| Definition | Rhodobacter sphaeroides ATCC 17029 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_009049 |
| Length | 3,147,721 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 296696..296711 | attL CTCACCCCGCACCCCG | N/A | Click |
| 2 | 297943..299121 | PHAGE_Salmon_ST64B: Portal Protein; Rsph17029_0274; phage(gi23505449) | 5e-35 | Click |
| 3 | 299111..299506 | hypothetical protein; Rsph17029_0275 | N/A | Click |
| 4 | 299506..300012 | PHAGE_Salmon_ST64B: Pro-head protease; Rsph17029_0276; phage(gi23505450) | 3e-15 | Click |
| 5 | 300012..301169 | PHAGE_Salmon_ST64B: Major capsid protein precursor; Rsph17029_0277; phage(gi23505451) | 5e-38 | Click |
| 6 | 301182..301559 | PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; Rsph17029_0278; phage(gi168495137) | 6e-09 | Click |
| 7 | 301562..301921 | PHAGE_Pseudo_PAJU2: putative endonuclease; Rsph17029_0279; phage(gi209552497) | 1e-19 | Click |
| 8 | 301918..302391 | PHAGE_Salico_CGphi29: hypothetical protein; Rsph17029_0280; phage(gi472340186) | 3e-06 | Click |
| 9 | 302396..302824 | hypothetical protein; Rsph17029_0281 | N/A | Click |
| 10 | 302821..303135 | PHAGE_Entero_mEp235: head-tail connector II; Rsph17029_0282; phage(gi428781817) | 9e-05 | Click |
| 11 | 303135..303548 | PHAGE_Rhizob_3: p011; Rsph17029_0283; phage(gi195546542) | 5e-13 | Click |
| 12 | 303545..303958 | PHAGE_Rhizob_3: p012; Rsph17029_0284; phage(gi195546543) | 3e-05 | Click |
| 13 | 303958..304281 | PHAGE_Burkho_2: gp9, phage head-tail adaptor, putative; Rsph17029_0285; phage(gi134288641) | 5e-05 | Click |
| 14 | 304281..304715 | PHAGE_Lactob_Sha1: P27 family phage terminase small subunit; Rsph17029_0286; phage(gi418489801) | 1e-11 | Click |
| 15 | 304712..306319 | PHAGE_Pseudo_PAJU2: putative terminase; Rsph17029_0287; phage(gi209552421) | 1e-56 | Click |
| 16 | 306330..308675 | PHAGE_Rhodob_RcapNL: phage tail-related protein; Rsph17029_0288; phage(gi461474975) | 4e-54 | Click |
| 17 | 308675..309031 | hypothetical protein; Rsph17029_0289 | N/A | Click |
| 18 | 310583..310933 | hypothetical protein; Rsph17029_0290 | N/A | Click |
| 19 | 310936..311286 | hypothetical protein; Rsph17029_0291 | N/A | Click |
| 20 | 311424..311439 | attR CTCACCCCGCACCCCG | N/A | Click |
| 21 | 311713..312777 | PHAGE_Escher_HK639: integrase; Rsph17029_0292; phage(gi356870629) | 2e-18 | Click |
Region 2, total : 44 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 636763..636775 | attL TCCGCCTCGGCGC | N/A | Click |
| 2 | 636832..638001 | PHAGE_Azospi_Cd: integrase; Rsph17029_0619; phage(gi168495175) | 5e-25 | Click |
| 3 | 638147..638686 | hypothetical protein; Rsph17029_0620 | N/A | Click |
| 4 | complement(639256..640191) | glycoside hydrolase family protein; Rsph17029_0621 | N/A | Click |
| 5 | complement(640205..642115) | hypothetical protein; Rsph17029_0622 | N/A | Click |
| 6 | complement(642108..642773) | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip020; Rsph17029_0623; phage(gi20065816) | 5e-28 | Click |
| 7 | complement(642773..643204) | hypothetical protein; Rsph17029_0624 | N/A | Click |
| 8 | complement(643763..644392) | PHAGE_Acinet_AP22: putative endolysin/autolysin; Rsph17029_0625; phage(gi388570824) | 5e-14 | Click |
| 9 | complement(644454..644765) | hypothetical protein; Rsph17029_0626 | N/A | Click |
| 10 | complement(644767..645222) | hypothetical protein; Rsph17029_0627 | N/A | Click |
| 11 | complement(645219..645578) | hypothetical protein; Rsph17029_0628 | N/A | Click |
| 12 | complement(645578..646090) | hypothetical protein; Rsph17029_0629 | N/A | Click |
| 13 | complement(646087..649848) | PHAGE_Entero_mEp237: central tail fiber; Rsph17029_0630; phage(gi435439285) | 4e-10 | Click |
