Definition Burkholderia vietnamiensis G4 chromosome 2, complete sequence.
Accession NC_009255
Length 2,411,759
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1103635..1104996)  PROPHAGE_Escher_CFT073: transposase; Bcep1808_4289; phage(gi26248352)  2e-13  Click
2 1105488..1105499  attL    CCAGCGGCGACG  N/A  Click
3 complement(1105786..1107405)  PROPHAGE_Escher_CFT073: transposase; Bcep1808_4290; phage(gi26248360)  4e-13  Click
4 complement(1107480..1107761)  hypothetical protein; Bcep1808_4291  N/A  Click
5 complement(1107986..1108531)  PROPHAGE_Escher_CFT073: transposase; Bcep1808_4292; phage(gi26246249)  7e-50  Click
6 complement(1108543..1109250)  PROPHAGE_Escher_CFT073: transposase; Bcep1808_4293; phage(gi26246249)  9e-49  Click
7 complement(1109405..1110238)  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; Bcep1808_4294; phage(gi17546158)  5e-68  Click
8 complement(1110262..1110528)  PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; Bcep1808_4295; phage(gi17546157)  1e-21  Click
9 complement(1110603..1110983)  MarR family transcriptional regulator; Bcep1808_4296  N/A  Click
10 complement(1111091..1112164)  porin; Bcep1808_4297  N/A  Click
11 complement(1112238..1113020)  PHAGE_Plankt_PaV_LD: ABC transporter; Bcep1808_4298; phage(gi371496158)  3e-17  Click
12 complement(1113026..1113838)  binding-protein-dependent transport systems inner membrane component; Bcep1808_4299  N/A  Click
13 complement(1113868..1114851)  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; Bcep1808_4300  N/A  Click
14 1115091..1115525  PHAGE_Stx2_c_1717: truncated transposase; Bcep1808_4301; phage(gi209447151)  7e-16  Click
15 1115522..1115869  PHAGE_Stx2_c_1717: transposase; Bcep1808_4302; phage(gi209447152)  5e-37  Click
16 1115921..1117465  PHAGE_Stx2_c_1717: transposase; Bcep1808_4303; phage(gi209447153)  1e-132  Click
17 1117473..1118069  plasmid pRiA4b ORF-3 family protein; Bcep1808_4304  N/A  Click
18 complement(1118370..1120184)  thiamine pyrophosphate binding domain-containing protein; Bcep1808_4305  N/A  Click
19 complement(1120211..1121698)  betaine-aldehyde dehydrogenase; Bcep1808_4306  N/A  Click
20 complement(1121732..1122724)  4,5-dihydroxyphthalate decarboxylase; Bcep1808_4307  N/A  Click
21 complement(1122773..1124107)  d-galactonate transporter; Bcep1808_4308  N/A  Click
22 1124497..1126017  methyl-accepting chemotaxis sensory transducer; Bcep1808_4309  N/A  Click
23 1127023..1128579  integrase catalytic subunit; Bcep1808_4311  N/A  Click
24 1130733..1130744  attR    CCAGCGGCGACG  N/A  Click
Region 2, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1326810..1326821  attL    TCGGCGACATGG  N/A  Click
2 1339132..1340187  PHAGE_Spirop_R8A2B: putative transposase; Bcep1808_4493; phage(gi9626114)  4e-16  Click
3 complement(1341127..1341786)  PHAGE_Pseudo_F116: hypothetical protein F116p07; Bcep1808_4494; phage(gi56692934)  9e-43  Click
4 complement(1341783..1342115)  hypothetical protein; Bcep1808_4495  N/A  Click
5 complement(1342342..1342695)  PHAGE_Entero_WV8: putative HNH endonuclease; Bcep1808_4496; phage(gi238801846)  1e-19  Click
6 complement(1342829..1343293)  hypothetical protein; Bcep1808_4497  N/A  Click
