetical protein; CLI_2418 | N/A | Click |
| 37 | complement(2548317..2549348) | PHAGE_Clostr_phiC2: putative head morphogenesis protein; CLI_2419; phage(gi134287339) | 2e-77 | Click |
| 38 | complement(2549329..2550780) | PHAGE_Clostr_phiC2: putative portal protein; CLI_2420; phage(gi134287338) | 7e-80 | Click |
| 39 | complement(2550793..2552202) | PHAGE_Lactoc_1: TerL; CLI_2421; phage(gi13786562) | 1e-157 | Click |
| 40 | complement(2552195..2552782) | PHAGE_Aggreg_S1249: putative terminase small subunit TerS; CLI_2422; phage(gi273809571) | 1e-20 | Click |
| 41 | complement(2553005..2553556) | PHAGE_Clostr_PhiS63: gp40; CLI_2423; phage(gi388570666) | 2e-16 | Click |
| 42 | complement(2553543..2553920) | hypothetical protein; CLI_2424 | N/A | Click |
| 43 | complement(2553929..2555293) | PHAGE_Entero_phiFL4A: DNA helicase; CLI_2425; phage(gi281416462) | 2e-154 | Click |
| 44 | complement(2555296..2555463) | hypothetical protein; CLI_2426 | N/A | Click |
| 45 | complement(2555456..2555737) | PHAGE_Bacter_2: hypothetical protein APSE235; CLI_2427; phage(gi212499740) | 1e-18 | Click |
| 46 | complement(2555892..2556032) | hypothetical protein; CLI_2428 | N/A | Click |
| 47 | complement(2555998..2558421) | PHAGE_Entero_phiFL4A: VirE domain protein; CLI_2429; phage(gi281416460) | 0.0 | Click |
| 48 | complement(2558468..2559493) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p75; CLI_2430; phage(gi134287407) | 1e-47 | Click |
| 49 | complement(2559537..2559821) | hypothetical protein; CLI_2431 | N/A | Click |
| 50 | complement(2559860..2560090) | PHAGE_Clostr_phiCP13O: hypothetical protein; CLI_2432; phage(gi422935104) | 2e-10 | Click |
| 51 | complement(2560139..2561569) | PHAGE_Pectob_ZF40: putative methylase; CLI_2433; phage(gi422936661) | 2e-104 | Click |
| 52 | complement(2561611..2563587) | PHAGE_Bacill_PBC1: DNA polymerase; CLI_2434; phage(gi389060355) | 0.0 | Click |
| 53 | complement(2563608..2563787) | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp58; CLI_2435; phage(gi90592694) | 1e-11 | Click |
| 54 | complement(2563818..2563988) | hypothetical protein; CLI_2436 | N/A | Click |
| 55 | complement(2564070..2564624) | PHAGE_Staphy_2638A: ORF018; CLI_2437; phage(gi66395467) | 1e-58 | Click |
| 56 | complement(2564702..2565847) | PHAGE_Staphy_2638A: ORF010; CLI_2438; phage(gi66395460) | 2e-93 | Click |
| 57 | complement(2565847..2566011) | hypothetical protein; CLI_2439 | N/A | Click |
| 58 | complement(2566011..2566457) | PHAGE_Entero_1: major capsid protein; CLI_2440; phage(gi225626393) | 2e-05 | Click |
| 59 | complement(2566503..2566757) | hypothetical protein; CLI_2441 | N/A | Click |
| 60 | complement(2566757..2567008) | PHAGE_Clostr_phi3626: Gp30 protein; CLI_2442; phage(gi20065993) | 2e-06 | Click |
| 61 | complement(2567072..2567623) | PHAGE_Bacill_BCP78: putative RNA polymerase sigma 28 subunit SigF; CLI_2443; phage(gi410492877) | 2e-12 | Click |
| 62 | complement(2567828..2567986) | hypothetical protein; CLI_2444 | N/A | Click |
| 63 | complement(2567983..2568834) | PHAGE_Brocho_BL3: gp34; CLI_2445; phage(gi327409426) | 2e-59 | Click |
| 64 | complement(2568896..2569039) | hypothetical protein; CLI_2446 | N/A | Click |
| 65 | complement(2569127..2569330) | PHAGE_Strept_858: orf44; CLI_2447; phage(gi168229317) | 1e-05 | Click |
| 66 | 2569622..2569999 | PHAGE_Clostr_phiC2: putative repressor; CLI_2448; phage(gi134287382) | 1e-06 | Click |
| 67 | 2570011..2571561 | PHAGE_Strept_phiNJ2: putative recombinase; CLI_2449; phage(gi414090258) | 1e-36 | Click |
| 68 | 2571686..2572831 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; CLI_2450 | N/A | Click |
| 69 | complement(2572882..2574312) | adenylosuccinate lyase; CLI_2451 | N/A | Click |
| 70 | 2574550..2574771 | PHAGE_Megavi_lba: hypothetical protein; CLI_2452; phage(gi448825889) | 9e-06 | Click |
