| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 54 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2542387..2542398 | attL AAACATTAAAAA | N/A | Click |
| 2 | 2544896..2544907 | attL AAAAATTTGTCA | N/A | Click |
| 3 | 2547623..2547634 | attL TTATTATTTAAT | N/A | Click |
| 4 | complement(2557334..2558038) | PHAGE_Clostr_phiZP2: N-acetylmuramoyl-L-alanine amidase; CLB_2427; phage(gi392972694) | 1e-34 | Click |
| 5 | complement(2558078..2558272) | hypothetical protein; CLB_2428 | N/A | Click |
| 6 | complement(2558286..2558540) | PHAGE_Clostr_phiSM101: hypothetical protein; CLB_2429; phage(gi110804030) | 5e-14 | Click |
| 7 | complement(2558619..2559494) | hypothetical protein; CLB_2430 | N/A | Click |
| 8 | complement(2559646..2559819) | hypothetical protein; CLB_2431 | N/A | Click |
| 9 | complement(2560043..2560585) | hypothetical protein; CLB_2432 | N/A | Click |
| 10 | complement(2560915..2561097) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2433; phage(gi326536871) | 8e-15 | Click |
| 11 | complement(2561099..2561425) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2434; phage(gi326536870) | 8e-09 | Click |
| 12 | complement(2561437..2562846) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLB_2435; phage(gi326536865) | 9e-82 | Click |
| 13 | complement(2562846..2563724) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2436; phage(gi326536864) | 1e-97 | Click |
| 14 | complement(2563917..2564783) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CLB_2437; phage(gi326536863) | 2e-112 | Click |
| 15 | complement(2564800..2570112) | PHAGE_Clostr_phiCD6356: putative phage tail tape measure protein; CLB_2438; phage(gi326536862) | 0.0 | Click |
| 16 | complement(2570367..2570693) | hypothetical protein; CLB_2439 | N/A | Click |
| 17 | complement(2570729..2571310) | PHAGE_Clostr_phiCD6356: putative phage major tail protein; CLB_2440; phage(gi326536858) | 1e-61 | Click |
| 18 | complement(2571313..2571657) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2441; phage(gi326536857) | 4e-21 | Click |
| 19 | complement(2571654..2572028) | PHAGE_Clostr_phiCD6356: putative head-tail joining protein; CLB_2442; phage(gi326536856) | 4e-33 | Click |
| 20 | complement(2572030..2572356) | PHAGE_Lactob_c5: putative head-tail adaptor; CLB_2443; phage(gi418488161) | 6e-09 | Click |
| 21 | complement(2572337..2572657) | PHAGE_Clostr_phiMMP04: head-tail connector; CLB_2444; phage(gi414090447) | 2e-06 | Click |
| 22 | complement(2572674..2572829) | Rho termination factor domain-containing protein; CLB_2445 | N/A | Click |
| 23 | complement(2572849..2573976) | PHAGE_Staphy_phi7401PVL: phage major capsid protein; CLB_2446; phage(gi448244667) | 1e-88 | Click |
| 24 | complement(2573969..2574727) | PHAGE_Lactob_JCL1032: putative ClpP protease; CLB_2447; phage(gi418489116) | 1e-59 | Click |
| 25 | complement(2574717..2575901) | PHAGE_Staphy_phi7401PVL: portal protein; CLB_2448; phage(gi448244665) | 3e-70 | Click |
| 26 | complement(2575917..2577617) | PHAGE_Geobac_E2: putative terminase large subunit; CLB_2449; phage(gi148747729) | 0.0 | Click |
| 27 | complement(2577614..2578078) | PHAGE_Bacill_phi105: hypothetical protein phi105_01; CLB_2450; phage(gi22854994) | 1e-54 | Click |
| 28 | complement(2578114..2578467) | hypothetical protein; CLB_2451 | N/A | Click |
