| Definition | Yersinia pestis Pestoides F, complete genome. |
|---|---|
| Accession | NC_009381 |
| Length | 4,517,345 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 275367..275972 | PHAGE_Acinet_Ac42: hypothetical protein; YPDSF_0245; phage(gi311992578) | 7e-19 | Click |
| 2 | complement(276162..277016) | putative glutathione S-transferase YghU; YPDSF_0246 | N/A | Click |
| 3 | 277267..278613 | hypothetical protein; YPDSF_0247 | N/A | Click |
| 4 | complement(278720..279895) | PHAGE_Clostr_phiCD38_2: tail tape measure; YPDSF_0248; phage(gi333798123) | 7e-05 | Click |
| 5 | 280300..280758 | PHAGE_Hypert_2: IS element Dka2 orfA; YPDSF_0249; phage(gi300116744) | 4e-15 | Click |
| 6 | complement(280941..281153) | PHAGE_Lactoc_bIL312: Csp; YPDSF_0250; phage(gi13095918) | 4e-17 | Click |
| 7 | complement(281413..281625) | PHAGE_Lactoc_bIL312: Csp; YPDSF_0251; phage(gi13095918) | 3e-17 | Click |
| 8 | 281870..282067 | hypothetical protein; YPDSF_0252 | N/A | Click |
| 9 | complement(282158..282625) | PHAGE_Escher_TL_2011b: putative outer membrane lipoprotein; YPDSF_0253; phage(gi418487638) | 2e-08 | Click |
| 10 | 283101..283913 | hypothetical protein; YPDSF_0254 | N/A | Click |
| 11 | 283978..284868 | PHAGE_Synech_S_SM1: 6-phosphogluconate dehydrogenase; YPDSF_0255; phage(gi326782617) | 5e-11 | Click |
| 12 | 285046..285441 | gamma carboxymuconolactone decarboxylase; YPDSF_0256 | N/A | Click |
| 13 | 285595..286959 | PHAGE_Burkho_phi1026b: gp59; YPDSF_0257; phage(gi38707949) | 1e-21 | Click |
| 14 | 287049..287711 | PHAGE_Strept_phiC31: gp26; YPDSF_0258; phage(gi40807292) | 3e-05 | Click |
Region 2, total : 42 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1131740..1132159) | PHAGE_Bacter_2: tail fiber; YPDSF_0997; phage(gi212499733) | 2e-10 | Click |
| 2 | complement(1132170..1133087) | PHAGE_Salmon_SSU5: putative phage tail fiber protein; YPDSF_0998; phage(gi410491431) | 2e-09 | Click |
| 3 | complement(1133104..1134117) | PHAGE_Cronob_phiES15: hypothetical protein; YPDSF_0999; phage(gi401817612) | 7e-25 | Click |
| 4 | complement(1134102..1137305) | PHAGE_Cronob_phiES15: putative host specificity protein; YPDSF_1000; phage(gi401817611) | 0.0 | Click |
| 5 | complement(1137877..1138497) | PHAGE_Entero_mEpX2: tail assembly protein; YPDSF_1001; phage(gi428765633) | 9e-66 | Click |
| 6 | complement(1138911..1139462) | PHAGE_Cronob_phiES15: hypothetical protein; YPDSF_1002; phage(gi401817606) | 5e-08 | Click |
| 7 | 1139062..1139074 | attL ATTTCCATAACTG | N/A | Click |
| 8 | complement(1139561..1140568) | PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; YPDSF_1003; phage(gi31544021) | 4e-37 | Click |
| 9 | 1140825..1141364 | PHAGE_Escher_TL_2011b: hypothetical protein; YPDSF_1004; phage(gi418487671) | 3e-32 | Click |
| 10 | complement(1141443..1141634) | hypothetical protein; YPDSF_1005 | N/A | Click |
| 11 | complement(1142347..1143057) | PHAGE_Entero_HK140: minor tail protein K; YPDSF_1006; phage(gi428781957) | 8e-109 | Click |
| 12 | complement(1143060..1143812) | PHAGE_Entero_HK225: minor tail protein; YPDSF_1007; phage(gi428782393) | 3e-101 | Click |
| 13 | complement(1143932..1144390) | PROPHAGE_Salmon_Ty2: transposase; YPDSF_1008; phage(gi29143766) | 3e-85 | Click |
| 14 | complement(1144642..1145100) | PROPHAGE_Salmon_Ty2: transposase; YPDSF_1009; phage(gi29143766) | 5e-84 | Click |
| 15 | complement(1145406..1145747) | PHAGE_Cronob_phiES15: putative minor tail protein; YPDSF_1010; phage(gi401817607) | 2e-31 | Click |
| 16 | complement(1145750..1149265) | PHAGE_Entero_mEp213: tail length tape measure protein; YPDSF_1011; phage(gi428782602) | 5e-152 | Click |
| 17 | complement(1149574..1149885) | PHAGE_Cronob_phiES15: hypothetical protein; YPDSF_1012; phage(gi401817603) | 9e-32 | Click |
