Definition | Shewanella baltica OS155 chromosome, complete genome. |
---|---|
Accession | NC_009052 |
Length | 5,127,376 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 53 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1444093..1444104 | attL TTTAATATGATT | N/A | Click |
2 | 1444757..1445821 | PROPHAGE_Escher_CFT073: transposase insF; Sbal_1254; phage(gi26250329) | 2e-11 | Click |
3 | 1445924..1446292 | hypothetical protein; Sbal_1255 | N/A | Click |
4 | 1446557..1446602 | attL TTGGTGGAGGCGGCGGGACTTGAACCCGCGTCCAGAACACCTACAT | N/A | Click |
5 | 1447185..1448687 | integrase catalytic subunit; Sbal_1256 | N/A | Click |
6 | 1448677..1449423 | PROPHAGE_Escher_CFT073: transposase/IS protein; Sbal_1257; phage(gi26248359) | 2e-35 | Click |
7 | 1449843..1450343 | transposase IS3/IS911 family protein; Sbal_1258 | N/A | Click |
8 | 1450349..1451398 | PROPHAGE_Escher_CFT073: transposase insF; Sbal_1259; phage(gi26249410) | 8e-14 | Click |
9 | 1451693..1452034 | hypothetical protein; Sbal_1260 | N/A | Click |
10 | 1452105..1452545 | helix-turn-helix domain-containing protein; Sbal_1261 | N/A | Click |
11 | complement(1452674..1453483) | PHAGE_Staphy_phiN315: hypothetical protein SA1795; Sbal_1262; phage(gi30043973) | 3e-05 | Click |
12 | complement(1453480..1454529) | PROPHAGE_Escher_CFT073: transposase insF; Sbal_1263; phage(gi26249410) | 8e-14 | Click |
13 | complement(1454535..1455035) | transposase IS3/IS911 family protein; Sbal_1264 | N/A | Click |
14 | complement(1455080..1455577) | PHAGE_Lactoc_1: ORF54; Sbal_1265; phage(gi13786585) | 3e-07 | Click |
15 | 1455753..1455770 | attL CCAGAATTCAGATAATAA | N/A | Click |
16 | 1455854..1456801 | PROPHAGE_Neisse_MC58: IS30 family transposase; Sbal_1266; phage(gi15677611) | 2e-67 | Click |
17 | complement(1456755..1457372) | hypothetical protein; Sbal_1267 | N/A | Click |
18 | 1457403..1457420 | attR CCAGAATTCAGATAATAA | N/A | Click |
19 | 1457505..1458446 | PROPHAGE_Neisse_MC58: IS30 family transposase; Sbal_1268; phage(gi15677611) | 6e-60 | Click |
20 | complement(1458482..1459183) | PHAGE_Pasteu_F108: CI; Sbal_1269; phage(gi109302899) | 1e-13 | Click |
21 | 1459277..1459477 | PHAGE_Aeromo_phiO18P: putative cox protein; Sbal_1270; phage(gi148727134) | 4e-10 | Click |
22 | 1459593..1460159 | PHAGE_Aeromo_phiO18P: putative cII protein; Sbal_1271; phage(gi148727135) | 7e-19 | Click |
23 | 1460403..1460642 | hypothetical protein; Sbal_1272 | N/A | Click |
24 | 1460617..1460910 | hypothetical protein; Sbal_1273 | N/A | Click |
25 | 1460907..1461152 | PHAGE_Vibrio_VHML: ORF53; Sbal_1274; phage(gi27311221) | 4e-06 | Click |
26 | 1461149..1461388 | hypothetical protein; Sbal_1275 | N/A | Click |
27 | 1461385..1461639 | hypothetical protein; Sbal_1276 | N/A | Click |
28 | 1461639..1463870 | PHAGE_Haemop_HP1: replication protein; Sbal_1277; phage(gi9628613) | 8e-76 | Click |
29 | complement(1464806..1465054) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; Sbal_1278; phage(gi148727148) | 4e-18 | Click |
30 | 1465624..1465887 | prevent-host-death family protein; Sbal_1279 | N/A | Click |
31 | 1465898..1466254 | hypothetical protein; Sbal_1280 | N/A | Click |
32 | complement(1466279..1467319) | PHAGE_Aeromo_phiO18P: putative portal protein; Sbal_1281; phage(gi148727149) | 2e-90 | Click |
33 | complement(1467301..1469109) | PHAGE_Aeromo_phiO18P: putative terminase large subunit; Sbal_1282; phage(gi148727151) | 0.0 | Click |
34 | 1469313..1470239 | PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; Sbal_1283; phage(gi148727152) | 8e-52 | Click |
35 | 1470289..1471332 | PHAGE_Aeromo_phiO18P: putative major capsid protein; Sbal_1284; phage(gi148727153) | 6e-101 | Click |