| 29 | complement(2578554..2579027) | PHAGE_Geobac_E2: Putative HNH endonuclease; CLB_2452; phage(gi158380388) | 5e-18 | Click |
| 30 | complement(2579027..2579320) | hypothetical protein; CLB_2453 | N/A | Click |
| 31 | complement(2579322..2579627) | hypothetical protein; CLB_2454 | N/A | Click |
| 32 | complement(2579892..2580074) | hypothetical protein; CLB_2455 | N/A | Click |
| 33 | complement(2580103..2580378) | PHAGE_Clostr_phiSM101: hypothetical protein; CLB_2456; phage(gi110804065) | 2e-08 | Click |
| 34 | complement(2580532..2581077) | PHAGE_Clostr_phiCD6356: putative site-specific recombinase; CLB_2457; phage(gi326536904) | 4e-58 | Click |
| 35 | complement(2581074..2581289) | hypothetical protein; CLB_2458 | N/A | Click |
| 36 | 2581510..2581521 | attR TTATTATTTAAT | N/A | Click |
| 37 | complement(2581513..2581902) | hypothetical protein; CLB_2459 | N/A | Click |
| 38 | complement(2581892..2582059) | hypothetical protein; CLB_2460 | N/A | Click |
| 39 | complement(2582217..2583062) | PHAGE_Thermu_26: phage XerD-like integrase; CLB_2461; phage(gi157265417) | 1e-18 | Click |
| 40 | complement(2583353..2583484) | hypothetical protein; CLB_2462 | N/A | Click |
| 41 | complement(2583575..2584624) | PHAGE_Clostr_phiMMP02: hypothetical protein; CLB_2463; phage(gi414090433) | 9e-42 | Click |
| 42 | complement(2584659..2584859) | hypothetical protein; CLB_2464 | N/A | Click |
| 43 | complement(2584903..2585850) | PHAGE_Entero_phiFL3A: DNA cytosine methyltransferase; CLB_2465; phage(gi281416239) | 7e-104 | Click |
| 44 | complement(2585893..2586612) | hypothetical protein; CLB_2466 | N/A | Click |
| 45 | complement(2586677..2587045) | PHAGE_Halovi_HVTV_1: MazG-like protein; CLB_2467; phage(gi443404610) | 6e-15 | Click |
| 46 | complement(2587045..2587587) | hypothetical protein; CLB_2468 | N/A | Click |
| 47 | complement(2587588..2588421) | PHAGE_Brocho_BL3: gp46; CLB_2469; phage(gi327409438) | 6e-53 | Click |
| 48 | complement(2588517..2588786) | PHAGE_Thermo_THSA_485A: hypothetical protein; CLB_2470; phage(gi397912646) | 2e-08 | Click |
| 49 | complement(2588803..2588985) | hypothetical protein; CLB_2471 | N/A | Click |
| 50 | complement(2588987..2589247) | hypothetical protein; CLB_2472 | N/A | Click |
| 51 | 2589313..2589513 | hypothetical protein; CLB_2474 | N/A | Click |
| 52 | complement(2589503..2589685) | hypothetical protein; CLB_2473 | N/A | Click |
| 53 | complement(2589698..2590462) | PHAGE_Lactoc_bIL285: anti-repressor; CLB_2475; phage(gi13095686) | 3e-40 | Click |
| 54 | complement(2590580..2590696) | hypothetical protein; CLB_2476 | N/A | Click |
| 55 | complement(2590834..2591037) | putative DNA-binding protein; CLB_2477 | N/A | Click |
| 56 | 2591173..2591184 | attR AAAAATTTGTCA | N/A | Click |
| 57 | 2591244..2591609 | PHAGE_Clostr_PhiS63: gp26; CLB_2478; phage(gi388570671) | 3e-06 | Click |
| 58 | 2591621..2593135 | PHAGE_Bacill_SPBc2: site-specific recombinase; CLB_2479; phage(gi9630126) | 3e-56 | Click |
| 59 | complement(2593141..2593575) | PHAGE_Bacill_vB_BceM_Bc431v3: putative RNA polymerase sigma factor G; CLB_2480; phage(gi472437547) | 3e-13 | Click |
| 60 | 2595388..2595399 | attR AAACATTAAAAA | N/A | Click |
Region 2, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2959491..2959503 | attL TTATATAAATAAA | N/A | Click |
