| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1243229..1243241 | attL TAAACCCATTTTT | N/A | Click |
| 2 | 1255344..1256138 | PHAGE_Cafete_BV_PW1: putative apurinic-apyrimidinic endonuclease 1; Dred_1180; phage(gi310831095) | 2e-14 | Click |
| 3 | 1256453..1258318 | PHAGE_Apoche_nucleopolyhedrovirus: calyx/pep; Dred_1181; phage(gi402502187) | 2e-05 | Click |
| 4 | 1258506..1258582 | tRNA | N/A | Click |
| 5 | complement(1258679..1259809) | PROPHAGE_Mesorh_MAFF303099: bacteriophage integrase; Dred_1182; phage(gi13470699) | 2e-22 | Click |
| 6 | complement(1259977..1260609) | PHAGE_Deep_s_D6E: transcriptional regulator; Dred_1183; phage(gi423262353) | 5e-31 | Click |
| 7 | 1260784..1261038 | hypothetical protein; Dred_1184 | N/A | Click |
| 8 | 1261449..1261799 | PHAGE_Strept_MM1: hypothetical protein MM1p17; Dred_1185; phage(gi15088759) | 5e-12 | Click |
| 9 | 1261825..1262541 | PHAGE_Clostr_phiCD38_2: hypothetical protein; Dred_1186; phage(gi333798150) | 5e-33 | Click |
| 10 | 1262627..1263142 | PHAGE_Bacill_PBC1: hypothetical protein; Dred_1187; phage(gi389060349) | 2e-09 | Click |
| 11 | 1263142..1264335 | PHAGE_Staphy_2: hypothetical protein SPTP3102_gp19; Dred_1188; phage(gi156603968) | 1e-98 | Click |
| 12 | 1264447..1265004 | PHAGE_Staphy_phi7401PVL: hypothetical protein; Dred_1189; phage(gi448244654) | 4e-53 | Click |
| 13 | 1265068..1265328 | hypothetical protein; Dred_1190 | N/A | Click |
| 14 | 1265474..1267426 | PHAGE_Staphy_phi7401PVL: phage encoded DNA polymerase I; Dred_1191; phage(gi448244655) | 0.0 | Click |
| 15 | 1267468..1268838 | PHAGE_Synech_S_CBS3: DNA methylase; Dred_1192; phage(gi331028047) | 4e-137 | Click |
| 16 | 1268828..1269820 | PHAGE_Synech_S_CBS3: DNA methylase; Dred_1193; phage(gi331028047) | 1e-107 | Click |
| 17 | 1269835..1270272 | hypothetical protein; Dred_1194 | N/A | Click |
| 18 | 1270928..1271914 | hypothetical protein; Dred_1195 | N/A | Click |
| 19 | 1272083..1274539 | PHAGE_Staphy_phi7401PVL: virulence-associated protein E; Dred_1196; phage(gi448244658) | 0.0 | Click |
| 20 | 1275145..1275426 | PHAGE_Bacter_2: hypothetical protein APSE235; Dred_1197; phage(gi212499740) | 4e-17 | Click |
| 21 | 1275423..1276787 | PHAGE_Entero_phiFL4A: DNA helicase; Dred_1198; phage(gi281416462) | 6e-155 | Click |
| 22 | 1276989..1277468 | hypothetical protein; Dred_1199 | N/A | Click |
| 23 | 1277449..1278120 | PHAGE_Bacill_PBC1: thymidylate synthase; Dred_1200; phage(gi389060353) | 3e-25 | Click |
| 24 | 1278319..1278855 | PHAGE_Clostr_PhiS63: gp40; Dred_1201; phage(gi388570666) | 2e-27 | Click |
| 25 | 1279245..1279796 | hypothetical protein; Dred_1202 | N/A | Click |
| 26 | 1279777..1281621 | PHAGE_Synech_S_CBS1: large terminase subunit; Dred_1203; phage(gi356870795) | 7e-96 | Click |
| 27 | 1281892..1283487 | PHAGE_Provid_Redjac: phage portal protein; Dred_1204; phage(gi410490794) | 3e-44 | Click |
| 28 | 1283789..1284691 | PHAGE_Geobac_E2: putative Clp peptidase; Dred_1205; phage(gi148747731) | 1e-30 | Click |
| 29 | 1292169..1292181 | attR TAAACCCATTTTT | N/A | Click |
Region 2, total : 11 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2469827..2469838 | attL TTTGGTGGAGAA | N/A | Click |
| 2 | 2469962..2471341 | PHAGE_Bovine_virus: RT-IN; Dred_2257; phage(gi9626228) | 3e-07 | Click |