| 18 | complement(1149898..1150818) | PHAGE_Cronob_phiES15: putative major tail protein; YPDSF_1013; phage(gi401817602) | 3e-75 | Click |
| 19 | complement(1150884..1151291) | PHAGE_Cronob_phiES15: hypothetical protein; YPDSF_1014; phage(gi401817601) | 1e-16 | Click |
| 20 | complement(1151288..1151872) | PHAGE_Shigel_EP23: putative tail protein; YPDSF_1015; phage(gi371496282) | 2e-27 | Click |
| 21 | complement(1151874..1152170) | PHAGE_Cronob_phiES15: putative structural protein 2; YPDSF_1016; phage(gi401817599) | 6e-25 | Click |
| 22 | complement(1152227..1152481) | PHAGE_Salmon_SSU5: hypothetical protein; YPDSF_1017; phage(gi410491538) | 8e-20 | Click |
| 23 | complement(1152478..1153008) | PHAGE_Cronob_phiES15: hypothetical protein; YPDSF_1018; phage(gi401817598) | 3e-23 | Click |
| 24 | complement(1153008..1154213) | PHAGE_Acinet_Bphi_B1251: major capsid protein; YPDSF_1019; phage(gi423262007) | 1e-113 | Click |
| 25 | complement(1154227..1155000) | PHAGE_Xantho_Xp15: putative phage structural protein; YPDSF_1020; phage(gi66392059) | 1e-19 | Click |
| 26 | complement(1155122..1156234) | PHAGE_Cronob_phiES15: hypothetical protein; YPDSF_1021; phage(gi401817594) | 3e-123 | Click |
| 27 | complement(1156235..1156876) | PHAGE_Burkho_KL1: portal protein; YPDSF_1022; phage(gi399528722) | 1e-34 | Click |
| 28 | complement(1156895..1157623) | PHAGE_Burkho_KL1: portal protein; YPDSF_1023; phage(gi399528722) | 2e-35 | Click |
| 29 | complement(1157623..1159113) | PHAGE_Cronob_phiES15: terminase large subunit; YPDSF_1024; phage(gi401817592) | 0.0 | Click |
| 30 | complement(1159123..1159572) | PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; YPDSF_1025; phage(gi399528759) | 4e-51 | Click |
| 31 | complement(1159603..1160238) | PHAGE_Pectob_ZF40: putative transposase; YPDSF_1026; phage(gi422936679) | 3e-87 | Click |
| 32 | complement(1160695..1161408) | PHAGE_Cronob_ENT47670: phage antirepressor protein; YPDSF_1027; phage(gi431810509) | 6e-50 | Click |
| 33 | complement(1161954..1162412) | PHAGE_Entero_cdtI: lysin; YPDSF_1028; phage(gi148609441) | 2e-24 | Click |
| 34 | complement(1162397..1162909) | PHAGE_Cronob_phiES15: putative endolysin; YPDSF_1029; phage(gi401817587) | 2e-51 | Click |
| 35 | complement(1163655..1163828) | hypothetical protein; YPDSF_1030 | N/A | Click |
| 36 | complement(1164288..1164851) | PHAGE_Salmon_SPN3UB: hypothetical protein; YPDSF_1031; phage(gi423262398) | 1e-29 | Click |
| 37 | complement(1165122..1165511) | PHAGE_Entero_2008: antitermination protein Q; YPDSF_1032; phage(gi209427762) | 2e-44 | Click |
| 38 | complement(1165512..1166117) | PHAGE_Salmon_ST160: NinG; YPDSF_1033; phage(gi318065938) | 4e-43 | Click |
| 39 | complement(1166191..1166637) | PHAGE_Cronob_ENT47670: putative ninB protein; YPDSF_1034; phage(gi431810524) | 5e-47 | Click |
| 40 | 1166718..1167362 | PHAGE_Pseudo_F116: DNA adenine methyltransferase; YPDSF_1035; phage(gi56692911) | 4e-43 | Click |
| 41 | complement(1168090..1168869) | PROPHAGE_Escher_CFT073: transposase/IS protein; YPDSF_1036; phage(gi26248359) | 1e-142 | Click |
| 42 | complement(1168869..1169891) | PROPHAGE_Escher_CFT073: transposase; YPDSF_1037; phage(gi26248360) | 0.0 | Click |
| 43 | 1169863..1169875 | attR ATTTCCATAACTG | N/A | Click |
| 44 | 1169961..1171199 | PHAGE_Salmon_1: putative bacteriophage integrase; YPDSF_1038; phage(gi169257156) | 1e-125 | Click |
Region 3, total : 18 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1395640..1395652 | attL CCTAAAAAAAACA | N/A | Click |
| 2 | complement(1408577..1408783) | PHAGE_Entero_Sf6: putative transposase OrfB; YPDSF_1239; phage(gi41057343) | 1e-22 | Click |
| 3 | 1409201..1409635 | hypothetical protein; YPDSF_1240 | N/A | Click |