| 2 | complement(2964481..2965191) | PHAGE_Clostr_phiZP2: N-acetylmuramoyl-L-alanine amidase; CLB_2813; phage(gi392972694) | 8e-34 | Click |
| 3 | complement(2965334..2965561) | hypothetical protein; CLB_2814 | N/A | Click |
| 4 | complement(2965582..2965803) | hypothetical protein; CLB_2815 | N/A | Click |
| 5 | complement(2965933..2966067) | hypothetical protein; CLB_2816 | N/A | Click |
| 6 | complement(2966169..2966699) | sigma-70 family RNA polymerase sigma factor; CLB_2817 | N/A | Click |
| 7 | 2967113..2967619 | hypothetical protein; CLB_2818 | N/A | Click |
| 8 | complement(2967824..2968702) | PHAGE_Geobac_E2: putative replication protein; CLB_2819; phage(gi148747766) | 3e-55 | Click |
| 9 | complement(2968779..2969018) | hypothetical protein; CLB_2820 | N/A | Click |
| 10 | complement(2969025..2969234) | excisionase family DNA-binding protein; CLB_2821 | N/A | Click |
| 11 | complement(2969299..2969520) | hypothetical protein; CLB_2822 | N/A | Click |
| 12 | 2969737..2970288 | PHAGE_Bacill_phi105: immunity repressor; CLB_2823; phage(gi22855027) | 1e-05 | Click |
| 13 | 2970328..2970340 | attR TTATATAAATAAA | N/A | Click |
| 14 | 2970361..2971500 | PHAGE_Clostr_phiC2: putative integrase; CLB_2824; phage(gi134287379) | 7e-117 | Click |
| 15 | complement(2971585..2972937) | PHAGE_Acanth_moumouvirus: SAM-dependent methyltransferase; CLB_2825; phage(gi441432344) | 1e-34 | Click |
| 16 | complement(2973224..2973670) | PHAGE_Entero_1: major capsid protein; CLB_2826; phage(gi225626393) | 3e-05 | Click |
Region 3, total : 8 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3034857..3034868 | attL AAAAGAATATCC | N/A | Click |
| 2 | complement(3047348..3049510) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; CLB_2888; phage(gi9631364) | 1e-09 | Click |
| 3 | complement(3049818..3050570) | PHAGE_Staphy_JD007: glycerophosphoryl diester phosphodiesterase; CLB_2889; phage(gi428783010) | 2e-25 | Click |
| 4 | complement(3050949..3051911) | PHAGE_Clostr_phiCD38_2: tail tape measure; CLB_2890; phage(gi333798123) | 1e-06 | Click |
| 5 | 3052372..3053625 | PHAGE_Parame_NY2A: hypothetical protein NY2A_B796L; CLB_2891; phage(gi157953100) | 3e-24 | Click |
| 6 | complement(3054097..3054216) | hypothetical protein; CLB_2894 | N/A | Click |
| 7 | complement(3054314..3054847) | hypothetical protein; CLB_2895 | N/A | Click |
| 8 | 3054754..3054765 | attR AAAAGAATATCC | N/A | Click |
| 9 | 3055064..3055216 | PHAGE_Bacill_phBC6A52: DNA integration/recombination/invertion protein; CLB_2896; phage(gi31415821) | 2e-05 | Click |
| 10 | complement(3055694..3056428) | PHAGE_Glossi_virus: hypothetical protein SGHV062; CLB_2897; phage(gi168804078) | 3e-09 | Click |
Region 4, total : 60 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3100431..3100442 | attL TATTTTTTAACA | N/A | Click |
| 2 | 3100741..3100752 | attL TTTATTTTTTAT | N/A | Click |
| 3 | 3101695..3101973 | PHAGE_Clostr_CD119: RepR; putative repressor; CLB_2940; phage(gi90592681) | 6e-14 | Click |
| 4 | complement(3102008..3102595) | PHAGE_Deep_s_D6E: structure protein; CLB_2941; phage(gi423262348) | 2e-07 | Click |
| 5 | complement(3102822..3103418) | PHAGE_Clostr_st: hypothetical protein CST194; CLB_2942; phage(gi80159880) | 1e-16 | Click |
| 6 | complement(3103409..3104635) | PHAGE_Clostr_st: hypothetical protein CST193; CLB_2943; phage(gi80159879) | 5e-31 | Click |