Region 3, total : 32 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3416374..3416385 | attL AAATCAATTTAA | N/A | Click |
| 2 | complement(3430707..3431609) | PHAGE_Clostr_phiCPV4: N-acetylmuramoyl-L-alanine amidase; CLI_3252; phage(gi392972663) | 1e-35 | Click |
| 3 | complement(3431749..3432165) | PHAGE_Clostr_phiCTP1: predicted holin; CLI_3253; phage(gi304360690) | 9e-36 | Click |
| 4 | complement(3432262..3432384) | hypothetical protein; CLI_3254 | N/A | Click |
| 5 | complement(3432377..3432772) | hypothetical protein; CLI_3255 | N/A | Click |
| 6 | complement(3432786..3434450) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLI_3256; phage(gi326536865) | 9e-82 | Click |
| 7 | complement(3434457..3435380) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLI_3257; phage(gi326536864) | 6e-108 | Click |
| 8 | complement(3435528..3436397) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CLI_3258; phage(gi326536863) | 6e-112 | Click |
| 9 | complement(3436414..3441894) | PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; CLI_3259; phage(gi110804068) | 7e-174 | Click |
| 10 | complement(3441948..3442076) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLI_3260; phage(gi326536860) | 2e-09 | Click |
| 11 | complement(3442163..3442450) | PHAGE_Bacill_phIS3501: phage protein; CLI_3261; phage(gi422934337) | 5e-08 | Click |
| 12 | complement(3442486..3443067) | PHAGE_Bacill_phIS3501: phage major tail protein; CLI_3262; phage(gi422934336) | 8e-23 | Click |
| 13 | complement(3443067..3443414) | PHAGE_Bacill_phIS3501: phage protein; CLI_3263; phage(gi422934335) | 2e-08 | Click |
| 14 | complement(3443411..3443794) | PHAGE_Bacill_phIS3501: gp10 family phage protein; CLI_3264; phage(gi422934334) | 7e-18 | Click |
| 15 | complement(3443787..3444113) | PHAGE_Bacill_phIS3501: phage head-tail adaptor; CLI_3265; phage(gi422934333) | 4e-11 | Click |
| 16 | complement(3444094..3444423) | PHAGE_Bacill_phIS3501: phage DNA packaging protein; CLI_3266; phage(gi422934332) | 1e-09 | Click |
| 17 | complement(3444440..3444595) | hypothetical protein; CLI_3267 | N/A | Click |
| 18 | complement(3444615..3445742) | PHAGE_Staphy_phi7401PVL: phage major capsid protein; CLI_3268; phage(gi448244667) | 5e-85 | Click |
| 19 | complement(3445735..3446535) | PHAGE_Bacill_phIS3501: ATP-dependent Clp protease; CLI_3269; phage(gi422934330) | 4e-64 | Click |
| 20 | complement(3446571..3447764) | PHAGE_Staphy_phi7401PVL: portal protein; CLI_3270; phage(gi448244665) | 1e-70 | Click |
| 21 | complement(3447780..3449477) | PHAGE_Bacill_phIS3501: terminase large subunit; CLI_3271; phage(gi422934328) | 5e-178 | Click |
| 22 | complement(3449474..3449947) | PHAGE_Bacill_phi105: hypothetical protein phi105_01; CLI_3272; phage(gi22854994) | 1e-53 | Click |
| 23 | complement(3450205..3450678) | PHAGE_Clostr_PhiS63: gp43; CLI_3273; phage(gi388570669) | 8e-19 | Click |
| 24 | complement(3450678..3450971) | hypothetical protein; CLI_3274 | N/A | Click |
| 25 | complement(3451005..3451346) | hypothetical protein; CLI_3275 | N/A | Click |
| 26 | complement(3451384..3451659) | PHAGE_Clostr_phiSM101: hypothetical protein; CLI_3276; phage(gi110804065) | 5e-09 | Click |
| 27 | 3451760..3451771 | attR AAATCAATTTAA | N/A | Click |
| 28 | complement(3451813..3452358) | PHAGE_Bacill_phIS3501: site-specific phage integrase; CLI_3277; phage(gi422934319) | 1e-52 | Click |
| 29 | complement(3452360..3452593) | hypothetical protein; CLI_3278 | N/A | Click |
| 30 | complement(3452802..3453188) | hypothetical protein; CLI_3279 | N/A | Click |
| 31 | complement(3453178..3453345) | hypothetical protein; CLI_3280 | N/A | Click |
| 32 | complement(3453348..3453491) | hypothetical protein; CLI_3281 | N/A | Click |
| 33 | complement(3453506..3453664) | hypothetical protein; CLI_3282 | N/A | Click |
| 34 | complement(3453755..3454804) | PHAGE_Clostr_phiMMP02: hypothetical protein; CLI_3283; phage(gi414090433) | 2e-42 | Click |