Definition | Polaromonas naphthalenivorans CJ2 chromosome, complete genome. |
---|---|
Accession | NC_008781 |
Length | 4,410,291 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 18 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2398582..2401326) | PHAGE_Roseob_1: tail tape measure protein; Pnap_2248; phage(gi331028134) | 2e-51 | Click |
2 | complement(2401432..2402190) | PHAGE_Pseudo_JBD24: hypothetical protein; Pnap_2249; phage(gi448245091) | 2e-12 | Click |
3 | complement(2402222..2402641) | hypothetical protein; Pnap_2250 | N/A | Click |
4 | complement(2402642..2402950) | hypothetical protein; Pnap_2251 | N/A | Click |
5 | complement(2402989..2403351) | PHAGE_Stenot_S1: putative recombinase; Pnap_2252; phage(gi213163907) | 4e-19 | Click |
6 | complement(2403419..2405443) | PHAGE_Pseudo_F10: Putative Clp protease; Pnap_2253; phage(gi148912770) | 4e-133 | Click |
7 | complement(2405542..2407131) | PHAGE_Pseudo_F10: Putative portal protein; Pnap_2254; phage(gi148912769) | 3e-104 | Click |
8 | complement(2407141..2407365) | PHAGE_Pseudo_F10: hypothetical protein PPF10_gp003; Pnap_2255; phage(gi148912768) | 5e-13 | Click |
9 | complement(2407418..2407771) | hypothetical protein; Pnap_2256 | N/A | Click |
10 | complement(2407771..2409948) | PHAGE_Synech_S_CBS3: large terminase subunit; Pnap_2257; phage(gi331028008) | 2e-52 | Click |
11 | complement(2409948..2410454) | PHAGE_Entero_HK225: terminase small subunit nu1; Pnap_2258; phage(gi428782377) | 2e-06 | Click |
12 | complement(2410582..2411361) | PHAGE_Pseudo_F10: hypothetical protein PPF10_gp063; Pnap_2259; phage(gi148912828) | 2e-23 | Click |
13 | complement(2411367..2412200) | PHAGE_Xantho_CP2: hypothetical protein; Pnap_2260; phage(gi448245213) | 6e-08 | Click |
14 | complement(2412209..2412550) | hypothetical protein; Pnap_2261 | N/A | Click |
15 | complement(2412633..2413163) | PHAGE_Burkho_phiE125: hypothetical protein phiE125p56; Pnap_2262; phage(gi17975217) | 3e-07 | Click |
16 | 2413196..2413450 | hypothetical protein; Pnap_2263 | N/A | Click |
17 | complement(2413945..2414508) | PHAGE_Entero_c_1: prophage antirepressor; Pnap_2264; phage(gi428781783) | 2e-12 | Click |
18 | 2414590..2415114 | PHAGE_Entero_c_1: prophage repressor; Pnap_2265; phage(gi428781782) | 5e-12 | Click |
Region 2, total : 20 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2417451..2417467 | attL GCCGAATACGCCGCCGC | N/A | Click |
2 | 2425320..2426315 | PHAGE_Pelagi_HTVC019P: integrase; Pnap_2283; phage(gi460042383) | 5e-10 | Click |
3 | complement(2426393..2426467) | tRNA | N/A | Click |
4 | complement(2426499..2427221) | PHAGE_Vibrio_VP882: putative exonuclease; Pnap_2284; phage(gi126010887) | 6e-09 | Click |
5 | complement(2427248..2427586) | 2Fe-2S type ferredoxin, ISC system; Pnap_2285 | N/A | Click |
6 | complement(2427626..2429488) | PHAGE_Megavi_chiliensis: heat shock 70 kDa protein-like protein; Pnap_2286; phage(gi363540041) | 2e-100 | Click |
7 | complement(2429520..2430038) | co-chaperone Hsc20; Pnap_2287 | N/A | Click |
8 | complement(2430136..2430459) | iron-sulfur cluster assembly protein IscA; Pnap_2288 | N/A | Click |
9 | complement(2430496..2430897) | scaffold protein; Pnap_2289 | N/A | Click |
10 | complement(2430965..2432182) | cysteine desulfurase IscS; Pnap_2290 | N/A | Click |
11 | complement(2432256..2432792) | BadM/Rrf2 family transcriptional regulator; Pnap_2291 | N/A | Click |
12 | complement(2432803..2433054) | hypothetical protein; Pnap_2292 | N/A | Click |
13 | complement(2433142..2434104) | PHAGE_Bacill_BPS13: putative tail lysin 2; Pnap_2293; phage(gi410492620) | 2e-08 | Click |
14 | complement(2434112..2434363) | hypothetical protein; Pnap_2294 | N/A | Click |
15 | 2434578..2435495 | PHAGE_Macaci_4: EBNA-1; Pnap_2295; phage(gi51518045) | 1e-17 | Click |
16 | complement(2435604..2436269) | DSBA oxidoreductase; Pnap_2296 | N/A | Click |
17 | 2436399..2437757 | PHAGE_Clostr_st: hypothetical protein CST173; Pnap_2297; phage(gi80159859) | 5e-16 | Click |
18 | complement(2437771..2438265) | UspA domain-containing protein; Pnap_2298 | N/A | Click |