| 7 | complement(3104632..3104781) | hypothetical protein; CLB_2944 | N/A | Click |
| 8 | complement(3104916..3105467) | hypothetical protein; CLB_2945 | N/A | Click |
| 9 | complement(3105553..3105714) | hypothetical protein; CLB_2946 | N/A | Click |
| 10 | complement(3105836..3106036) | putative DNA-binding protein; CLB_2947 | N/A | Click |
| 11 | complement(3106217..3106462) | hypothetical protein; CLB_2948 | N/A | Click |
| 12 | complement(3106459..3106635) | PHAGE_Lactob_phiadh: hypothetical protein phiadhp63; CLB_2949; phage(gi9633063) | 5e-09 | Click |
| 13 | complement(3106765..3107535) | PHAGE_Clostr_phi8074_B1: endolysin CS74L; CLB_2950; phage(gi431810380) | 3e-31 | Click |
| 14 | complement(3107580..3107996) | PHAGE_Bacill_IEBH: holin; CLB_2951; phage(gi197261577) | 1e-26 | Click |
| 15 | complement(3108086..3108790) | PHAGE_Clostr_phiSM101: autolytic lysozyme; CLB_2952; phage(gi110804057) | 6e-40 | Click |
| 16 | complement(3108831..3109019) | hypothetical protein; CLB_2953 | N/A | Click |
| 17 | complement(3109033..3109287) | PHAGE_Clostr_phiSM101: hypothetical protein; CLB_2954; phage(gi110804030) | 6e-15 | Click |
| 18 | complement(3109374..3109805) | hypothetical protein; CLB_2955 | N/A | Click |
| 19 | complement(3109806..3110477) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; CLB_2956; phage(gi399498806) | 9e-11 | Click |
| 20 | complement(3110588..3110770) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2957; phage(gi326536871) | 8e-15 | Click |
| 21 | complement(3110772..3111098) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2958; phage(gi326536870) | 8e-09 | Click |
| 22 | complement(3111110..3112540) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLB_2959; phage(gi326536865) | 3e-72 | Click |
| 23 | complement(3112540..3113625) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2960; phage(gi326536864) | 1e-88 | Click |
| 24 | complement(3113629..3114498) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CLB_2961; phage(gi326536863) | 9e-92 | Click |
| 25 | complement(3114511..3119655) | PHAGE_Clostr_phiCD6356: putative phage tail tape measure protein; CLB_2962; phage(gi326536862) | 0.0 | Click |
| 26 | complement(3119708..3119890) | hypothetical protein; CLB_2963 | N/A | Click |
| 27 | complement(3119911..3120240) | hypothetical protein; CLB_2964 | N/A | Click |
| 28 | complement(3120241..3120840) | PHAGE_Clostr_phiCD6356: putative phage major tail protein; CLB_2965; phage(gi326536858) | 4e-65 | Click |
| 29 | complement(3120843..3121184) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2966; phage(gi326536857) | 3e-22 | Click |
| 30 | complement(3121273..3121647) | PHAGE_Clostr_phiCD6356: putative head-tail joining protein; CLB_2967; phage(gi326536856) | 2e-28 | Click |
| 31 | complement(3121649..3122008) | PHAGE_Bacill_phIS3501: phage head-tail adaptor; CLB_2968; phage(gi422934333) | 6e-07 | Click |
| 32 | complement(3121959..3122258) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2969; phage(gi326536853) | 8e-12 | Click |
| 33 | complement(3122268..3123413) | PHAGE_Clostr_phiCD6356: putative major capsid protein A; CLB_2970; phage(gi326536852) | 1e-126 | Click |
| 34 | complement(3123413..3124156) | PHAGE_Entero_mEp213: head maturation protease; CLB_2971; phage(gi428782594) | 3e-35 | Click |