36 | 1471410..1472000 | PHAGE_Lactob_1: putative tail fibre protein; Sbal_1285; phage(gi226377752) | 2e-05 | Click |
37 | 1472294..1472692 | PHAGE_Aeromo_phiO18P: putative terminase small subunit; Sbal_1286; phage(gi148727154) | 5e-28 | Click |
38 | 1472848..1473309 | PHAGE_Aeromo_phiO18P: putative head completion protein; Sbal_1287; phage(gi148727155) | 4e-07 | Click |
39 | 1473306..1473794 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; Sbal_1288; phage(gi148727156) | 2e-13 | Click |
40 | 1473791..1474453 | PHAGE_Aeromo_phiO18P: putative tail completion protein; Sbal_1289; phage(gi148727157) | 6e-18 | Click |
41 | 1474456..1475562 | PHAGE_Aeromo_phiO18P: putative tail sheath protein; Sbal_1290; phage(gi148727158) | 3e-87 | Click |
42 | 1475575..1476024 | PHAGE_Aeromo_phiO18P: putative tail tube protein; Sbal_1291; phage(gi148727159) | 2e-40 | Click |
43 | 1476038..1476241 | PHAGE_Acinet_133: conserved hypothetical bacterial protein; Sbal_1292; phage(gi326536256) | 8e-07 | Click |
44 | 1476243..1476734 | PHAGE_Salmon_SPN9CC: phage lysozyme; Sbal_1293; phage(gi389060531) | 8e-30 | Click |
45 | 1476718..1477275 | hypothetical protein; Sbal_1294 | N/A | Click |
46 | 1477326..1477616 | PHAGE_Burkho_phiE125: putative class II holin; Sbal_1295; phage(gi17975185) | 1e-06 | Click |
47 | 1477613..1477879 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; Sbal_1296; phage(gi148727164) | 4e-09 | Click |
48 | 1477921..1478067 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_37; Sbal_1297; phage(gi148727165) | 4e-08 | Click |
49 | 1478082..1479854 | PHAGE_Aeromo_phiO18P: putative tail tape measure protein; Sbal_1298; phage(gi148727166) | 6e-126 | Click |
50 | 1479851..1480183 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; Sbal_1299; phage(gi148727167) | 2e-15 | Click |
51 | 1480183..1481385 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; Sbal_1300; phage(gi148727168) | 3e-90 | Click |
52 | 1481382..1482014 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; Sbal_1301; phage(gi148727169) | 3e-24 | Click |
53 | 1482032..1484338 | PHAGE_Aeromo_phiO18P: putative tail fiber protein; Sbal_1302; phage(gi158518662) | 7e-40 | Click |
54 | 1484339..1484836 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; Sbal_1303; phage(gi148727174) | 4e-27 | Click |
55 | 1484836..1485528 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Sbal_1304; phage(gi148727175) | 4e-37 | Click |
56 | 1485530..1485706 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Sbal_1305; phage(gi148727175) | 8e-06 | Click |
57 | 1485734..1486270 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Sbal_1306; phage(gi148727175) | 4e-22 | Click |
58 | 1486938..1486983 | attR TTGGTGGAGGCGGCGGGACTTGAACCCGCGTCCAGAACACCTACAT | N/A | Click |
59 | 1498087..1498098 | attR TTTAATATGATT | N/A | Click |
Region 2, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2507887..2507898 | attL AGCCATGGCTTA | N/A | Click |
2 | complement(2519693..2521792) | PHAGE_Bacill_SPBc2: ABC transporter; Sbal_2175; phage(gi9630145) | 4e-55 | Click |
3 | complement(2521847..2522233) | PHAGE_Human__4: EBNA-1; Sbal_2176; phage(gi82503233) | 2e-11 | Click |
4 | complement(2522403..2522810) | hypothetical protein; Sbal_2177 | N/A | Click |
5 | complement(2522861..2524102) | secretion protein HlyD family protein; Sbal_2178 | N/A | Click |
6 | 2524491..2525408 | PHAGE_Entero_HK022: IS903 transposase; Sbal_2179; phage(gi9634149) | 4e-92 | Click |
7 | complement(2525571..2526209) | PHAGE_Entero_P1: Cin; Sbal_2180; phage(gi46401653) | 8e-08 | Click |
8 | complement(2526395..2527141) | PROPHAGE_Escher_CFT073: transposase/IS protein; Sbal_2181; phage(gi26248359) | 2e-35 | Click |
