Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 46 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1635572..1635650  attL    GATTTAAAATCCCTCGACGTTCGCGTCGTGCCGGTTCGATTCCGGCCTCGGGCACCATTAAAATCAAAGACTTACGAAG  N/A  Click
2 complement(1637749..1638768)  PROPHAGE_Neisse_MC58: IS30 family transposase; ASA_1564; phage(gi15677611)  8e-63  Click
3 complement(1638740..1639771)  PHAGE_Campyl_CP21: putative phospholipase; ASA_1565; phage(gi422935151)  1e-14  Click
4 1640004..1640540  hypothetical protein; ASA_1566  N/A  Click
5 complement(1640566..1642179)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; ASA_1567; phage(gi148727175)  0.0  Click
6 complement(1642176..1642667)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; ASA_1568; phage(gi148727174)  1e-75  Click
7 complement(1642715..1643596)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_44; ASA_1569; phage(gi148727173)  2e-128  Click
8 complement(1643593..1644018)  PHAGE_Aeromo_phiO18P: putative tail fiber assembly protein; ASA_1570; phage(gi148727172)  2e-32  Click
9 complement(1644034..1646124)  PHAGE_Aeromo_phiO18P: putative tail fiber protein; ASA_1571; phage(gi158518662)  0.0  Click
10 complement(1646121..1646723)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; ASA_1572; phage(gi148727169)  8e-106  Click
11 complement(1646716..1647876)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; ASA_1573; phage(gi148727168)  0.0  Click
12 complement(1647900..1648238)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; ASA_1574; phage(gi148727167)  4e-53  Click
13 complement(1648238..1650289)  PHAGE_Aeromo_phiO18P: putative tail tape measure protein; ASA_1575; phage(gi148727166)  0.0  Click
14 complement(1650484..1650747)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; ASA_1576; phage(gi148727164)  9e-27  Click
15 complement(1650744..1651043)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_35; ASA_1577; phage(gi148727163)  3e-47  Click
16 complement(1650871..1651305)  hypothetical protein; ASA_1578  N/A  Click
17 complement(1651302..1651763)  PHAGE_Aeromo_phiO18P: putative muramidase; ASA_1579; phage(gi148727162)  3e-72  Click
18 complement(1651750..1652085)  PHAGE_Aeromo_phiO18P: putative holin; ASA_1580; phage(gi148727161)  1e-29  Click
19 complement(1652100..1652309)  PHAGE_Aeromo_phiO18P: putative zinc finger protein; ASA_1581; phage(gi148727160)  3e-28  Click
20 complement(1652319..1652774)  PHAGE_Aeromo_phiO18P: putative tail tube protein; ASA_1582; phage(gi148727159)  3e-76  Click
21 complement(1652778..1653914)  PHAGE_Aeromo_phiO18P: putative tail sheath protein; ASA_1583; phage(gi148727158)  0.0  Click
22 complement(1653919..1654605)  PHAGE_Aeromo_phiO18P: putative tail completion protein; ASA_1584; phage(gi148727157)  2e-107  Click
23 complement(1654608..1655126)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; ASA_1585; phage(gi148727156)  3e-89  Click
24 complement(1655123..1655584)  PHAGE_Aeromo_phiO18P: putative head completion protein; ASA_1586; phage(gi148727155)  2e-71  Click
25 complement(1655700..1656428)  PHAGE_Aeromo_phiO18P: putative terminase small subunit; ASA_1587; phage(gi148727154)  1e-132  Click
26 complement(1656432..1657484)  PHAGE_Aeromo_phiO18P: putative major capsid protein; ASA_1588; phage(gi148727153)  4e-173  Click
27 complement(1657494..1658366)  PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; ASA_1589; phage(gi148727152)  3e-120  Click