| 4 | 1409647..1410216 | hypothetical protein; YPDSF_1241 | N/A | Click |
| 5 | complement(1410634..1410972) | PROPHAGE_Escher_CFT073: transposase; YPDSF_1242; phage(gi26246249) | 2e-56 | Click |
| 6 | complement(1410972..1411832) | PROPHAGE_Escher_CFT073: transposase; YPDSF_1243; phage(gi26246249) | 3e-139 | Click |
| 7 | complement(1411880..1412956) | hypothetical protein; YPDSF_1244 | N/A | Click |
| 8 | complement(1413022..1413312) | PHAGE_Burkho_phiE202: gp7, pANL12; YPDSF_1245; phage(gi134288781) | 3e-07 | Click |
| 9 | complement(1413293..1413565) | PHAGE_Burkho_phiE202: gp6, pANL56; YPDSF_1246; phage(gi134288760) | 2e-12 | Click |
| 10 | 1413696..1413950 | PHAGE_Entero_PsP3: gp15; YPDSF_1247; phage(gi41057367) | 9e-19 | Click |
| 11 | 1413947..1414246 | PHAGE_Entero_PsP3: gp16; YPDSF_1248; phage(gi41057368) | 8e-25 | Click |
| 12 | 1414263..1414550 | PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber protein; YPDSF_1249; phage(gi422937565) | 7e-06 | Click |
| 13 | 1414985..1415200 | membrane protein; YPDSF_1250 | N/A | Click |
| 14 | 1415197..1415502 | hypothetical protein; YPDSF_1251 | N/A | Click |
| 15 | 1416177..1416596 | hypothetical protein; YPDSF_1253 | N/A | Click |
| 16 | 1416668..1417627 | PHAGE_Lactob_phiAT3: putative transposase B; YPDSF_1254; phage(gi48697274) | 6e-15 | Click |
| 17 | 1417847..1418191 | hypothetical protein; YPDSF_1255 | N/A | Click |
| 18 | complement(1418773..1418946) | hypothetical protein; YPDSF_1256 | N/A | Click |
| 19 | 1420002..1420559 | PHAGE_Pectob_ZF40: putative integrase; YPDSF_1258; phage(gi422936642) | 1e-69 | Click |
| 20 | 1424815..1424827 | attR CCTAAAAAAAACA | N/A | Click |
Region 4, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2781533..2782273) | PHAGE_Acanth_moumouvirus: putative glucosamine-fructose-6-phosphate aminotransferase; YPDSF_2440; phage(gi441432573) | 3e-05 | Click |
| 2 | complement(2782571..2783350) | PHAGE_Entero_HK97: tail fiber; YPDSF_2441; phage(gi9634179) | 8e-54 | Click |
| 3 | complement(2783447..2783851) | PHAGE_Entero_SfV: tail protein; YPDSF_2442; phage(gi19548988) | 4e-11 | Click |
| 4 | complement(2783791..2784051) | PHAGE_Salmon_ST64B: putative tail protein; YPDSF_2443; phage(gi23505467) | 5e-05 | Click |
| 5 | complement(2784048..2785184) | PHAGE_Entero_SfV: tail protein; YPDSF_2444; phage(gi19549009) | 8e-33 | Click |
| 6 | complement(2785188..2785643) | PHAGE_Entero_SfV: tail protein; YPDSF_2445; phage(gi19549008) | 5e-14 | Click |
| 7 | complement(2785640..2786044) | PHAGE_Entero_SfV: tail protein; YPDSF_2446; phage(gi19549007) | 1e-12 | Click |
| 8 | complement(2786253..2787308) | PHAGE_Entero_SfV: tail protein; YPDSF_2447; phage(gi19549006) | 3e-32 | Click |
| 9 | complement(2787305..2788711) | PHAGE_Entero_SfV: tail/DNA circulation protein; YPDSF_2448; phage(gi19549005) | 3e-20 | Click |
| 10 | complement(2788978..2790471) | bacteriophage coat protein; YPDSF_2449 | N/A | Click |
| 11 | complement(2790592..2790891) | hypothetical protein; YPDSF_2450 | N/A | Click |
| 12 | 2790845..2791249 | hypothetical protein; YPDSF_2451 | N/A | Click |
| 13 | complement(2790893..2791261) | PHAGE_Entero_SfV: hypothetical protein SfVp12; YPDSF_2452; phage(gi19549002) | 2e-10 | Click |
| 14 | complement(2791283..2792791) | PHAGE_Entero_SfV: tail sheath protein; YPDSF_2453; phage(gi19549001) | 4e-107 | Click |
| 15 | complement(2792788..2792982) | PHAGE_Entero_SfV: hypothetical protein SfVp10; YPDSF_2454; phage(gi19549000) | 1e-06 | Click |
| 16 | complement(2792987..2793604) | ATP-binding protein; YPDSF_2455 | N/A | Click |
| 17 | complement(2793650..2793940) | PHAGE_Salmon_SPN3UB: hypothetical protein; YPDSF_2456; phage(gi423262443) | 7e-16 | Click |