9 | complement(2527131..2527373) | hypothetical protein; Sbal_2182 | N/A | Click |
10 | 2527424..2530012 | PROPHAGE_Xantho_33913: Tn5041 transposase; Sbal_2183; phage(gi21231545) | 1e-31 | Click |
11 | 2530181..2530441 | hypothetical protein; Sbal_2184 | N/A | Click |
12 | 2530434..2530817 | PHAGE_Vibrio_CTX: RstB; Sbal_2185; phage(gi332672297) | 2e-06 | Click |
13 | 2530988..2531227 | PHAGE_Vibrio_Vf33: Vpf81; Sbal_2186; phage(gi49248523) | 7e-08 | Click |
14 | 2531505..2533073 | PHAGE_Vibrio_Vf33: Vpf491; Sbal_2187; phage(gi49248525) | 2e-07 | Click |
15 | 2533075..2533392 | PHAGE_Vibrio_Vf33: Vpf104; Sbal_2188; phage(gi49248526) | 7e-19 | Click |
16 | 2533389..2534534 | PHAGE_Vibrio_Vf33: Vpf380; Sbal_2189; phage(gi49248527) | 4e-54 | Click |
17 | complement(2534991..2535209) | hypothetical protein; Sbal_2190 | N/A | Click |
18 | complement(2535901..2536083) | RstR-like phage repressor protein; Sbal_2191 | N/A | Click |
19 | 2536208..2537860 | PHAGE_Entero_Ike: G II protein; Sbal_2192; phage(gi9626233) | 3e-67 | Click |
20 | 2537860..2538210 | hypothetical protein; Sbal_2193 | N/A | Click |
21 | 2538477..2538695 | hypothetical protein; Sbal_2194 | N/A | Click |
22 | 2538831..2540678 | PHAGE_Entero_vB_EcoM_VR7: hypothetical protein; Sbal_2195; phage(gi314121758) | 6e-42 | Click |
23 | 2541106..2542473 | PHAGE_Vibrio_VfO4K68: Vpf461; Sbal_2196; phage(gi9635484) | 4e-50 | Click |
24 | 2543002..2543013 | attR AGCCATGGCTTA | N/A | Click |
25 | complement(2543022..2544317) | phage integrase family protein; Sbal_2197 | N/A | Click |
Region 3, total : 42 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4211201..4212268 | PHAGE_Entero_mEp460: integrase; Sbal_3586; phage(gi428782338) | 2e-103 | Click |
2 | 4212511..4212524 | attL TAATAGCTATTAAT | N/A | Click |
3 | complement(4212602..4212814) | PHAGE_Stenot_S1: hypothetical protein StPS1_gp22; Sbal_3587; phage(gi213163921) | 2e-05 | Click |
4 | complement(4212840..4214600) | PHAGE_Stenot_S1: putative tail protein c; Sbal_3588; phage(gi213163920) | 3e-26 | Click |
5 | complement(4214877..4215830) | PHAGE_Stenot_S1: hypothetical protein StPS1_gp20; Sbal_3589; phage(gi213163919) | 3e-09 | Click |
6 | complement(4215843..4218341) | PHAGE_Stenot_S1: putative tail protein b; Sbal_3590; phage(gi213163918) | 1e-38 | Click |
7 | complement(4218349..4218720) | hypothetical protein; Sbal_3591 | N/A | Click |
8 | complement(4218759..4223039) | PHAGE_Strept_phi3396: putative phage-related tail tape measure protein; Sbal_3592; phage(gi126011107) | 2e-44 | Click |
9 | complement(4223132..4223851) | PHAGE_Pseudo_F10: hypothetical protein PPF10_gp010; Sbal_3593; phage(gi148912775) | 2e-15 | Click |
10 | complement(4223848..4224273) | hypothetical protein; Sbal_3594 | N/A | Click |
11 | complement(4224307..4224864) | hypothetical protein; Sbal_3595 | N/A | Click |
12 | complement(4224868..4225212) | hypothetical protein; Sbal_3596 | N/A | Click |
13 | complement(4225205..4225528) | PHAGE_Entero_mEp460: hypothetical protein; putative; phage RecA/RadA recombinase; Sbal_3597(gi428782322) | 4e-14 | Click |
14 | complement(4225609..4227531) | PHAGE_Entero_mEp460: putative protease/scaffold protein; Sbal_3598; phage(gi428782321) | 0.0 | Click |
15 | complement(4227587..4229161) | PHAGE_Entero_mEp460: portal protein; Sbal_3599; phage(gi428782320) | 1e-127 | Click |
16 | complement(4229211..4229456) | PHAGE_Entero_mEp460: hypothetical protein; Sbal_3600; phage(gi428782319) | 2e-10 | Click |
17 | complement(4229447..4231444) | PHAGE_Pseudo_F10: Putative large subunit (GpA homolog) of DNA packaging dimer; Sbal_3601; phage(gi148912767) | 0.0 | Click |