28 1658544..1660364  PHAGE_Aeromo_phiO18P: putative terminase large subunit; ASA_1590; phage(gi148727151)  0.0  Click
29 1660361..1661377  PHAGE_Aeromo_phiO18P: putative portal protein; ASA_1591; phage(gi148727149)  0.0  Click
30 1661443..1661694  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; ASA_1592; phage(gi148727148)  2e-39  Click
31 complement(1661837..1662880)  hypothetical protein; ASA_1593  N/A  Click
32 complement(1662978..1663667)  hypothetical protein; ASA_1594  N/A  Click
33 complement(1663870..1666143)  PHAGE_Aeromo_phiO18P: putative replication protein; ASA_1595; phage(gi148727142)  0.0  Click
34 complement(1666140..1666397)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_12; ASA_1596; phage(gi148727141)  2e-13  Click
35 complement(1666394..1666699)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_11; ASA_1597; phage(gi148727140)  2e-30  Click
36 complement(1666696..1666965)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_10; ASA_1598; phage(gi148727139)  2e-27  Click
37 complement(1666962..1667225)  PHAGE_Yersin_413C: gpC; ASA_1599; phage(gi30065734)  5e-07  Click
38 complement(1667484..1667936)  PHAGE_Aeromo_phiO18P: hypothetical protein phio18_7; ASA_1600; phage(gi148727136)  1e-64  Click
39 complement(1667953..1668474)  PHAGE_Aeromo_phiO18P: putative cII protein; ASA_1601; phage(gi148727135)  1e-63  Click
40 complement(1668479..1668736)  PHAGE_Aeromo_phiO18P: putative cox protein; ASA_1602; phage(gi148727134)  1e-06  Click
41 complement(1668760..1668948)  PHAGE_Entero_mEp390: prophage anti-repressor; ASA_1603; phage(gi428782702)  6e-13  Click
42 1669050..1669733  PHAGE_Entero_mEp390: prophage repressor; ASA_1604; phage(gi428782701)  5e-23  Click
43 1669760..1671412  PHAGE_Entero_ES18: gp19; ASA_1605; phage(gi62362232)  1e-71  Click
44 1671623..1672678  PHAGE_Aeromo_phiO18P: putative integrase; ASA_1606; phage(gi148727179)  3e-110  Click
45 1672707..1673069  hypothetical protein; ASA_1607  N/A  Click
46 1673184..1673262  attR    GATTTAAAATCCCTCGACGTTCGCGTCGTGCCGGTTCGATTCCGGCCTCGGGCACCATTAAAATCAAAGACTTACGAAG  N/A  Click
47 complement(1673511..1674479)  PHAGE_Burkho_phi1026b: gp58; ASA_1608; phage(gi38707948)  7e-06  Click
48 1674587..1675360  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; ASA_1609; phage(gi116326757)  1e-22  Click
Region 2, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2139287..2139299  attL    ACCGAGTTGGCAC  N/A  Click
2 complement(2144346..2145101)  PROPHAGE_Escher_CFT073: transposase/IS protein; ASA_2016; phage(gi26248359)  5e-29  Click
3 complement(2145116..2146657)  PROPHAGE_Escher_CFT073: transposase; ASA_2017; phage(gi26248360)  9e-06  Click
4 complement(2147452..2147847)  PHAGE_Vibrio_VfO4K68: Vpf114; ASA_2018; phage(gi9635483)  6e-06  Click
5 complement(2147840..2148904)  PHAGE_Vibrio_VCY_phi: minor capsid protein; ASA_2019; phage(gi358356476)  1e-05  Click
6 2148972..2149313  hypothetical protein; ASA_2020  N/A  Click
7 complement(2149548..2149868)  hypothetical protein; ASA_2021  N/A  Click
8 complement(2149913..2150302)  hypothetical protein; ASA_2022  N/A  Click
9 complement(2150473..2151438)  PHAGE_Entero_If1: hypothetical protein If1p10; ASA_2023; phage(gi9630757)  2e-70  Click
10 2151568..2151756  phage protein; ASA_2024  N/A  Click
11 2151893..2152270  hypothetical protein; ASA_2025  N/A  Click
12 complement(2152318..2152701)  hypothetical protein; ASA_2026  N/A  Click
