Definition Haemophilus influenzae PittGG chromosome, complete genome.
Accession NC_009567
Length 1,887,192
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 7237..7250  attL    AAAAGGAAATAAAA  N/A  Click
2 9247..9567  PHAGE_Mannhe_phiMHaA1: integrase; CGSHiGG_00065; phage(gi109289985)  1e-19  Click
3 complement(9557..9928)  hypothetical protein; CGSHiGG_00070  N/A  Click
4 10056..10226  PHAGE_Mannhe_phiMHaA1: integrase; CGSHiGG_00075; phage(gi109289985)  1e-14  Click
5 complement(10165..10689)  PHAGE_Haemop_HP2: rep; CGSHiGG_00080; phage(gi17981825)  3e-24  Click
6 10689..10922  PHAGE_Haemop_SuMu: portal protein gp29; CGSHiGG_00085; phage(gi418489080)  3e-22  Click
7 10934..11635  PHAGE_Haemop_SuMu: MuF; CGSHiGG_00090; phage(gi418489084)  3e-79  Click
8 11771..12187  PHAGE_Haemop_SuMu: Mu-like prophage protein gpG; CGSHiGG_00095; phage(gi418489082)  2e-45  Click
9 complement(12561..13358)  lic-1 operon protein; CGSHiGG_00100  N/A  Click
10 complement(13358..14059)  lic-1 operon protein; CGSHiGG_00105  N/A  Click
11 complement(14056..14934)  lic-1 operon protein; CGSHiGG_00110  N/A  Click
12 complement(14934..15914)  PHAGE_Megavi_chiliensis: putative BTB/POZ domain-containing protein; CGSHiGG_00115; phage(gi363540422)  8e-05  Click
13 22293..22306  attR    AAAAGGAAATAAAA  N/A  Click
Region 2, total : 37 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 142670..142681  attL    CGGCAAAATCTG  N/A  Click
2 complement(147834..148934)  PHAGE_Aggreg_S1249: hypothetical protein; CGSHiGG_00790; phage(gi273809565)  6e-172  Click
3 complement(149075..150358)  PHAGE_Aggreg_S1249: putative minor head protein; CGSHiGG_00795; phage(gi273809568)  1e-87  Click
4 complement(151863..152963)  PHAGE_Vibrio_pYD21_A: terminase large subunit; CGSHiGG_00810; phage(gi472340505)  1e-83  Click
5 complement(152950..153465)  PHAGE_Acinet_AP22: putative phage terminase small subunit; CGSHiGG_00815; phage(gi388570782)  8e-23  Click
6 153510..153788  hypothetical protein; CGSHiGG_00820  N/A  Click
7 complement(153790..154071)  PHAGE_Aggreg_S1249: putative lytic protein Rz1; CGSHiGG_00825; phage(gi273809573)  1e-27  Click
8 complement(154157..154306)  hypothetical protein; CGSHiGG_00830  N/A  Click
9 complement(154299..154892)  PHAGE_Aggreg_S1249: putative Lys protein; CGSHiGG_00835; phage(gi273809575)  8e-58  Click
10 complement(154870..155226)  PHAGE_Aeromo_phiO18P: putative holin; CGSHiGG_00840; phage(gi148727161)  1e-05  Click
11 complement(155449..156303)  PHAGE_Aggreg_S1249: putative antirepressor protein Ant; CGSHiGG_00845; phage(gi273809579)  5e-60  Click
12 complement(156616..157074)  hypothetical protein; CGSHiGG_00850  N/A  Click
13 complement(157184..157723)  hypothetical protein; CGSHiGG_00855  N/A  Click
14 complement(157901..158269)  PHAGE_Aggreg_S1249: putative anti-termination protein Q; CGSHiGG_00860; phage(gi273809580)  2e-38  Click
15 complement(158332..158913)  PHAGE_Thalas_BA3: hypothetical protein BA3_0046; CGSHiGG_00865; phage(gi160700640)  2e-27  Click
16 complement(158960..159526)  PHAGE_Aggreg_S1249: NinG recombination protein; CGSHiGG_00870; phage(gi273809581)  1e-37  Click
17 complement(159526..159618)  hypothetical protein; CGSHiGG_00875  N/A  Click
18 complement(159615..159983)  PHAGE_Aggreg_S1249: putative recombination protein NinB; CGSHiGG_00880; phage(gi273809585)  6e-42  Click
19 complement(160070..160294)  hypothetical protein; CGSHiGG_00885  N/A  Click
20 complement(160281..160931)  PHAGE_Aggreg_S1249: possible bacteriophage replication protein P; CGSHiGG_00890; phage(gi273809587)  3e-39  Click
21 complement(160928..161674)  PHAGE_Aggreg_S1249: replication protein; CGSHiGG_00895; phage(gi273809588)  2e-73  Click
22 complement(161671..162339)  PHAGE_Aggreg_S1249: uncharacterized phage-encoded protein; CGSHiGG_00900; phage(gi273809589)  2e-59  Click
23 complement(162386..162733)  PHAGE_Entero_mEp390: hypothetical protein; CGSHiGG_00905; phage(gi428782704)  4e-09  Click
24 complement(162751..162825)  hypothetical protein; CGSHiGG_00910  N/A  Click
25 complement(162874..163062)  PHAGE_Aggreg_S1249: phage protein; CGSHiGG_00915; phage(gi273809591)  6e-05  Click