| 3 | 2471341..2472141 | PHAGE_Pseudo_B3: putative transposase B subunit; Dred_2258; phage(gi56692579) | 3e-07 | Click |
| 4 | complement(2472276..2472497) | acyltransferase; Dred_2259 | N/A | Click |
| 5 | complement(2473541..2474914) | PHAGE_Megavi_lba: putative RNA methyltransferase; Dred_2261; phage(gi448825451) | 3e-33 | Click |
| 6 | 2475000..2475620 | PHAGE_Plutel_granulovirus: PxORF73 peptide; Dred_2262; phage(gi11068076) | 7e-12 | Click |
| 7 | complement(2476060..2477637) | PHAGE_Lactob_LF1: tail fiber; Dred_2263; phage(gi418489400) | 2e-07 | Click |
| 8 | complement(2477753..2478529) | PHAGE_Cafete_BV_PW1: putative ubiquitin-activating enzyme E1; Dred_2264; phage(gi310831425) | 4e-13 | Click |
| 9 | complement(2479044..2479481) | MOSC domain-containing protein; Dred_2266 | N/A | Click |
| 10 | complement(2479469..2479963) | molybdenum cofactor biosynthesis protein C; Dred_2267 | N/A | Click |
| 11 | complement(2479967..2480944) | PHAGE_Campyl_CP21: radical SAM domain-containing protein; Dred_2268; phage(gi422935302) | 4e-07 | Click |
| 12 | complement(2481036..2481806) | PHAGE_Plankt_PaV_LD: ABC transporter; Dred_2269; phage(gi371496158) | 6e-18 | Click |
| 13 | 2492450..2492461 | attR TTTGGTGGAGAA | N/A | Click |
Region 3, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2819798..2821585) | PHAGE_Staphy_EW: ORF002; Dred_2595; phage(gi66395809) | 5e-06 | Click |
| 2 | complement(2821587..2822450) | hypothetical protein; Dred_2596 | N/A | Click |
| 3 | complement(2822887..2823615) | PHAGE_Bacill_BtCS33: phage tail fiber protein; Dred_2597; phage(gi392972723) | 3e-14 | Click |
| 4 | complement(2823612..2825555) | PHAGE_Geobac_E2: putative tail tape measure protein; Dred_2598; phage(gi148747742) | 6e-24 | Click |
| 5 | complement(2825717..2826130) | hypothetical protein; Dred_2599 | N/A | Click |
| 6 | complement(2826143..2826928) | PHAGE_Lactob_c5: putative major tail protein; Dred_2600; phage(gi418488164) | 8e-15 | Click |
| 7 | complement(2826936..2827352) | HK97 family phage protein; Dred_2601 | N/A | Click |
| 8 | complement(2827647..2828000) | hypothetical protein; Dred_2602 | N/A | Click |
| 9 | complement(2827972..2828280) | PHAGE_Lister_2389: Gp6 protein; Dred_2603; phage(gi17488509) | 8e-12 | Click |
| 10 | complement(2828295..2829491) | PHAGE_Lister_2389: major capsid protein a; Dred_2604; phage(gi17488508) | 3e-74 | Click |
| 11 | complement(2829518..2830294) | PHAGE_Lactob_JCL1032: putative ClpP protease; Dred_2605; phage(gi418489116) | 1e-44 | Click |
| 12 | complement(2830291..2831457) | PHAGE_Lister_2389: hypothetical protein 2389gp03; Dred_2606; phage(gi17488506) | 1e-59 | Click |
| 13 | complement(2831473..2833149) | PHAGE_Clostr_phiCD6356: putative terminase large subunit; Dred_2607; phage(gi326536849) | 9e-124 | Click |
| 14 | complement(2833127..2833441) | PHAGE_Lister_2389: terminase small subunit; Dred_2608; phage(gi17488504) | 3e-15 | Click |
| 15 | complement(2833552..2833872) | PHAGE_Lister_2389: Gp54 protein; Dred_2609; phage(gi17488559) | 1e-14 | Click |
| 16 | complement(2834933..2835601) | hypothetical protein; Dred_2610 | N/A | Click |
| 17 | complement(2835775..2836296) | PHAGE_Clostr_PhiS63: gp40; Dred_2611; phage(gi388570666) | 2e-21 | Click |