Definition Kineococcus radiotolerans SRS30216 chromosome, complete genome.
Accession NC_009664
Length 4,761,183
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 318301..318312  attL    TCCGGTGGTGCA  N/A  Click
2 318473..319489  PHAGE_Entero_P1: Cre; Krad_1908; phage(gi46401628)  1e-09  Click
3 complement(319542..320636)  PHAGE_Cafete_BV_PW1: putative ubiquitin-activating enzyme E1; Krad_1907; phage(gi310831425)  7e-07  Click
4 complement(320633..321475)  hypothetical protein; Krad_1906  N/A  Click
5 complement(321504..322199)  PHAGE_Cronob_vB_CsaM_GAP32: putative 5'3'-deoxyribonucleotidase; Krad_1905; phage(gi414087289)  2e-09  Click
6 322393..323670  PHAGE_Lactob_KC5a: putative minor tail protein; Krad_1904; phage(gi90592623)  5e-08  Click
7 323737..324495  PHAGE_Stenot_S1: hypothetical protein StPS1_gp24; Krad_1903; phage(gi213163923)  1e-33  Click
8 complement(324526..325347)  PHAGE_Mycoba_Spud: gp3; Krad_1902; phage(gi203460523)  9e-38  Click
9 334075..334086  attR    TCCGGTGGTGCA  N/A  Click
Region 2, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 474920..475303  PHAGE_Mycoba_Myrna: gp236; Krad_1737; phage(gi203454797)  2e-28  Click
2 475300..475455  hypothetical protein; Krad_1736  N/A  Click
3 475452..475757  hypothetical protein; Krad_1735  N/A  Click
4 475750..476058  hypothetical protein; Krad_1734  N/A  Click
5 476049..476228  PHAGE_Mycoba_Wee: gp41; Krad_1733; phage(gi318065832)  1e-16  Click
6 476225..476416  PHAGE_Mycoba_Wee: gp41; Krad_1732; phage(gi318065832)  1e-08  Click
7 476409..476771  hypothetical protein; Krad_1731  N/A  Click
8 476768..477532  hypothetical protein; Krad_1730  N/A  Click
9 477516..478025  PHAGE_Rhodoc_REQ2: hypothetical protein; Krad_1729; phage(gi372449900)  2e-15  Click
10 478281..478526  hypothetical protein; Krad_1728  N/A  Click
11 478523..478825  PHAGE_Mycoba_Brujita: gp74; Krad_1727; phage(gi206599618)  6e-15  Click
12 478822..479013  hypothetical protein; Krad_1726  N/A  Click
13 479171..479410  PHAGE_Mycoba_CrimD: gp4; Krad_1725; phage(gi304360857)  7e-26  Click
14 479358..479369  attL    CCGAGGACGACG  N/A  Click
15 479434..479832  PHAGE_Strept_phiSASD1: gp21; Krad_1724; phage(gi298103486)  6e-15  Click
16 479810..481573  PHAGE_Strept_R4: putative terminase; Krad_1723; phage(gi414089990)  2e-77  Click
17 481587..482963  PHAGE_Strept_R4: putative portal; Krad_1722; phage(gi414089991)  9e-58  Click
18 482964..483932  PHAGE_Strept_R4: hypothetical protein; Krad_1721; phage(gi414089992)  3e-18  Click
19 483961..484521  PHAGE_Strept_R4: putative scaffold protein; Krad_1720; phage(gi414089993)  9e-11  Click
20 484591..485520  PHAGE_Strept_R4: putative major capsid; Krad_1719; phage(gi414089994)  2e-36  Click
21 485551..486009  PHAGE_Mycoba_Faith1: gp9; Krad_1718; phage(gi338827021)  1e-06  Click
22 486006..486326  hypothetical protein; Krad_1717  N/A  Click
23 486326..486679  hypothetical protein; Krad_1716  N/A  Click
24 486676..487071  hypothetical protein; Krad_1715  N/A  Click
25 487132..487794  PHAGE_Gordon_GTE5: main tail protein; Krad_1714; phage(gi359802292)  2e-22  Click
26 487794..488090  hypothetical protein; Krad_1713  N/A  Click
27 488131..488457  hypothetical protein; Krad_1712  N/A  Click
28 488502..488885  PHAGE_Gordon_GTE5: tail assembly protein; Krad_1711; phage(gi359802293)  4e-05  Click