| 14 | complement(649853..650266) | PHAGE_Yersin_PY54: hypothetical protein PY54p19; Rsph17029_0631; phage(gi33770528) | 5e-06 | Click |
| 15 | complement(650263..650877) | hypothetical protein; Rsph17029_0632 | N/A | Click |
| 16 | complement(650874..651479) | hypothetical protein; Rsph17029_0633 | N/A | Click |
| 17 | complement(651480..653555) | PHAGE_Pseudo_vB_PaeS_PMG1: tail tape measure protein; Rsph17029_0634; phage(gi374531664) | 2e-61 | Click |
| 18 | complement(653545..653787) | hypothetical protein; Rsph17029_0635 | N/A | Click |
| 19 | complement(653877..654185) | hypothetical protein; Rsph17029_0636 | N/A | Click |
| 20 | complement(654215..654643) | PHAGE_Tetras_SI1: hypothetical protein; Rsph17029_0637; phage(gi472342241) | 7e-05 | Click |
| 21 | complement(654633..655025) | hypothetical protein; Rsph17029_0638 | N/A | Click |
| 22 | complement(655208..655672) | PHAGE_Tetras_SI1: hypothetical protein; Rsph17029_0639; phage(gi472342243) | 4e-10 | Click |
| 23 | complement(655669..655992) | hypothetical protein; Rsph17029_0640 | N/A | Click |
| 24 | complement(655992..656528) | PHAGE_Rhodob_RcapNL: hypothetical protein; Rsph17029_0641; phage(gi461474967) | 1e-09 | Click |
| 25 | complement(656750..657961) | PHAGE_Entero_mEp235: major head subunit; Rsph17029_0642; phage(gi428781815) | 2e-143 | Click |
| 26 | complement(657986..658834) | PHAGE_Entero_mEp235: head maturation protease; Rsph17029_0643; phage(gi428781814) | 2e-77 | Click |
| 27 | complement(658831..660036) | PHAGE_Tetras_SI1: portal protein; Rsph17029_0644; phage(gi472342257) | 6e-72 | Click |
| 28 | complement(660036..661787) | PHAGE_Tetras_SI1: terminase; Rsph17029_0645; phage(gi472342258) | 2e-125 | Click |
| 29 | complement(661792..662277) | PHAGE_Tetras_SI1: terminase small subunit; Rsph17029_0646; phage(gi472342259) | 9e-18 | Click |
| 30 | 662365..662586 | hypothetical protein; Rsph17029_0647 | N/A | Click |
| 31 | 662633..662851 | hypothetical protein; Rsph17029_0648 | N/A | Click |
| 32 | 662920..663087 | hypothetical protein; Rsph17029_0649 | N/A | Click |
| 33 | 663084..663275 | XRE family transcriptional regulator; Rsph17029_0650 | N/A | Click |
| 34 | 663272..663949 | hypothetical protein; Rsph17029_0651 | N/A | Click |
| 35 | complement(663946..664152) | PHAGE_Xantho_Xp10: hypothetical protein Xp10p34; Rsph17029_0652; phage(gi32128446) | 1e-09 | Click |
| 36 | complement(664137..665516) | PHAGE_Strept_1: transferase; Rsph17029_0653; phage(gi39653711) | 7e-80 | Click |
| 37 | complement(665674..666009) | PHAGE_Burkho_phiE125: putative class I holin; Rsph17029_0654; phage(gi17975232) | 4e-18 | Click |
| 38 | complement(665979..666356) | hypothetical protein; Rsph17029_0655 | N/A | Click |
| 39 | complement(666484..666825) | hypothetical protein; Rsph17029_0656 | N/A | Click |
| 40 | complement(666825..667424) | hypothetical protein; Rsph17029_0657 | N/A | Click |
| 41 | complement(667424..667987) | hypothetical protein; Rsph17029_0658 | N/A | Click |
| 42 | complement(667984..668715) | PHAGE_Azospi_Cd: hypothetical protein APCd_gp15; Rsph17029_0659; phage(gi168495118) | 3e-08 | Click |
| 43 | complement(668712..669320) | PHAGE_Tetras_SI1: type II DNA modification methyltransferase; Rsph17029_0660; phage(gi472342268) | 4e-27 | Click |
| 44 | complement(669317..669925) | PHAGE_Sulfit_pCB2047_C: hypothetical protein; Rsph17029_0661; phage(gi472341800) | 3e-06 | Click |
| 45 | 669381..669393 | attR TCCGCCTCGGCGC | N/A | Click |
| 46 | complement(669925..670359) | PHAGE_Staphy_EW: ORF031; Rsph17029_0662; phage(gi66395837) | 3e-15 | Click |