26 163231..163872  PHAGE_Haemop_Aaphi23: putative CI protein; CGSHiGG_00920; phage(gi31544010)  9e-109  Click
27 163927..165009  PHAGE_Entero_P4: hypothetical protein P4p02; CGSHiGG_00925; phage(gi9627509)  5e-39  Click
28 complement(164936..165592)  PHAGE_Entero_P4: hypothetical protein P4p03; CGSHiGG_00930; phage(gi9627510)  4e-19  Click
29 complement(166026..166196)  hypothetical protein; CGSHiGG_00935  N/A  Click
30 166211..166432  hypothetical protein; CGSHiGG_00940  N/A  Click
31 166600..166920  hypothetical protein; CGSHiGG_00945  N/A  Click
32 complement(166898..167101)  hypothetical protein; CGSHiGG_00950  N/A  Click
33 167702..167947  hypothetical protein; CGSHiGG_00955  N/A  Click
34 168003..168974  PHAGE_Bacill_BMBtp2: phage minor structural protein; CGSHiGG_00960; phage(gi431809466)  1e-05  Click
35 169312..169563  PHAGE_Escher_TL_2011c: putative antirepressor; CGSHiGG_00965; phage(gi418487055)  3e-18  Click
36 169708..169827  hypothetical protein; CGSHiGG_00970  N/A  Click
37 169788..169799  attR    CGGCAAAATCTG  N/A  Click
38 169869..170156  hypothetical protein; CGSHiGG_00975  N/A  Click
39 complement(170153..170812)  PHAGE_Mannhe_phiMHaA1: integrase; CGSHiGG_00980; phage(gi109289985)  4e-50  Click
Region 3, total : 66 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 868570..868582  attL    CGTGCGGAAAAAT  N/A  Click
2 complement(880367..880825)  PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; CGSHiGG_04715; phage(gi418489075)  4e-47  Click
3 complement(880822..881421)  PHAGE_Haemop_HP2: tail collar; CGSHiGG_04720; phage(gi17981848)  2e-101  Click
4 complement(883508..884122)  PHAGE_Pseudo_PaP1: hypothetical protein; CGSHiGG_04735; phage(gi431809586)  8e-21  Click
5 complement(884131..885567)  PHAGE_Erwini_phiEt88: baseplate component; CGSHiGG_04740; phage(gi327198583)  2e-47  Click
6 complement(885560..885925)  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; CGSHiGG_04745; phage(gi431810001)  2e-12  Click
7 complement(885922..886593)  PHAGE_Erwini_phiEt88: phage baseplate assembly protein V; CGSHiGG_04750; phage(gi327198581)  9e-22  Click
8 complement(886596..887552)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04755; phage(gi327198580)  8e-34  Click
9 complement(887549..887863)  PHAGE_Pseudo_KPP10: hypothetical protein; CGSHiGG_04760; phage(gi327198192)  7e-05  Click
10 complement(887860..888441)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04765; phage(gi327198578)  1e-14  Click
11 complement(888532..890862)  PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; CGSHiGG_04770; phage(gi428782128)  2e-40  Click
12 complement(890859..891011)  hypothetical protein; CGSHiGG_04775  N/A  Click
13 complement(891047..891529)  hypothetical protein; CGSHiGG_04780  N/A  Click
14 complement(891516..891953)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04785; phage(gi327198575)  8e-17  Click
15 complement(891999..893072)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04790; phage(gi327198574)  1e-50  Click
16 complement(893059..893568)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04795; phage(gi327198573)  7e-05  Click
17 complement(893570..893929)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04800; phage(gi327198572)  3e-09  Click
18 complement(893929..894387)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04805; phage(gi327198571)  3e-17  Click
19 complement(894433..894729)  hypothetical protein; CGSHiGG_04810  N/A  Click
20 complement(894733..894921)  hypothetical protein; CGSHiGG_04815  N/A  Click
21 complement(894924..895871)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04820; phage(gi327198568)  4e-45  Click
22 complement(895933..896352)  PHAGE_Xantho_vB_XveM_DIBBI: hypothetical protein; CGSHiGG_04825; phage(gi389060408)  4e-08  Click
23 complement(896365..897438)  PHAGE_Erwini_phiEt88: hypothetical protein; CGSHiGG_04830; phage(gi327198566)  3e-60  Click
24 complement(897564..898781)  PHAGE_Erwini_phiEt88: phage putative head morphogenesis protein; CGSHiGG_04835; phage(gi327198565)  1e-24  Click