18 | complement(4231419..4231850) | PHAGE_Entero_N15: gp1; Sbal_3602; phage(gi9630465) | 7e-29 | Click |
19 | complement(4231906..4232289) | PHAGE_Bacter_2: phage 21-like group II holin; Sbal_3603; phage(gi212499716) | 6e-05 | Click |
20 | complement(4232352..4232855) | PHAGE_Burkho_phiE202: gp42, protein LysB; Sbal_3604; phage(gi134288770) | 1e-04 | Click |
21 | complement(4232836..4233369) | PHAGE_Xantho_OP1: putative lysozyme; Sbal_3605; phage(gi84662620) | 4e-22 | Click |
22 | 4233659..4233670 | attL AATAAATGTAAC | N/A | Click |
23 | complement(4233845..4234492) | hypothetical protein; Sbal_3606 | N/A | Click |
24 | complement(4234814..4235428) | PHAGE_Ectoca_1: EsV-1-139; Sbal_3607; phage(gi13242610) | 2e-08 | Click |
25 | complement(4235437..4235754) | hypothetical protein; Sbal_3608 | N/A | Click |
26 | complement(4235777..4235995) | XRE family transcriptional regulator; Sbal_3609 | N/A | Click |
27 | complement(4236051..4237307) | PHAGE_Entero_mEp237: integrase; Sbal_3610; phage(gi435439292) | 5e-07 | Click |
28 | complement(4237297..4237983) | PHAGE_Pseudo_PAJU2: putative replication protein P; Sbal_3611; phage(gi209552483) | 3e-21 | Click |
29 | complement(4237980..4238729) | PHAGE_Entero_mEp460: replication protein; Sbal_3612; phage(gi428782359) | 4e-38 | Click |
30 | complement(4238897..4239502) | hypothetical protein; Sbal_3613 | N/A | Click |
31 | complement(4239661..4240284) | PHAGE_Pseudo_phi297: hypothetical protein; Sbal_3614; phage(gi374531276) | 6e-12 | Click |
32 | complement(4240316..4240519) | PHAGE_Pectob_ZF40: putative cro anti-repressor; Sbal_3615; phage(gi422936651) | 4e-08 | Click |
33 | 4240599..4241300 | PHAGE_Haemop_Aaphi23: putative CI protein; Sbal_3616; phage(gi31544010) | 1e-50 | Click |
34 | 4241707..4242597 | PHAGE_Salico_CGphi29: DNA methylase; Sbal_3617; phage(gi472340158) | 2e-65 | Click |
35 | complement(4242574..4243455) | hypothetical protein; Sbal_3618 | N/A | Click |
36 | 4244110..4244463 | hypothetical protein; Sbal_3619 | N/A | Click |
37 | 4244460..4244720 | PHAGE_Entero_mEp460: hypothetical protein; Sbal_3620; phage(gi428782341) | 5e-14 | Click |
38 | 4244746..4245093 | hypothetical protein; Sbal_3621 | N/A | Click |
39 | 4245124..4245747 | PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; Sbal_3622; phage(gi428782758) | 1e-58 | Click |
40 | 4245744..4246133 | hypothetical protein; Sbal_3623 | N/A | Click |
41 | 4246130..4246438 | hypothetical protein; Sbal_3624 | N/A | Click |
42 | 4246439..4246717 | hypothetical protein; Sbal_3625 | N/A | Click |
43 | 4246714..4246944 | hypothetical protein; Sbal_3626 | N/A | Click |
44 | 4247604..4247615 | attR AATAAATGTAAC | N/A | Click |
45 | complement(4247886..4248827) | PROPHAGE_Neisse_MC58: IS30 family transposase; Sbal_3627; phage(gi15677611) | 6e-60 | Click |
46 | 4249276..4249289 | attR TAATAGCTATTAAT | N/A | Click |
Region 4, total : 7 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 5026603..5026833 | integrase, catalytic region; Sbal_4290 | N/A | Click |
2 | complement(5026826..5027638) | PHAGE_Entero_Sf6: putative transposase OrfB; Sbal_4291; phage(gi41057343) | 1e-108 | Click |
3 | complement(5027692..5028003) | PHAGE_Entero_Sf6: gene 56 protein; Sbal_4292; phage(gi41057344) | 4e-32 | Click |
4 | 5028067..5028633 | PROPHAGE_Escher_CFT073: transposase insF; Sbal_4293; phage(gi26249410) | 6e-20 | Click |
5 | complement(5028675..5029706) | periplasmic binding protein/LacI transcriptional regulator; Sbal_4294 | N/A | Click |
6 | complement(5029799..5031262) | PHAGE_Burkho_phi1026b: gp59; Sbal_4295; phage(gi38707949) | 1e-05 | Click |
7 | complement(5031322..5031816) | PHAGE_Bacill_36: baseplate hub protein; Sbal_4296; phage(gi156564128) | 2e-09 | Click |