13 2153183..2153455  PHAGE_Burkho_2: gp24, hypothetical protein; ASA_2027; phage(gi134288718)  2e-13  Click
14 2153634..2153646  attR    ACCGAGTTGGCAC  N/A  Click
15 complement(2153762..2155039)  phage integrase; ASA_2028  N/A  Click
Region 3, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3320520..3320729  PHAGE_Stenot_S1: putative repressor protein; ASA_3077; phage(gi213163928)  2e-09  Click
2 3320741..3320992  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; ASA_3078; phage(gi148727148)  2e-16  Click
3 3321044..3321766  PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; ASA_3079; phage(gi148727152)  3e-44  Click
4 3321868..3322899  PROPHAGE_Escher_EDL933: putative transposase; ASA_3080; phage(gi15803522)  1e-89  Click
5 complement(3322959..3323999)  PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; ASA_3081; phage(gi160688404)  1e-07  Click
6 3324288..3325145  formate dehydrogenase accessory protein; ASA_3082  N/A  Click
7 3325149..3326027  hypothetical protein; ASA_3083  N/A  Click
8 complement(3326152..3328311)  PHAGE_Ectoca_1: EsV-1-14; ASA_3084; phage(gi13242486)  1e-06  Click
Region 4, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4120047..4121090  PHAGE_Campyl_CP30A: hypothetical protein; ASA_3828; phage(gi410493032)  3e-14  Click
2 4121087..4121623  hypothetical protein; ASA_3829  N/A  Click
3 complement(4121649..4123262)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; ASA_3830; phage(gi148727175)  0.0  Click
4 complement(4123259..4123750)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; ASA_3831; phage(gi148727174)  1e-75  Click
5 complement(4123798..4124679)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_44; ASA_3832; phage(gi148727173)  2e-129  Click
6 complement(4124676..4125101)  PHAGE_Aeromo_phiO18P: putative tail fiber assembly protein; ASA_3833; phage(gi148727172)  2e-32  Click
7 complement(4125117..4127207)  PHAGE_Aeromo_phiO18P: putative tail fiber protein; ASA_3834; phage(gi158518662)  0.0  Click
8 complement(4127204..4127806)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; ASA_3835; phage(gi148727169)  8e-106  Click
9 complement(4127799..4128959)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; ASA_3836; phage(gi148727168)  0.0  Click
10 complement(4128983..4129321)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; ASA_3837; phage(gi148727167)  4e-53  Click
11 complement(4129321..4131372)  PHAGE_Aeromo_phiO18P: putative tail tape measure protein; ASA_3838; phage(gi148727166)  0.0  Click
12 complement(4131567..4131830)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; ASA_3839; phage(gi148727164)  9e-27  Click
13 complement(4131827..4131976)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_35; ASA_3840; phage(gi148727163)  1e-18  Click
14 complement(4131954..4132388)  phage protein; ASA_3841  N/A  Click
15 complement(4132385..4132846)  PHAGE_Aeromo_phiO18P: putative muramidase; ASA_3842; phage(gi148727162)  3e-72  Click
16 complement(4132833..4133168)  PHAGE_Aeromo_phiO18P: putative holin; ASA_3843; phage(gi148727161)  1e-29  Click
17 complement(4133183..4133392)  PHAGE_Aeromo_phiO18P: putative zinc finger protein; ASA_3844; phage(gi148727160)  3e-28  Click
18 complement(4133402..4133857)  PHAGE_Aeromo_phiO18P: putative tail tube protein; ASA_3845; phage(gi148727159)  3e-76  Click
19 complement(4133861..4134997)  PHAGE_Aeromo_phiO18P: putative tail sheath protein; ASA_3846; phage(gi148727158)  0.0  Click