19 | 2438358..2439362 | PHAGE_Acanth_mimivirus: probable zinc-type alcohol dehydrogenase-like protein; Pnap_2299; phage(gi311977890) | 6e-15 | Click |
20 | 2438730..2438746 | attR GCCGAATACGCCGCCGC | N/A | Click |
21 | 2439538..2440191 | transport protein; Pnap_2300 | N/A | Click |
22 | 2440243..2440671 | PHAGE_Prochl_SSM4: heat shock protein; Pnap_2301; phage(gi61806343) | 9e-05 | Click |
23 | 2440683..2441414 | PHAGE_Plankt_PaV_LD: ABC transporter; Pnap_2302; phage(gi371496158) | 4e-34 | Click |
Region 3, total : 35 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3491706..3493382 | PHAGE_Aeromo_31: hypothetical protein PHG31p231; Pnap_3287; phage(gi66392035) | 6e-11 | Click |
2 | complement(3494949..3495995) | PHAGE_Burkho_phi52237: pbsx family phage portal protein; Pnap_3288; phage(gi72537722) | 9e-134 | Click |
3 | complement(3495995..3497785) | PHAGE_Burkho_KS14: gp35; Pnap_3289; phage(gi327198304) | 0.0 | Click |
4 | 3497851..3498771 | PHAGE_Burkho_KS14: gp34; Pnap_3290; phage(gi327198303) | 1e-62 | Click |
5 | 3498821..3499828 | PHAGE_Burkho_KS14: gp33; Pnap_3291; phage(gi327198302) | 4e-112 | Click |
6 | 3499834..3500616 | PHAGE_Burkho_KS14: gp32; Pnap_3292; phage(gi327198301) | 5e-45 | Click |
7 | 3500647..3501111 | PHAGE_Burkho_phiE202: gp48, phage head completion protein (GPL); Pnap_3293; phage(gi134288751) | 5e-31 | Click |
8 | 3501111..3501317 | PHAGE_Salmon_RE_2010: tail component protein; Pnap_3294; phage(gi418489702) | 8e-17 | Click |
9 | 3501321..3501539 | hypothetical protein; Pnap_3295 | N/A | Click |
10 | 3501536..3502048 | PHAGE_Burkho_DC1: lysozyme; Pnap_3296; phage(gi401723082) | 3e-50 | Click |
11 | 3502045..3502551 | PHAGE_Pseudo_YuA: putative holin; Pnap_3297; phage(gi162135142) | 4e-08 | Click |
12 | 3502553..3502981 | PHAGE_Burkho_KS14: gp24; Pnap_3298; phage(gi327198293) | 7e-28 | Click |
13 | 3502985..3503452 | PHAGE_Burkho_KS14: gp23; Pnap_3299; phage(gi327198292) | 3e-35 | Click |
14 | 3503525..3504178 | PHAGE_Burkho_KS14: gp22; Pnap_3300; phage(gi327198291) | 5e-40 | Click |
15 | 3504175..3504546 | PHAGE_Burkho_KS14: gp21; Pnap_3301; phage(gi327198290) | 1e-28 | Click |
16 | 3504543..3505430 | PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; Pnap_3302; phage(gi29143752) | 2e-68 | Click |
17 | 3505423..3506100 | PHAGE_Ralsto_phiRSA1: phage tail protein gpI; Pnap_3303; phage(gi145708096) | 7e-29 | Click |
18 | 3506107..3507903 | PHAGE_Entero_epsilon15: tail fiber; Pnap_3304; phage(gi30387399) | 6e-12 | Click |
19 | 3507908..3508645 | hypothetical protein; Pnap_3305 | N/A | Click |
20 | 3508784..3510235 | PROPHAGE_Salmon_Ty2: variable tail fiber protein; Pnap_3306; phage(gi29143754) | 6e-39 | Click |
21 | 3510241..3510531 | PHAGE_Synech_S_CRM01: tail fiber assembly-like protein; Pnap_3307; phage(gi333798178) | 1e-08 | Click |
22 | 3510544..3511719 | PHAGE_Burkho_KS14: gp16; Pnap_3308; phage(gi327198285) | 4e-149 | Click |
23 | 3511745..3512257 | PHAGE_Burkho_KS14: gp15; Pnap_3309; phage(gi327198284) | 4e-54 | Click |
24 | 3512319..3512561 | hypothetical protein; Pnap_3310 | N/A | Click |
25 | 3512593..3512949 | PHAGE_Burkho_KS14: gp13; Pnap_3311; phage(gi327198282) | 2e-22 | Click |
26 | 3512958..3513074 | PHAGE_Burkho_KS14: gp14; Pnap_3312; phage(gi327198283) | 1e-07 | Click |
27 | 3513109..3515700 | PHAGE_Burkho_KS14: gp12; Pnap_3313; phage(gi327198281) | 8e-176 | Click |
28 | 3515721..3516170 | PHAGE_Burkho_KS14: gp11; Pnap_3314; phage(gi327198280) | 9e-35 | Click |
29 | 3516176..3517210 | PHAGE_Burkho_KS14: gp10; Pnap_3315; phage(gi327198279) | 1e-83 | Click |
30 | complement(3517327..3517707) | PHAGE_Burkho_KS5: gp11; Pnap_3316; phage(gi327198009) | 8e-12 | Click |
31 | 3517738..3517989 | hypothetical protein; Pnap_3317 | N/A | Click |
32 | 3518384..3518809 | PHAGE_Burkho_phi52237: putative phage transcriptional activator Ogr/Delta; Pnap_3319; phage(gi72537689) | 7e-09 | Click |
33 | 3518806..3521694 | PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; Pnap_3320; phage(gi17313257) | 0.0 | Click |
34 | 3521742..3522446 | hypothetical protein; Pnap_3321 | N/A | Click |
35 | 3522468..3523019 | PHAGE_Escher_P13374: antirepressor; Pnap_3322; phage(gi410491647) | 1e-31 | Click |