29 488905..494892  PHAGE_Strept_6: minor tail protein; Krad_1710; phage(gi93007453)  4e-60  Click
30 494892..495269  hypothetical protein; Krad_1709  N/A  Click
31 495271..496410  PHAGE_Bacill_PBC1: hypothetical protein; Krad_1708; phage(gi389060341)  9e-24  Click
32 496603..497118  hypothetical protein; Krad_1707  N/A  Click
33 497115..497552  alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Krad_1706  N/A  Click
34 497563..499209  PHAGE_Bacill_PBC1: putative YD repeat protein; Krad_1705; phage(gi389060340)  7e-44  Click
35 499235..499999  hypothetical protein; Krad_1704  N/A  Click
36 500013..501284  PHAGE_Salini_CW02: putative tail fiber; Krad_1703; phage(gi423261944)  9e-09  Click
37 501281..502348  hypothetical protein; Krad_1702  N/A  Click
38 502414..502824  hypothetical protein; Krad_1701  N/A  Click
39 503051..503491  hypothetical protein; Krad_1700  N/A  Click
40 503491..504222  PHAGE_Rhodoc_RRH1: putative lysin; Krad_1699; phage(gi372449805)  5e-05  Click
41 504225..504452  hypothetical protein; Krad_1698  N/A  Click
42 504433..505572  ECF family RNA polymerase sigma-24 subunit; Krad_1697  N/A  Click
43 complement(505276..506133)  hypothetical protein; Krad_1696  N/A  Click
44 complement(506441..507061)  hypothetical protein; Krad_1695  N/A  Click
45 complement(507242..507520)  hypothetical protein; Krad_1694  N/A  Click
46 complement(507527..507754)  hypothetical protein; Krad_1693  N/A  Click
47 complement(507772..508617)  PHAGE_Deep_s_D6E: structure protein; Krad_1692; phage(gi423262348)  5e-10  Click
48 508544..508555  attR    CCGAGGACGACG  N/A  Click
49 complement(508767..509975)  PHAGE_Mycoba_Angelica: gp41; Krad_1691; phage(gi304360798)  1e-58  Click
Region 3, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2327200..2327526)  PHAGE_Marseillevirus: thioredoxin; Krad_4504; phage(gi284504347)  2e-09  Click
2 complement(2327553..2328593)  PHAGE_Lactoc_949: putative ribonucleotide diphosphate reductase alpha subunit; Krad_4503; phage(gi327197952)  3e-19  Click
3 complement(2328712..2329494)  hypothetical protein; Krad_4502  N/A  Click
4 complement(2329865..2330467)  ECF family RNA polymerase sigma-24 subunit; Krad_4501  N/A  Click
5 complement(2330464..2332065)  PHAGE_Macaci_1: envelope glycoprotein G; Krad_4500; phage(gi30984491)  3e-06  Click
6 complement(2332251..2333348)  PHAGE_Macaci_1: ubiquitin E3 ligase ICP0; Krad_4499; phage(gi110007339)  7e-05  Click
7 complement(2333385..2334581)  PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; Krad_4498; phage(gi169257320)  3e-19  Click
8 2334654..2336366  PHAGE_Lactob_KC5a: putative minor tail protein; Krad_4497; phage(gi90592623)  4e-06  Click
9 complement(2336343..2338496)  PHAGE_Ictalu_1: ORF50; Krad_4496; phage(gi9626871)  2e-06  Click
10 complement(2338508..2338984)  PHAGE_Shigel_SP18: nudix hydrolase; Krad_4495; phage(gi308814478)  4e-05  Click
11 2339017..2340543  PHAGE_Mycoba_Myrna: gp28; Krad_4494; phage(gi203454630)  4e-52  Click
12 2340716..2341474  hypothetical protein; Krad_4493  N/A  Click
13 complement(2341538..2342236)  type IV pilus assembly PilZ; Krad_4492  N/A  Click
14 2342415..2343023  hypothetical protein; Krad_4491  N/A  Click
15 complement(2343039..2343443)  PHAGE_Helico_SNPV: ORF53; Krad_4490; phage(gi18138380)  8e-07  Click
16 complement(2343483..2345093)  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; Krad_4489; phage(gi163932195)  2e-08  Click