20 complement(4135002..4135688)  PHAGE_Aeromo_phiO18P: putative tail completion protein; ASA_3847; phage(gi148727157)  2e-107  Click
21 complement(4135691..4136209)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; ASA_3848; phage(gi148727156)  3e-89  Click
22 complement(4136206..4136667)  PHAGE_Aeromo_phiO18P: putative head completion protein; ASA_3849; phage(gi148727155)  2e-71  Click
23 complement(4136783..4137511)  PHAGE_Aeromo_phiO18P: putative terminase small subunit; ASA_3850; phage(gi148727154)  1e-132  Click
24 complement(4137515..4138480)  PHAGE_Aeromo_phiO18P: putative major capsid protein; ASA_3851; phage(gi148727153)  1e-161  Click
25 complement(4138577..4139449)  PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; ASA_3852; phage(gi148727152)  3e-120  Click
26 4139627..4141447  PHAGE_Aeromo_phiO18P: putative terminase large subunit; ASA_3853; phage(gi148727151)  0.0  Click
27 4141444..4142460  PHAGE_Aeromo_phiO18P: putative portal protein; ASA_3854; phage(gi148727149)  0.0  Click
28 4142526..4142777  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; ASA_3855; phage(gi148727148)  2e-37  Click
29 4145007..4145951  PHAGE_Salmon_SSU5: hypothetical protein; ASA_3857; phage(gi410491447)  1e-07  Click
Region 5, total : 45 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4119147..4119201  attL    TTCAAAATCCGCCGATGAATAATCGTGTCGGTTCGAGTCCGACCCCGGGCACCAT  N/A  Click
2 4120047..4121090  PHAGE_Campyl_CP30A: hypothetical protein; ASA_3828; phage(gi410493032)  3e-14  Click
3 4121087..4121623  hypothetical protein; ASA_3829  N/A  Click
4 complement(4121649..4123262)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; ASA_3830; phage(gi148727175)  0.0  Click
5 complement(4123259..4123750)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; ASA_3831; phage(gi148727174)  1e-75  Click
6 complement(4123798..4124679)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_44; ASA_3832; phage(gi148727173)  2e-129  Click
7 complement(4124676..4125101)  PHAGE_Aeromo_phiO18P: putative tail fiber assembly protein; ASA_3833; phage(gi148727172)  2e-32  Click
8 complement(4125117..4127207)  PHAGE_Aeromo_phiO18P: putative tail fiber protein; ASA_3834; phage(gi158518662)  0.0  Click
9 complement(4127204..4127806)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; ASA_3835; phage(gi148727169)  8e-106  Click
10 complement(4127799..4128959)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; ASA_3836; phage(gi148727168)  0.0  Click
11 complement(4128983..4129321)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; ASA_3837; phage(gi148727167)  4e-53  Click
12 complement(4129321..4131372)  PHAGE_Aeromo_phiO18P: putative tail tape measure protein; ASA_3838; phage(gi148727166)  0.0  Click
13 complement(4131567..4131830)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; ASA_3839; phage(gi148727164)  9e-27  Click
14 complement(4131827..4131976)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_35; ASA_3840; phage(gi148727163)  1e-18  Click
15 complement(4131954..4132388)  phage protein; ASA_3841  N/A  Click
16 complement(4132385..4132846)  PHAGE_Aeromo_phiO18P: putative muramidase; ASA_3842; phage(gi148727162)  3e-72  Click
17 complement(4132833..4133168)  PHAGE_Aeromo_phiO18P: putative holin; ASA_3843; phage(gi148727161)  1e-29  Click
18 complement(4133183..4133392)  PHAGE_Aeromo_phiO18P: putative zinc finger protein; ASA_3844; phage(gi148727160)  3e-28  Click