| 35 | complement(3124159..3125220) | PHAGE_Clostr_phiCD6356: putative phage portal protein; CLB_2972; phage(gi326536850) | 1e-82 | Click |
| 36 | complement(3125326..3126972) | PHAGE_Clostr_phiCD6356: putative terminase large subunit; CLB_2973; phage(gi326536849) | 3e-151 | Click |
| 37 | complement(3126956..3127447) | PHAGE_Clostr_phiCD6356: putative terminase small subunit; CLB_2974; phage(gi326536848) | 5e-40 | Click |
| 38 | complement(3127939..3128247) | hypothetical protein; CLB_2975 | N/A | Click |
| 39 | complement(3128444..3128989) | PHAGE_Clostr_phiCD6356: putative site-specific recombinase; CLB_2976; phage(gi326536904) | 5e-53 | Click |
| 40 | complement(3128986..3129201) | hypothetical protein; CLB_2977 | N/A | Click |
| 41 | 3129280..3129291 | attR TTTATTTTTTAT | N/A | Click |
| 42 | complement(3129386..3129814) | hypothetical protein; CLB_2978 | N/A | Click |
| 43 | complement(3129798..3129968) | hypothetical protein; CLB_2979 | N/A | Click |
| 44 | complement(3129970..3130260) | hypothetical protein; CLB_2980 | N/A | Click |
| 45 | complement(3130253..3130405) | hypothetical protein; CLB_2981 | N/A | Click |
| 46 | complement(3130417..3131412) | PHAGE_Thermu_26: phage XerD-like integrase; CLB_2982; phage(gi157265417) | 4e-18 | Click |
| 47 | 3131463..3131474 | attL TTTTATTTTTTT | N/A | Click |
| 48 | complement(3131465..3131602) | hypothetical protein; CLB_2983 | N/A | Click |
| 49 | complement(3131711..3132142) | hypothetical protein; CLB_2984 | N/A | Click |
| 50 | complement(3132215..3133162) | PHAGE_Entero_phiFL3A: DNA cytosine methyltransferase; CLB_2985; phage(gi281416239) | 7e-104 | Click |
| 51 | complement(3133205..3133924) | hypothetical protein; CLB_2986 | N/A | Click |
| 52 | complement(3133983..3134267) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLB_2987; phage(gi326536901) | 6e-06 | Click |
| 53 | complement(3134258..3134773) | hypothetical protein; CLB_2988 | N/A | Click |
| 54 | complement(3134792..3135403) | PHAGE_Geobac_GBSV1: Similar to Bacillus virus 1 protein YP_001425588; CLB_2989; phage(gi158267610) | 2e-26 | Click |
| 55 | complement(3135492..3136388) | PHAGE_Strept_SM1: gp19; CLB_2990; phage(gi32469450) | 1e-46 | Click |
| 56 | complement(3136435..3136704) | PHAGE_Thermo_THSA_485A: hypothetical protein; CLB_2991; phage(gi397912646) | 2e-08 | Click |
| 57 | complement(3136721..3136903) | hypothetical protein; CLB_2992 | N/A | Click |
| 58 | complement(3136905..3137165) | hypothetical protein; CLB_2993 | N/A | Click |
| 59 | complement(3137177..3137938) | PHAGE_Lactoc_bIL285: anti-repressor; CLB_2994; phage(gi13095686) | 3e-41 | Click |
| 60 | complement(3137950..3138231) | excisionase family DNA-binding protein; CLB_2995 | N/A | Click |
| 61 | complement(3138203..3138445) | DNA-binding protein; CLB_2996 | N/A | Click |
| 62 | 3138648..3138980 | PHAGE_Lister_A500: gp33; CLB_2997; phage(gi157324992) | 8e-07 | Click |
| 63 | 3139041..3140204 | PHAGE_Lactoc_bIL310: integrase; CLB_2998; phage(gi13095863) | 2e-32 | Click |
| 64 | complement(3140356..3140446) | tRNA | N/A | Click |
| 65 | complement(3141074..3142981) | PHAGE_Cafete_BV_PW1: putative eIF-2gamma; CLB_3000; phage(gi310831469) | 2e-17 | Click |
| 66 | 3147732..3147743 | attR TTTTATTTTTTT | N/A | Click |
| 67 | 3154048..3154059 | attR TATTTTTTAACA | N/A | Click |