25 complement(898762..900078)  PHAGE_Erwini_phiEt88: portal protein; CGSHiGG_04840; phage(gi327198564)  6e-43  Click
26 complement(900080..901429)  PHAGE_Entero_Sf6: gene 2 protein; CGSHiGG_04845; phage(gi41057280)  8e-118  Click
27 complement(901410..901778)  PHAGE_Lactob_Lj771: small terminase subunit; CGSHiGG_04850; phage(gi163932180)  5e-13  Click
28 901836..902057  hypothetical protein; CGSHiGG_04855  N/A  Click
29 complement(902054..903409)  PHAGE_Entero_phiFL3A: DNA adenine methyltransferase; CGSHiGG_04860; phage(gi281416249)  1e-79  Click
30 complement(903421..903651)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_35; CGSHiGG_04865; phage(gi148727163)  8e-06  Click
31 complement(903626..904015)  hypothetical protein; CGSHiGG_04870  N/A  Click
32 complement(904012..904416)  PHAGE_Entero_RB49: hypothetical protein RB49p102; CGSHiGG_04875; phage(gi33620489)  3e-29  Click
33 complement(904403..904570)  hypothetical protein; CGSHiGG_04880  N/A  Click
34 complement(904922..905692)  PHAGE_Mannhe_phiMHaA1: CI repressor; CGSHiGG_04885; phage(gi109289970)  1e-18  Click
35 905817..906023  PHAGE_Mannhe_phiMHaA1: Cro repressor; CGSHiGG_04890; phage(gi109289971)  1e-10  Click
36 906565..906798  PHAGE_Sulfit_pCB2047_C: hypothetical protein; CGSHiGG_04895; phage(gi472341794)  3e-07  Click
37 906800..907582  PHAGE_Aggreg_S1249: replication protein; CGSHiGG_04900; phage(gi273809588)  2e-44  Click
38 908200..908424  hypothetical protein; CGSHiGG_04915  N/A  Click
39 908461..908877  PHAGE_Aggreg_S1249: putative recombination protein NinB; CGSHiGG_04920; phage(gi273809585)  1e-64  Click
40 908878..908970  hypothetical protein; CGSHiGG_04925  N/A  Click
41 908970..909581  PHAGE_Salmon_SPN3UB: NinG; CGSHiGG_04930; phage(gi423262439)  1e-38  Click
42 909560..909925  PHAGE_Haemop_Aaphi23: putative anti-termination protein Q; CGSHiGG_04935; phage(gi31544020)  4e-05  Click
43 910048..910848  PHAGE_Haemop_HP2: hypothetical protein HP2p02; CGSHiGG_04940; phage(gi17981817)  2e-09  Click
44 910859..912007  hypothetical protein; CGSHiGG_04945  N/A  Click
45 912157..912342  hypothetical protein; CGSHiGG_04950  N/A  Click
46 912732..913043  hypothetical protein; CGSHiGG_04955  N/A  Click
47 913163..913414  PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; CGSHiGG_04960; phage(gi399528947)  5e-13  Click
48 913404..914435  PHAGE_Aggreg_S1249: putative antirepressor protein Ant; CGSHiGG_04965; phage(gi273809579)  7e-44  Click
49 914526..915257  PHAGE_Lactoc_Tuc2009: putative methylase; CGSHiGG_04970; phage(gi13487817)  3e-106  Click
50 915278..915622  hypothetical protein; CGSHiGG_04975  N/A  Click
51 915619..915912  hypothetical protein; CGSHiGG_04980  N/A  Click
52 915925..916845  PHAGE_Psychr_pOW20_A: recombinase; CGSHiGG_04985; phage(gi472339794)  3e-57  Click
53 916820..917470  PHAGE_Psychr_pOW20_A: hypothetical protein; CGSHiGG_04990; phage(gi472339793)  4e-43  Click
54 917470..917904  PHAGE_Vibrio_VvAW1: single-stranded DNA-binding protein; CGSHiGG_04995; phage(gi460042909)  3e-22  Click
55 917967..918746  PHAGE_Entero_ES18: gp53; CGSHiGG_05000; phage(gi62362266)  3e-77  Click
56 918852..919763  PHAGE_Vibrio_VHML: ORF10; CGSHiGG_05005; phage(gi27311176)  4e-53  Click
57 919760..920005  hypothetical protein; CGSHiGG_05010  N/A  Click
58 920002..920361  hypothetical protein; CGSHiGG_05015  N/A  Click
59 920369..921643  PHAGE_Entero_P1: Dmt; CGSHiGG_05020; phage(gi46401691)  7e-78  Click
60 921694..922215  hypothetical protein; CGSHiGG_05025  N/A  Click
61 922269..922346  hypothetical protein; CGSHiGG_05030  N/A  Click
62 922350..922766  PHAGE_Acinet_Ac42: Arn.3 conserved hypothetical protein; CGSHiGG_05035; phage(gi311992576)  2e-10  Click
63 922838..923371  hypothetical protein; CGSHiGG_05040  N/A  Click
64 923361..923684  hypothetical protein; CGSHiGG_05045  N/A  Click
65 923677..924021  hypothetical protein; CGSHiGG_05050  N/A  Click
66 924073..924387  hypothetical protein; CGSHiGG_05055  N/A  Click
67 924132..924144  attR    CGTGCGGAAAAAT  N/A  Click
68 924429..925310  PHAGE_Burkho_phiE202: gp10, site-specific recombinase, phage integrase family; CGSHiGG_05060; phage(gi134288747)  7e-45  Click