7 complement(1343308..1343568)  hypothetical protein; Bcep1808_4498  N/A  Click
8 complement(1343568..1343873)  hypothetical protein; Bcep1808_4499  N/A  Click
9 complement(1344075..1344380)  hypothetical protein; Bcep1808_4500  N/A  Click
10 complement(1344377..1344676)  hypothetical protein; Bcep1808_4501  N/A  Click
11 complement(1344673..1346139)  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.044; Bcep1808_4502; phage(gi126010978)  2e-48  Click
12 complement(1346158..1346442)  hypothetical protein; Bcep1808_4503  N/A  Click
13 complement(1346439..1347131)  PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; Bcep1808_4504; phage(gi31415769)  2e-17  Click
14 1347169..1347180  attR    TCGGCGACATGG  N/A  Click
15 complement(1347310..1348362)  PHAGE_Entero_epsilon15: RecT; Bcep1808_4505; phage(gi30387413)  3e-60  Click
16 1349352..1349364  attL    GGGGCGTCGATCC  N/A  Click
17 complement(1349406..1349573)  hypothetical protein; Bcep1808_4507  N/A  Click
18 complement(1349728..1350096)  PHAGE_Burkho_Bcep22: Bcep22gp38; Bcep1808_4508; phage(gi38640344)  3e-22  Click
19 complement(1350096..1350545)  PHAGE_Burkho_Bcep176: gp39; Bcep1808_4509; phage(gi77864664)  5e-15  Click
20 complement(1350567..1351388)  PHAGE_Entero_ES18: gp53; Bcep1808_4510; phage(gi62362266)  3e-53  Click
21 complement(1352005..1352295)  hypothetical protein; Bcep1808_4511  N/A  Click
22 1352832..1353218  hypothetical protein; Bcep1808_4512  N/A  Click
23 complement(1353375..1354430)  PHAGE_Spirop_R8A2B: putative transposase; Bcep1808_4513; phage(gi9626114)  4e-16  Click
24 1367613..1367625  attR    GGGGCGTCGATCC  N/A  Click
Region 3, total : 49 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1355600..1355986)  PHAGE_Burkho_phiE125: putative repressor protein; Bcep1808_4517; phage(gi17975214)  9e-11  Click
2 1356034..1356318  PHAGE_Entero_c_1: prophage antirepressor; Bcep1808_4518; phage(gi428781783)  2e-12  Click
3 1356440..1356808  hypothetical protein; Bcep1808_4519  N/A  Click
4 1356819..1357100  hypothetical protein; Bcep1808_4520  N/A  Click
5 1357276..1357647  hypothetical protein; Bcep1808_4521  N/A  Click
6 1357644..1357868  hypothetical protein; Bcep1808_4522  N/A  Click
7 1357870..1358856  PHAGE_Pseudo_phi297: putative DNA replication protein O; Bcep1808_4523; phage(gi374531278)  7e-12  Click
8 1358894..1359238  hypothetical protein; Bcep1808_4524  N/A  Click
9 1359235..1359711  PHAGE_Pseudo_phi297: holliday junction resolvase; Bcep1808_4525; phage(gi374531280)  4e-31  Click
10 1359758..1360051  hypothetical protein; Bcep1808_4526  N/A  Click
11 1360048..1360641  PHAGE_Burkho_Bcep176: gp2; Bcep1808_4527; phage(gi77864627)  4e-74  Click
12 1361010..1361324  hypothetical protein; Bcep1808_4528  N/A  Click
13 1361275..1362828  PHAGE_Vibrio_CP_T1: putative TerL large-subunit terminase; Bcep1808_4529; phage(gi418489210)  2e-110  Click
14 1362849..1364315  PHAGE_Aggreg_S1249: phage-related protein HI1409; Bcep1808_4530; phage(gi273809569)  3e-37  Click
15 1364312..1365067  PHAGE_Aggreg_S1249: putative minor head protein; Bcep1808_4531; phage(gi273809568)  1e-16  Click
16 1365534..1366991  PHAGE_Aggreg_S1249: hypothetical protein; Bcep1808_4532; phage(gi273809565)  9e-24  Click