Region 3, total : 12 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 665913..665924 | attL GCCAAGCCCAGC | N/A | Click |
| 2 | 672550..673890 | PHAGE_Burkho_BcepC6B: putative methyl transferase protein; Rsph17029_0665; phage(gi48697223) | 2e-75 | Click |
| 3 | 674053..675276 | PHAGE_Xantho_CP2: hypothetical protein; Rsph17029_0666; phage(gi448245209) | 3e-22 | Click |
| 4 | 675276..676211 | PHAGE_Mycoba_Halo: gp42; Rsph17029_0667; phage(gi109392329) | 3e-18 | Click |
| 5 | 676626..677741 | PHAGE_Myxoco_Mx8: hypothetical protein Mx8p81; Rsph17029_0668; phage(gi15320651) | 1e-19 | Click |
| 6 | 677738..677989 | hypothetical protein; Rsph17029_0669 | N/A | Click |
| 7 | 677986..678504 | PHAGE_Salmon_SPN3UB: Arc-like DNA binding domain protein; Rsph17029_0670; phage(gi423262396) | 6e-05 | Click |
| 8 | 678497..679057 | ribonuclease H; Rsph17029_0671 | N/A | Click |
| 9 | 679240..679572 | hypothetical protein; Rsph17029_0672 | N/A | Click |
| 10 | 679572..679886 | hypothetical protein; Rsph17029_0673 | N/A | Click |
| 11 | 680004..680297 | hypothetical protein; Rsph17029_0674 | N/A | Click |
| 12 | 680309..680599 | hypothetical protein; Rsph17029_0675 | N/A | Click |
| 13 | 680611..680622 | attR GCCAAGCCCAGC | N/A | Click |
| 14 | 680790..681881 | PHAGE_Rhodob_RcapNL: phage integrase/recombinase; Rsph17029_0676; phage(gi461474991) | 4e-18 | Click |
Region 4, total : 20 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1173796..1175040 | PHAGE_Strept_6: terminase large subunit; Rsph17029_1129; phage(gi93007440) | 4e-64 | Click |
| 2 | 1175113..1176285 | PHAGE_Marino_P12026: phage portal protein, HK97 family; Rsph17029_1130; phage(gi399528319) | 5e-19 | Click |
| 3 | 1176287..1176520 | hypothetical protein; Rsph17029_1131 | N/A | Click |
| 4 | 1176525..1177088 | PHAGE_Tetras_SI1: phage prohead protease; Rsph17029_1132; phage(gi472342256) | 9e-26 | Click |
| 5 | 1177187..1178350 | PHAGE_Salmon_ST64B: Major capsid protein precursor; Rsph17029_1133; phage(gi23505451) | 1e-67 | Click |
| 6 | 1178445..1179044 | PHAGE_Rhizob_3: p008; Rsph17029_1134; phage(gi195546539) | 9e-06 | Click |
| 7 | 1179044..1179379 | phage head-tail adaptor, putative; Rsph17029_1135 | N/A | Click |
| 8 | 1179376..1179774 | hypothetical protein; Rsph17029_1136 | N/A | Click |
| 9 | 1179812..1180225 | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Rsph17029_1137; phage(gi461474972) | 3e-19 | Click |
| 10 | 1180225..1180542 | hypothetical protein; Rsph17029_1138 | N/A | Click |
| 11 | 1180544..1180744 | hypothetical protein; Rsph17029_1139 | N/A | Click |
| 12 | 1180737..1181387 | PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; Rsph17029_1140; phage(gi428782128) | 4e-14 | Click |
| 13 | 1181397..1182029 | PHAGE_Roseob_1: putative glycoside hydrolase; Rsph17029_1141; phage(gi331028135) | 1e-44 | Click |
| 14 | 1182029..1182913 | PHAGE_Tetras_SI1: hypothetical protein; Rsph17029_1142; phage(gi472342235) | 7e-29 | Click |
| 15 | 1182910..1183350 | PHAGE_Rhodob_RcapMu: putative tail assembly protein; Rsph17029_1143; phage(gi356870891) | 2e-05 | Click |
| 16 | 1183350..1187240 | PHAGE_Tetras_SI1: hypothetical protein; Rsph17029_1144; phage(gi472342233) | 2e-33 | Click |
| 17 | 1187244..1187657 | hypothetical protein; Rsph17029_1145 | N/A | Click |
| 18 | 1187650..1188456 | serine O-acetyltransferase; Rsph17029_1146 | N/A | Click |
| 19 | complement(1188556..1189884) | PHAGE_Equid__4: large tegument protein; Rsph17029_1147; phage(gi9629749) | 8e-08 | Click |
| 20 | complement(1189895..1191286) | PHAGE_Synech_S_SM2: transketolase central region-containing protein; Rsph17029_1148; phage(gi326781943) | 1e-10 | Click |