19 complement(4133402..4133857)  PHAGE_Aeromo_phiO18P: putative tail tube protein; ASA_3845; phage(gi148727159)  3e-76  Click
20 complement(4133861..4134997)  PHAGE_Aeromo_phiO18P: putative tail sheath protein; ASA_3846; phage(gi148727158)  0.0  Click
21 complement(4135002..4135688)  PHAGE_Aeromo_phiO18P: putative tail completion protein; ASA_3847; phage(gi148727157)  2e-107  Click
22 complement(4135691..4136209)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; ASA_3848; phage(gi148727156)  3e-89  Click
23 complement(4136206..4136667)  PHAGE_Aeromo_phiO18P: putative head completion protein; ASA_3849; phage(gi148727155)  2e-71  Click
24 complement(4136783..4137511)  PHAGE_Aeromo_phiO18P: putative terminase small subunit; ASA_3850; phage(gi148727154)  1e-132  Click
25 complement(4137515..4138480)  PHAGE_Aeromo_phiO18P: putative major capsid protein; ASA_3851; phage(gi148727153)  1e-161  Click
26 complement(4138577..4139449)  PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; ASA_3852; phage(gi148727152)  3e-120  Click
27 4139627..4141447  PHAGE_Aeromo_phiO18P: putative terminase large subunit; ASA_3853; phage(gi148727151)  0.0  Click
28 4141444..4142460  PHAGE_Aeromo_phiO18P: putative portal protein; ASA_3854; phage(gi148727149)  0.0  Click
29 4142526..4142777  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; ASA_3855; phage(gi148727148)  2e-37  Click
30 4145007..4145951  PHAGE_Salmon_SSU5: hypothetical protein; ASA_3857; phage(gi410491447)  1e-07  Click
31 4146096..4146602  PHAGE_Bathyc_BpV1: hypothetical protein; ASA_3858; phage(gi313768172)  2e-10  Click
32 4146964..4147821  hypothetical protein; ASA_3859  N/A  Click
33 4147824..4148483  hypothetical protein; ASA_3860  N/A  Click
34 complement(4148740..4148997)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_14; ASA_3861; phage(gi148727143)  5e-24  Click
35 complement(4148999..4151278)  PHAGE_Aeromo_phiO18P: putative replication protein; ASA_3862; phage(gi148727142)  0.0  Click
36 complement(4151275..4151532)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_12; ASA_3863; phage(gi148727141)  8e-14  Click
37 complement(4151529..4151834)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_11; ASA_3864; phage(gi148727140)  1e-30  Click
38 complement(4151831..4152040)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_10; ASA_3865; phage(gi148727139)  2e-25  Click
39 complement(4152111..4152374)  PHAGE_Yersin_413C: gpC; ASA_3866; phage(gi30065734)  3e-07  Click
40 complement(4152633..4153085)  PHAGE_Aeromo_phiO18P: hypothetical protein phio18_7; ASA_3867; phage(gi148727136)  1e-64  Click
41 complement(4153102..4153635)  PHAGE_Aeromo_phiO18P: putative cII protein; ASA_3868; phage(gi148727135)  5e-76  Click
42 complement(4153638..4153856)  PHAGE_Aeromo_phiO18P: putative cox protein; ASA_3869; phage(gi148727134)  8e-23  Click
43 4154004..4154720  PHAGE_Aeromo_phiO18P: putative cI repressor; ASA_3870; phage(gi148727133)  6e-112  Click
44 4154791..4155852  PHAGE_Aeromo_phiO18P: putative integrase; ASA_3871; phage(gi148727179)  5e-172  Click
45 4155922..4155976  attR    TTCAAAATCCGCCGATGAATAATCGTGTCGGTTCGAGTCCGACCCCGGGCACCAT  N/A  Click
46 4156238..4157452  PROPHAGE_Escher_CFT073: putative prophage integrase; ASA_3872; phage(gi26250313)  2e-96  Click
47 complement(4157632..4158663)  PROPHAGE_Escher_EDL933: putative transposase; ASA_3873; phage(gi15803522)  2e-90  Click