17 1367001..1367507  putative bacteriophage protein; Bcep1808_4533  N/A  Click
18 1367628..1368668  putative bacteriophage protein; Bcep1808_4534  N/A  Click
19 1368670..1369137  hypothetical protein; Bcep1808_4535  N/A  Click
20 1369200..1369583  PHAGE_Burkho_BcepB1A: gp21; Bcep1808_4536; phage(gi48697511)  2e-07  Click
21 1369612..1370094  PHAGE_Psychr_pOW20_A: hypothetical protein; Bcep1808_4537; phage(gi472339833)  2e-09  Click
22 1370156..1370527  putative bacteriophage protein; Bcep1808_4538  N/A  Click
23 1371071..1371322  PHAGE_Shigel_Shfl2: putative homing endonuclease; Bcep1808_4539; phage(gi330858699)  9e-05  Click
24 1371319..1371897  putative bacteriophage protein; Bcep1808_4540  N/A  Click
25 complement(1371885..1372367)  PHAGE_Xantho_Xop411: p55.1; Bcep1808_4541; phage(gi148727230)  6e-19  Click
26 1372561..1374036  PHAGE_Aggreg_S1249: hypothetical protein; Bcep1808_4542; phage(gi273809558)  3e-74  Click
27 1374039..1374575  PHAGE_Xantho_phiL7: P56; Bcep1808_4543; phage(gi238695643)  1e-24  Click
28 1374590..1375030  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; Bcep1808_4544; phage(gi431809991)  2e-06  Click
29 1375033..1375584  putative bacteriophage protein; Bcep1808_4545  N/A  Click
30 1375735..1377630  PHAGE_Aggreg_S1249: putative tail length tape measure protein; Bcep1808_4546; phage(gi273809555)  4e-09  Click
31 1377627..1378205  PHAGE_Psychr_pOW20_A: hypothetical protein; Bcep1808_4547; phage(gi472339841)  2e-11  Click
32 1378205..1378510  PHAGE_Psychr_pOW20_A: hypothetical protein; Bcep1808_4548; phage(gi472339842)  6e-06  Click
33 1378523..1379038  hypothetical protein; Bcep1808_4549  N/A  Click
34 complement(1379226..1379582)  PHAGE_Salmon_SPN3UB: Arc-like DNA binding domain protein; Bcep1808_4550; phage(gi423262396)  4e-09  Click
35 1379706..1379843  Arc domain-containing protein; Bcep1808_4551  N/A  Click
36 1379899..1380162  hypothetical protein; Bcep1808_4552  N/A  Click
37 1380162..1380944  PHAGE_Salmon_ST64B: hypothetical protein sb46; Bcep1808_4553; phage(gi23505490)  3e-23  Click
38 1380941..1381264  hypothetical protein; Bcep1808_4554  N/A  Click
39 1381321..1382289  PHAGE_Aggreg_S1249: hypothetical protein; Bcep1808_4555; phage(gi273809551)  1e-31  Click
40 1382698..1383438  PHAGE_Aggreg_S1249: putative baseplate protein; Bcep1808_4556; phage(gi273809550)  4e-26  Click
41 1383446..1383799  PHAGE_Aggreg_S1249: hypothetical protein; Bcep1808_4557; phage(gi273809549)  8e-14  Click
42 1383796..1384977  PHAGE_Iodoba_phiPLPE: gp61 putative baseplate protein; Bcep1808_4558; phage(gi197085675)  7e-43  Click
43 1384977..1385639  PHAGE_Aggreg_S1249: hypothetical protein; Bcep1808_4559; phage(gi273809547)  4e-09  Click
44 1385704..1386714  PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Bcep1808_4560; phage(gi414087138)  6e-05  Click
45 complement(1386889..1387644)  hypothetical protein; Bcep1808_4561  N/A  Click
46 1387802..1387984  hypothetical protein; Bcep1808_4562  N/A  Click
47 1388057..1388635  PHAGE_Salmon_PVP_SE1: lysozyme; Bcep1808_4563; phage(gi363539668)  2e-28  Click
48 1388699..1389118  hypothetical protein; Bcep1808_4564  N/A  Click
49 1389342..1389773  PHAGE_Bordet_1: phage tail protein; Bcep1808_4565; phage(gi41179369)  3e-08  Click