Definition Herminiimonas arsenicoxydans chromosome, complete genome.
Accession NC_009138
Length 3,424,307
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1164493..1165347  PHAGE_Megavi_lba: dTDP-4-dehydrorhamnose reductase; HEAR1146; phage(gi448825505)  4e-31  Click
2 1165361..1166371  PHAGE_Megavi_lba: putative dTDP-d-glucose 4 6-dehydratase; HEAR1147; phage(gi448825504)  5e-44  Click
3 1166364..1167488  PHAGE_Megavi_lba: UDP-N-acetylglucosamine 2-epimerase; HEAR1148; phage(gi448825506)  2e-98  Click
4 1167551..1168489  PHAGE_Acanth_moumouvirus: NAD-dependent epimerase/dehydratase; HEAR1149; phage(gi441432391)  2e-13  Click
5 1168499..1169059  putative sugar-1-phosphate transferase (partial before start's modification); HEAR1150  N/A  Click
6 1169066..1171045  PHAGE_Megavi_lba: putative dTDP-d-glucose 4 6-dehydratase; nucleotide; phage sugar epimerase; HEAR1151(gi448825504)  1e-18  Click
7 1171081..1172184  PHAGE_Escher_phAPEC8: putative dTDP-glucose 4,6-dehydratase; HEAR1152; phage(gi448260373)  5e-86  Click
8 1172197..1173102  PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; HEAR1153; phage(gi448260372)  2e-99  Click
9 1173120..1173650  PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose 3,5-epimerase; HEAR1154; phage(gi448260371)  1e-42  Click
10 1173713..1174528  PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose reductase; HEAR1155; phage(gi448260370)  2e-25  Click
11 complement(1174649..1175683)  putative iron binding protein component of ABC iron transporter; HEAR1156  N/A  Click
12 1175866..1176798  PHAGE_Acanth_moumouvirus: patatin-like phospholipase; HEAR1158; phage(gi441432299)  2e-13  Click
13 complement(1177079..1178104)  PROPHAGE_Shewan_MR-1: IS110 family transposase; HEAR1159; phage(gi24375433)  1e-50  Click
14 complement(1178220..1178756)  PHAGE_Clostr_phiMMP04: cell wall hydrolase; HEAR1160; phage(gi414090458)  2e-10  Click
Region 2, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2287046..2287059  attL    GAAGCTGGTGCGGC  N/A  Click
2 2296099..2296929  PHAGE_Deep_s_D6E: hypothetical protein; HEAR2307; phage(gi423262359)  5e-18  Click
3 2296933..2297568  PHAGE_Xantho_CP2: hypothetical protein; HEAR2308; phage(gi448245207)  2e-19  Click
4 2297565..2298635  PHAGE_Iodoba_phiPLPE: gp77 putative tail-fiber protein; HEAR2309; phage(gi197085691)  4e-29  Click
5 2298643..2298897  PHAGE_Entero_GJ1: putative single-stranded DNA-binding protein; HEAR2310; phage(gi161617930)  3e-08  Click
6 2298972..2299847  hypothetical protein; HEAR2311  N/A  Click
7 2299844..2300119  hypothetical protein; HEAR2312  N/A  Click
8 2300122..2300733  hypothetical protein; HEAR2313  N/A  Click
9 2300730..2301056  hypothetical protein; HEAR2314  N/A  Click
10 2301053..2301223  hypothetical protein; HEAR2315  N/A  Click
11 2301220..2301417  PHAGE_Bordet_1: hypothetical protein BIP-1p47; HEAR2316; phage(gi45580792)  2e-11  Click
12 2301393..2302556  PHAGE_Bordet_1: integrase; HEAR2317; phage(gi45580793)  1e-74  Click
13 complement(2302582..2302656)  tRNA  N/A  Click
14 complement(2302694..2303398)  PHAGE_Strept_VWB: hypothetical protein VWBp10; HEAR2318; phage(gi41057226)  9e-12  Click
15 complement(2303489..2303929)  PHAGE_Salmon_SSU5: putative ribonuclease H; HEAR2319; phage(gi410491500)  2e-37  Click
16 2312582..2312595  attR    GAAGCTGGTGCGGC  N/A  Click